Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc4.145 Carica papaya HOM05D005705 ORTHO05D007152 1.3e-43 179.1 78 100.0
QL10p001835 Quercus lobata HOM05D005705 ORTHO05D007152 4.1e-29 131.0 78 74.4
Ciclev10031733m.g Citrus clementina HOM05D005705 ORTHO05D007152 5.4e-29 130.6 75 77.3
FAN08G2466 Fragaria x ananassa HOM05D005705 ORTHO05D007152 2.9e-27 124.8 79 69.6
FAN13G0195 Fragaria x ananassa HOM05D005705 ORTHO05D007152 2.9e-27 124.8 79 69.6
FAN18G0862 Fragaria x ananassa HOM05D005705 ORTHO05D007152 2.9e-27 124.8 79 69.6
Atru.chr6.1874 Acer truncatum HOM05D005705 ORTHO05D007152 8.5e-27 123.2 78 70.5
Dinv11204 Davidia involucrata HOM05D005705 ORTHO05D007152 1.1e-26 122.9 81 66.7
CSS0038740 Camellia sinensis var. sinensis HOM05D005705 ORTHO05D007152 5.5e-26 120.6 81 66.7
Nn4g22220 Nelumbo nucifera HOM05D005705 ORTHO05D007152 5.5e-26 120.6 82 67.1
Nn4g22223 Nelumbo nucifera HOM05D005705 ORTHO05D007152 5.5e-26 120.6 82 67.1
Gohir.D03G113075 Gossypium hirsutum HOM05D005705 ORTHO05D007152 2.1e-25 118.6 77 66.2
Gohir.D03G113100 Gossypium hirsutum HOM05D005705 ORTHO05D007152 2.1e-25 118.6 77 66.2
Gorai.003G119300 Gossypium raimondii HOM05D005705 ORTHO05D007152 2.1e-25 118.6 77 66.2
MD14G1151500 Malus domestica HOM05D005705 ORTHO05D007152 3.6e-25 117.9 80 68.8
THA.LOC104811568 Tarenaya hassleriana HOM05D005705 ORTHO05D007152 3.6e-25 117.9 71 69.0
Migut.D01284 Erythranthe guttata HOM05D005705 ORTHO05D007152 4.7e-25 117.5 75 73.3
Gohir.A03G053840 Gossypium hirsutum HOM05D005705 ORTHO05D007152 4.7e-25 117.5 77 64.9
MD06G1136700 Malus domestica HOM05D005705 ORTHO05D007152 4.7e-25 117.5 80 67.5
RcHm_v2.0_Chr7g0189351 Rosa chinensis HOM05D005705 ORTHO05D007152 4.7e-25 117.5 79 65.8
Thecc.03G135500 Theobroma cacao HOM05D005705 ORTHO05D007152 6.1e-25 117.1 78 67.9
SGA_v2.0_scaffold37G14637 Striga asiatica HOM05D005705 ORTHO05D007152 8.0e-25 116.7 73 74.0
Ca_16064_v3 Cicer arietinum L. HOM05D005705 ORTHO05D007152 1.0e-24 116.3 79 65.8
Glyma.06G167100 Glycine max HOM05D005705 ORTHO05D007152 1.0e-24 116.3 80 63.8
VMungo1309G0782 Vigna mungo HOM05D005705 ORTHO05D007152 1.0e-24 116.3 78 65.4
Aqoxy3G01676 Aquilegia oxysepala HOM05D005705 ORTHO05D007152 1.8e-24 115.5 69 69.6
Oeu061128.1 Olea europaea HOM05D005705 ORTHO05D007152 1.8e-24 115.5 80 66.2
Manes.06G123000 Manihot esculenta HOM05D005705 ORTHO05D007152 2.3e-24 115.2 77 67.5
CAN.G732.1 Capsicum annuum HOM05D005705 ORTHO05D007152 3.0e-24 114.8 79 64.6
FAN04G2238 Fragaria x ananassa HOM05D005705 ORTHO05D007152 5.2e-24 114.0 79 64.6
Solyc03g097550.3 Solanum lycopersicum HOM05D005705 ORTHO05D007152 6.8e-24 113.6 77 64.9
Sopen03g028300 Solanum pennellii HOM05D005705 ORTHO05D007152 6.8e-24 113.6 77 64.9
GSVIVG01008591001 Vitis vinifera HOM05D005705 ORTHO05D007152 6.8e-24 113.6 85 63.5
Aa31LG3G7650 Aethionema arabicum HOM05D005705 ORTHO05D007152 8.8e-24 113.2 52 84.6
MSTRG.4614 Avicennia marina HOM05D005705 ORTHO05D007152 1.2e-23 112.8 80 62.5
CiPaw.11G003500 Carya illinoinensis HOM05D005705 ORTHO05D007152 1.2e-23 112.8 79 64.6
Duzib084G0308 Durio zibethinus HOM05D005705 ORTHO05D007152 1.2e-23 112.8 77 62.3
Medtr3g098940 Medicago truncatula HOM05D005705 ORTHO05D007152 1.2e-23 112.8 79 63.3
TPR.G35256 Trifolium pratense HOM05D005705 ORTHO05D007152 1.2e-23 112.8 79 60.8
Cc08_g11650 Coffea canephora HOM05D005705 ORTHO05D007152 1.5e-23 112.5 84 59.5
Eucgr.F01610 Eucalyptus grandis HOM05D005705 ORTHO05D007152 1.5e-23 112.5 81 61.7
Sabra15G0121700 Salix brachista HOM05D005705 ORTHO05D007152 1.5e-23 112.5 79 63.3
CANSAT80G2532 Cannabis sativa HOM05D005705 ORTHO05D007152 2.0e-23 112.1 74 67.6
CARHR256910 Cardamine hirsuta HOM05D005705 ORTHO05D007152 2.0e-23 112.1 66 69.7
Psat5g053040 Pisum sativum HOM05D005705 ORTHO05D007152 2.0e-23 112.1 79 62.0
A02p12470 Brassica napus HOM05D005705 ORTHO05D007152 2.6e-23 111.7 66 68.2
arahy.Tifrunner.gnm1.ann1.5ZS0BP Arachis hypogaea HOM05D005705 ORTHO05D007152 3.4e-23 111.3 79 63.3
arahy.Tifrunner.gnm1.ann1.U15GQW Arachis hypogaea HOM05D005705 ORTHO05D007152 3.4e-23 111.3 79 63.3
Lj1g0017194 Lotus japonicus HOM05D005705 ORTHO05D007152 3.4e-23 111.3 77 63.6
Lalb_Chr08g0237371 Lupinus albus HOM05D005705 ORTHO05D007152 3.4e-23 111.3 79 63.3
Nitab4.5_0001332g0070 Nicotiana tabacum HOM05D005705 ORTHO05D007152 3.4e-23 111.3 80 61.2
Sed0013194 Sechium edule HOM05D005705 ORTHO05D007152 4.4e-23 110.9 79 63.3
AL8G25400 Arabidopsis lyrata HOM05D005705 ORTHO05D007152 5.7e-23 110.5 66 68.2
BcaC01g06077 Brassica carinata HOM05D005705 ORTHO05D007152 5.7e-23 110.5 66 68.2
C02p20570 Brassica napus HOM05D005705 ORTHO05D007152 5.7e-23 110.5 66 68.2
BolC2t08194H Brassica oleracea HOM05D005705 ORTHO05D007152 5.7e-23 110.5 66 68.2
Lsat_1_v5_gn_1_32681 Lactuca sativa HOM05D005705 ORTHO05D007152 5.7e-23 110.5 78 61.5
Peaxi162Scf00516g00214 Petunia axillaris HOM05D005705 ORTHO05D007152 5.7e-23 110.5 80 61.2
BraA02t06310Z Brassica rapa HOM05D005705 ORTHO05D007152 7.5e-23 110.2 66 66.7
Eucgr.K02692 Eucalyptus grandis HOM05D005705 ORTHO05D007152 7.5e-23 110.2 77 61.0
Thhalv10013761m.g Eutrema salsugineum HOM05D005705 ORTHO05D007152 7.5e-23 110.2 66 68.2
Sp6g13350 Schrenkiella parvula HOM05D005705 ORTHO05D007152 7.5e-23 110.2 66 68.2
Phvul.009G162600 Phaseolus vulgaris HOM05D005705 ORTHO05D007152 9.8e-23 109.8 79 63.3
Potri.015G101300 Populus trichocarpa HOM05D005705 ORTHO05D007152 9.8e-23 109.8 79 62.0
Carub.0008s1118 Capsella rubella HOM05D005705 ORTHO05D007152 1.3e-22 109.4 66 66.7
Nitab4.5_0003383g0010 Nicotiana tabacum HOM05D005705 ORTHO05D007152 1.3e-22 109.4 79 63.3
Prupe.5G146600 Prunus persica HOM05D005705 ORTHO05D007152 1.3e-22 109.4 57 77.2
ClCG06G018130 Citrullus lanatus HOM05D005705 ORTHO05D007152 1.7e-22 109.0 79 63.3
Eucgr.K02687 Eucalyptus grandis HOM05D005705 ORTHO05D007152 1.7e-22 109.0 77 61.0
ATR0582G303 Amborella trichopoda HOM05D005705 ORTHO05D007152 2.2e-22 108.6 62 66.1
AT5G51140 Arabidopsis thaliana HOM05D005705 ORTHO05D007152 2.2e-22 108.6 66 66.7
BraA03t10919Z Brassica rapa HOM05D005705 ORTHO05D007152 2.2e-22 108.6 61 73.8
TWI14G0152 Tripterygium wilfordii HOM05D005705 ORTHO05D007152 2.2e-22 108.6 53 77.4
BcaC01g06097 Brassica carinata HOM05D005705 ORTHO05D007152 2.8e-22 108.2 61 72.1
C03p19170 Brassica napus HOM05D005705 ORTHO05D007152 2.8e-22 108.2 61 72.1
BolC3t14305H Brassica oleracea HOM05D005705 ORTHO05D007152 2.8e-22 108.2 61 72.1
ECA247G0704 Erigeron canadensis HOM05D005705 ORTHO05D007152 3.7e-22 107.8 77 59.7
Eucgr.K02697 Eucalyptus grandis HOM05D005705 ORTHO05D007152 3.7e-22 107.8 77 61.0
Hund10107 Selenicereus undatus HOM05D005705 ORTHO05D007152 3.7e-22 107.8 78 62.8
A03p16280 Brassica napus HOM05D005705 ORTHO05D007152 4.9e-22 107.5 61 72.1
CsaV3_1G000320 Cucumis sativus L. HOM05D005705 ORTHO05D007152 6.3e-22 107.1 79 60.8
PGR083G0448 Punica granatum HOM05D005705 ORTHO05D007152 6.3e-22 107.1 78 61.5
EL10Ac5g11353 Beta vulgaris HOM05D005705 ORTHO05D007152 8.3e-22 106.7 78 61.5
Ah.11g046430 Amaranthus hybridus HOM05D005705 ORTHO05D007152 1.8e-21 105.5 77 59.7
HanXRQChr02g0034161 Helianthus annuus HOM05D005705 ORTHO05D007152 2.4e-21 105.1 53 75.5
AUR62034819 Chenopodium quinoa HOM05D005705 ORTHO05D007152 3.1e-21 104.8 78 57.7
Eucgr.B00082 Eucalyptus grandis HOM05D005705 ORTHO05D007152 3.1e-21 104.8 74 63.5
PSO017G1135 Papaver somniferum HOM05D005705 ORTHO05D007152 3.1e-21 104.8 52 76.9
DCAR_026236 Daucus carota HOM05D005705 ORTHO05D007152 7.0e-21 103.6 73 60.3
AUR62029555 Chenopodium quinoa HOM05D005705 ORTHO05D007152 9.1e-21 103.2 78 57.7
PSO478G3581 Papaver somniferum HOM05D005705 ORTHO05D007152 9.1e-21 103.2 49 79.6
HPP92_015136 Vanilla planifolia HOM05D005705 ORTHO05D007152 1.6e-20 102.4 64 64.1
BcaC03g14622 Brassica carinata HOM05D005705 ORTHO05D007152 2.7e-20 101.7 62 67.7
ECA247G2912 Erigeron canadensis HOM05D005705 ORTHO05D007152 3.5e-20 101.3 49 77.6
Zm00001eb241970 Zea mays HOM05D005705 ORTHO05D007152 5.9e-20 100.5 63 65.1
Eucgr.K02689 Eucalyptus grandis HOM05D005705 ORTHO05D007152 2.9e-19 98.2 75 57.3
PGR044G0296 Punica granatum HOM05D005705 ORTHO05D007152 2.5e-18 95.1 72 54.2
Pp3c10_5680 Physcomitrium patens HOM05D005705 ORTHO05D007152 3.3e-18 94.7 49 67.3
Pp3c10_5730 Physcomitrium patens HOM05D005705 ORTHO05D007152 3.3e-18 94.7 49 67.3
Mapoly0190s0007 Marchantia polymorpha HOM05D005705 ORTHO05D007152 5.2e-16 87.4 58 58.6
CBR_g48327 Chara braunii HOM05D005705 ORTHO05D007152 1.2e-15 86.3 48 60.4
RcHm_v2.0_Chr7g0189401 Rosa chinensis HOM05D005705 ORTHO05D007152 4.9e-14 80.9 78 52.6
Haze_07188 Corylus avellana HOM05D005705 ORTHO05D007152 5.0e-11 70.9 30 83.3
vmacro19145 Vaccinium macrocarpon HOM05D005705 ORTHO05D007152 6.6e-11 70.5 110 40.0
Eucgr.B00079 Eucalyptus grandis HOM05D005705 ORTHO05D007152 1.1e-10 69.7 60 55.0
CAN.G1841.1 Capsicum annuum HOM05D000176 ORTHO05D014553 1.3e-06 56.2 40 57.5


User provided reference genes

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