Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc4092.1 Carica papaya HOM05D005083 ORTHO05D006310 5.6e-40 167.2 85 100.0
GSVIVG01032444001 Vitis vinifera HOM05D005083 ORTHO05D006310 9.3e-35 149.8 85 87.1
TWI36G0321 Tripterygium wilfordii HOM05D005083 ORTHO05D006310 3.0e-33 144.8 85 84.7
RcHm_v2.0_Chr3g0447481 Rosa chinensis HOM05D005083 ORTHO05D006310 8.7e-33 143.3 85 82.4
CANSAT54G2676 Cannabis sativa HOM05D005083 ORTHO05D006310 1.1e-32 142.9 85 82.4
Eucgr.B01438 Eucalyptus grandis HOM05D005083 ORTHO05D006310 1.1e-32 142.9 85 82.4
Duzib128G0478 Durio zibethinus HOM05D005083 ORTHO05D006310 1.9e-32 142.1 85 84.7
QL08p044788 Quercus lobata HOM05D005083 ORTHO05D006310 1.9e-32 142.1 85 82.4
Potri.010G180700 Populus trichocarpa HOM05D005083 ORTHO05D006310 2.5e-32 141.7 85 80.0
PSO832G1645 Papaver somniferum HOM05D005083 ORTHO05D006310 4.3e-32 141.0 85 81.2
Sc16g0010610 Simmondsia chinensis HOM05D005083 ORTHO05D006310 4.3e-32 141.0 85 82.4
EL10Ac4g10018 Beta vulgaris HOM05D005083 ORTHO05D006310 5.6e-32 140.6 85 82.4
MBI18_g11247_MAGBIO Magnolia biondii HOM05D005083 ORTHO05D006310 5.6e-32 140.6 85 82.4
MBI18_g24480_MAGBIO Magnolia biondii HOM05D005083 ORTHO05D006310 5.6e-32 140.6 85 82.4
PGR119G1162 Punica granatum HOM05D005083 ORTHO05D006310 5.6e-32 140.6 85 82.4
Dinv15379 Davidia involucrata HOM05D005083 ORTHO05D006310 7.4e-32 140.2 85 82.4
BcaB01g05202 Brassica carinata HOM05D005083 ORTHO05D006310 1.3e-31 139.4 85 82.4
C03p09650 Brassica napus HOM05D001138 ORTHO05D006310 1.3e-31 139.4 85 82.4
Cfa006235 Carpinus fangiana HOM05D005083 ORTHO05D006310 1.3e-31 139.4 85 82.4
CiPaw.07G085600 Carya illinoinensis HOM05D005083 ORTHO05D006310 1.3e-31 139.4 85 82.4
Haze_04595 Corylus avellana HOM05D005083 ORTHO05D006310 1.3e-31 139.4 85 82.4
Gohir.A01G108100 Gossypium hirsutum HOM05D005083 ORTHO05D006310 1.3e-31 139.4 85 82.4
Solyc02g081460.4 Solanum lycopersicum HOM05D005083 ORTHO05D006310 1.3e-31 139.4 85 77.6
Sopen02g026100 Solanum pennellii HOM05D005083 ORTHO05D006310 1.3e-31 139.4 85 77.6
PGSC0003DMG400019714 Solanum tuberosum HOM05D005083 ORTHO05D006310 1.3e-31 139.4 85 77.6
PSO210G3440 Papaver somniferum HOM05D005083 ORTHO05D006310 1.6e-31 139.0 85 80.0
TAR375G0465 Trochodendron aralioides HOM05D005083 ORTHO05D006310 1.6e-31 139.0 85 81.2
CARHR195800 Cardamine hirsuta HOM05D005083 ORTHO05D006310 2.1e-31 138.7 85 81.2
FAN02G1711 Fragaria x ananassa HOM05D005083 ORTHO05D006310 2.1e-31 138.7 85 80.0
Gorai.002G119900 Gossypium raimondii HOM05D005083 ORTHO05D006310 2.1e-31 138.7 85 82.4
ClCG10G004080 Citrullus lanatus HOM05D005083 ORTHO05D006310 2.8e-31 138.3 85 80.0
Prupe.7G036600 Prunus persica HOM05D005083 ORTHO05D006310 2.8e-31 138.3 85 81.2
Hund07372 Selenicereus undatus HOM05D005083 ORTHO05D006310 2.8e-31 138.3 85 80.0
CSS0033222 Camellia sinensis var. sinensis HOM05D005083 ORTHO05D006310 3.7e-31 137.9 85 78.8
CSS0048819 Camellia sinensis var. sinensis HOM05D005083 ORTHO05D006310 3.7e-31 137.9 85 78.8
Thhalv10012868m.g Eutrema salsugineum HOM05D005083 ORTHO05D006310 3.7e-31 137.9 85 80.0
FvH4_6g00120 Fragaria vesca HOM05D005083 ORTHO05D006310 3.7e-31 137.9 85 80.0
FAN09G1831 Fragaria x ananassa HOM05D005083 ORTHO05D006310 3.7e-31 137.9 85 80.0
Gohir.D01G094500 Gossypium hirsutum HOM05D005083 ORTHO05D006310 4.8e-31 137.5 85 81.2
Sp6g26810 Schrenkiella parvula HOM05D005083 ORTHO05D006310 4.8e-31 137.5 85 81.2
VMungo0331G1409 Vigna mungo HOM05D005083 ORTHO05D006310 4.8e-31 137.5 85 80.0
Ah.06g195270 Amaranthus hybridus HOM05D005083 ORTHO05D006310 6.2e-31 137.1 85 81.2
Phvul.010G031700 Phaseolus vulgaris HOM05D005083 ORTHO05D006310 6.2e-31 137.1 85 78.8
BcaB01g04935 Brassica carinata HOM05D005083 ORTHO05D006310 8.1e-31 136.7 85 80.0
MELO3C014078.2 Cucumis melo HOM05D005083 ORTHO05D006310 8.1e-31 136.7 85 78.8
CsaV3_3G003930 Cucumis sativus L. HOM05D005083 ORTHO05D006310 8.1e-31 136.7 85 78.8
Nitab4.5_0000842g0030 Nicotiana tabacum HOM05D005083 ORTHO05D006310 8.1e-31 136.7 85 77.6
Nitab4.5_0002233g0090 Nicotiana tabacum HOM05D005083 ORTHO05D006310 8.1e-31 136.7 85 77.6
THA.LOC104820850 Tarenaya hassleriana HOM05D005083 ORTHO05D006310 8.1e-31 136.7 85 81.2
AT5G17410 Arabidopsis thaliana HOM05D005083 ORTHO05D006310 1.1e-30 136.3 85 80.0
arahy.Tifrunner.gnm1.ann1.1T2QZ7 Arachis hypogaea HOM05D005083 ORTHO05D006310 1.1e-30 136.3 85 78.8
Sed0024795 Sechium edule HOM05D005083 ORTHO05D006310 1.1e-30 136.3 85 77.6
AL6G28480 Arabidopsis lyrata HOM05D005083 ORTHO05D006310 1.4e-30 136.0 85 78.8
Carub.0006s1563 Capsella rubella HOM05D005083 ORTHO05D006310 1.4e-30 136.0 85 80.0
CAN.G809.91 Capsicum annuum HOM05D005083 ORTHO05D006310 1.4e-30 136.0 85 76.5
AUR62006625 Chenopodium quinoa HOM05D005083 ORTHO05D006310 1.4e-30 136.0 85 81.2
Nitab4.5_0001308g0170 Nicotiana tabacum HOM05D005083 ORTHO05D006310 1.4e-30 136.0 85 77.6
arahy.Tifrunner.gnm1.ann1.PCAY5Y Arachis hypogaea HOM05D005083 ORTHO05D006310 2.4e-30 135.2 85 77.6
AUR62000278 Chenopodium quinoa HOM05D005083 ORTHO05D006310 3.1e-30 134.8 85 80.0
Os04g0501700 Oryza sativa ssp. japonica HOM05D005083 ORTHO05D006310 3.1e-30 134.8 85 76.5
Rhsim05G0167600 Rhododendron simsii HOM05D005083 ORTHO05D006310 3.1e-30 134.8 85 77.6
A03p08290 Brassica napus HOM05D001138 ORTHO05D006310 4.0e-30 134.4 90 77.8
MD14G1089300 Malus domestica HOM05D005083 ORTHO05D006310 4.0e-30 134.4 85 76.5
CSS0010526 Camellia sinensis var. sinensis HOM05D005083 ORTHO05D006310 6.9e-30 133.7 85 76.5
Zm00001eb425980 Zea mays HOM05D005083 ORTHO05D006310 9.0e-30 133.3 85 74.1
Aqoxy3G04197 Aquilegia oxysepala HOM05D005083 ORTHO05D006310 1.2e-29 132.9 85 75.3
MSTRG.8186 Avicennia marina HOM05D005083 ORTHO05D006310 1.2e-29 132.9 85 76.5
Lalb_Chr03g0041081 Lupinus albus HOM05D005083 ORTHO05D006310 1.2e-29 132.9 85 75.3
Lj4A702T41 Lonicera japonica HOM05D005083 ORTHO05D006310 2.0e-29 132.1 85 76.5
Lj1g0009175 Lotus japonicus HOM05D005083 ORTHO05D006310 2.0e-29 132.1 85 75.3
Actinidia06798 Actinidia chinensis HOM05D005083 ORTHO05D006310 2.6e-29 131.7 85 76.5
Oeu062030.2 Olea europaea HOM05D005083 ORTHO05D006310 2.6e-29 131.7 85 75.3
Peaxi162Scf00253g00621 Petunia axillaris HOM05D005083 ORTHO05D006310 3.4e-29 131.3 85 72.9
Medtr8g011450 Medicago truncatula HOM05D005083 ORTHO05D006310 5.8e-29 130.6 86 75.6
Glyma.16G082900 Glycine max HOM05D005083 ORTHO05D006310 7.6e-29 130.2 85 75.3
ECA238G2964 Erigeron canadensis HOM05D005083 ORTHO05D006310 9.9e-29 129.8 85 72.9
Atru.chr12.1671 Acer truncatum HOM05D005083 ORTHO05D006310 1.3e-28 129.4 91 75.8
Ciclev10004486m.g Citrus clementina HOM05D005083 ORTHO05D006310 1.3e-28 129.4 92 75.0
BraA03t10156Z Brassica rapa HOM05D005083 ORTHO05D006310 1.7e-28 129.0 101 69.3
Cc09_g04250 Coffea canephora HOM05D005083 ORTHO05D006310 1.7e-28 129.0 85 77.6
C09p59750 Brassica napus HOM05D005083 ORTHO05D006310 2.9e-28 128.3 85 78.8
Glyma.03G090100 Glycine max HOM05D005083 ORTHO05D006310 2.9e-28 128.3 85 74.1
Ca_23185_v3 Cicer arietinum L. HOM05D005083 ORTHO05D006310 4.9e-28 127.5 86 74.4
Ca_30805_v3 Cicer arietinum L. HOM05D005083 ORTHO05D006310 4.9e-28 127.5 86 74.4
Lsat_1_v5_gn_2_27601 Lactuca sativa HOM05D005083 ORTHO05D006310 4.9e-28 127.5 85 74.1
HanXRQChr14g0433021 Helianthus annuus HOM05D005083 ORTHO05D006310 8.4e-28 126.7 85 75.3
TPR.G28978 Trifolium pratense HOM05D005083 ORTHO05D006310 1.4e-27 125.9 86 73.3
Atru.chr4.1877 Acer truncatum HOM05D005083 ORTHO05D006310 4.2e-27 124.4 91 72.5
SGA_v2.0_scaffold122G33218 Striga asiatica HOM05D005083 ORTHO05D006310 4.2e-27 124.4 85 70.6
Aa31LG11G12310 Aethionema arabicum HOM05D005083 ORTHO05D006310 1.6e-26 122.5 114 60.5
BolC9t58815H Brassica oleracea HOM05D005083 ORTHO05D006310 2.1e-26 122.1 99 67.7
Nn1g09878 Nelumbo nucifera HOM05D005083 ORTHO05D006310 3.5e-26 121.3 85 72.9
SHI07636 Sapria himalayana HOM05D005083 ORTHO05D006310 3.5e-26 121.3 85 69.4
CDE02G0214 Ceratophyllum demersum HOM05D005083 ORTHO05D006310 6.0e-26 120.6 85 70.6
CDE08G0008 Ceratophyllum demersum HOM05D005083 ORTHO05D006310 6.0e-26 120.6 85 69.4
ATR1096G007 Amborella trichopoda HOM05D005083 ORTHO05D006310 1.0e-25 119.8 85 64.7
HanXRQChr03g0062031 Helianthus annuus HOM05D005083 ORTHO05D006310 1.8e-25 119.0 92 69.6
Psat4g206560 Pisum sativum HOM05D005083 ORTHO05D006310 3.0e-25 118.2 79 74.7
BolC3t13463H Brassica oleracea HOM05D005083 ORTHO05D006310 1.9e-24 115.5 85 71.8
SEGI_28464 Sequoiadendron giganteum HOM05D005083 ORTHO05D006310 4.3e-24 114.4 84 65.5
SEGI_29727 Sequoiadendron giganteum HOM05D005083 ORTHO05D006310 4.3e-24 114.4 84 65.5
HPP92_018347 Vanilla planifolia HOM05D005083 ORTHO05D006310 7.4e-24 113.6 85 65.9
SMO361G0655 Selaginella moellendorffii HOM05D005083 ORTHO05D006310 1.5e-21 105.9 84 59.5
Mapoly0036s0123 Marchantia polymorpha HOM05D005083 ORTHO05D006310 2.6e-21 105.1 84 58.3
Pp3c23_1190 Physcomitrium patens HOM05D005083 ORTHO05D006310 4.2e-19 97.8 85 52.9
Pp3c8_20000 Physcomitrium patens HOM05D005083 ORTHO05D006310 6.0e-18 94.0 85 51.8
AagrBONN_evm.TU.Sc2ySwM_228.1094 Anthoceros agrestis HOM05D005083 ORTHO05D006310 7.9e-18 93.6 84 52.4
COL.COLO4_36604 Corchorus olitorius HOM05D005083 ORTHO05D006310 6.7e-17 90.5 88 59.1
Thecc.05G188600 Theobroma cacao HOM05D005083 ORTHO05D006310 1.1e-16 89.7 50 88.0
Pp3c13_20560 Physcomitrium patens HOM05D005083 ORTHO05D006310 3.4e-13 78.2 84 41.7
Pp3c13_20568 Physcomitrium patens HOM05D005083 ORTHO05D006310 3.4e-13 78.2 84 41.7
Lsat_1_v5_gn_1_124700 Lactuca sativa HOM05D005083 ORTHO05D006310 2.9e-12 75.1 46 76.1
BraA10t44257Z Brassica rapa HOM05D005083 ORTHO05D006310 1.1e-11 73.2 85 50.6
Manes.13G001400 Manihot esculenta HOM05D005083 ORTHO05D006310 1.8e-09 65.9 56 58.9
Lsat_1_v5_gn_0_22860 Lactuca sativa HOM05D005083 ORTHO05D006310 9.7e-08 60.1 54 55.6
Lsat_1_v5_gn_8_121940 Lactuca sativa HOM05D005083 ORTHO05D006310 4.8e-07 57.8 72 45.8
Lsat_1_v5_gn_3_76880 Lactuca sativa HOM05D005083 ORTHO05D006310 6.3e-07 57.4 41 65.9
Migut.F01835 Erythranthe guttata HOM05D005083 ORTHO05D006310 8.2e-07 57.0 36 72.2
CBR_g50761 Chara braunii HOM05D005083 ORTHO05D006310 3.1e-06 55.1 43 53.5
Lsat_1_v5_gn_4_10921 Lactuca sativa HOM05D005083 ORTHO05D006310 3.1e-06 55.1 42 61.9


User provided reference genes

Program Settings