Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc39.73 Carica papaya HOM05D006877 ORTHO05D008735 5.1e-215 751.5 621 100.0
QL09p024038 Quercus lobata HOM05D006877 ORTHO05D008735 1.2e-86 325.1 590 69.5
CSS0011113 Camellia sinensis var. sinensis HOM05D006877 ORTHO05D008735 2.9e-85 320.5 581 67.0
CANSAT21G1458 Cannabis sativa HOM05D006877 ORTHO05D008735 5.7e-81 306.2 593 55.1
Atru.chr12.1962 Acer truncatum HOM05D006877 ORTHO05D008735 8.2e-80 302.4 270 58.9
Duzib106G0107 Durio zibethinus HOM05D006877 ORTHO05D008735 9.0e-79 298.9 269 55.8
Lj1A1033T71 Lonicera japonica HOM05D006877 ORTHO05D008735 3.4e-78 297.0 632 48.6
Ciclev10018634m.g Citrus clementina HOM05D006877 ORTHO05D008735 6.5e-77 292.7 270 57.0
Thecc.05G213300 Theobroma cacao HOM05D006877 ORTHO05D008735 9.4e-76 288.9 269 55.0
Manes.09G127200 Manihot esculenta HOM05D006877 ORTHO05D008735 3.9e-74 283.5 270 56.3
TAR381G0744 Trochodendron aralioides HOM05D006877 ORTHO05D008735 2.5e-73 280.8 273 55.7
Dinv17258 Davidia involucrata HOM05D006877 ORTHO05D008735 4.3e-73 280.0 268 57.8
COL.COLO4_11806 Corchorus olitorius HOM05D006877 ORTHO05D008735 2.8e-72 277.3 268 54.5
Gohir.D08G242601 Gossypium hirsutum HOM05D006877 ORTHO05D008735 1.1e-71 275.4 269 52.4
Gorai.004G258300 Gossypium raimondii HOM05D006877 ORTHO05D008735 1.1e-71 275.4 269 52.4
Prupe.2G325900 Prunus persica HOM05D006877 ORTHO05D008735 1.1e-71 275.4 270 52.6
Potri.019G049400 Populus trichocarpa HOM05D006877 ORTHO05D008735 5.3e-71 273.1 270 54.1
Nn1g01910 Nelumbo nucifera HOM05D006877 ORTHO05D008735 6.9e-71 272.7 270 51.9
MSTRG.8575 Avicennia marina HOM05D006877 ORTHO05D008735 9.1e-71 272.3 589 60.6
Haze_00425 Corylus avellana HOM05D006877 ORTHO05D008735 9.1e-71 272.3 282 53.5
Gohir.A08G221900 Gossypium hirsutum HOM05D006877 ORTHO05D008735 1.5e-70 271.6 269 51.7
FvH4_7g33960 Fragaria vesca HOM05D006877 ORTHO05D008735 4.5e-70 270.0 270 50.7
Sabra19G0059000 Salix brachista HOM05D006877 ORTHO05D008735 1.3e-69 268.5 270 54.1
Oeu060385.2 Olea europaea HOM05D006877 ORTHO05D008735 2.2e-69 267.7 270 54.4
RcHm_v2.0_Chr1g0384191 Rosa chinensis HOM05D006877 ORTHO05D008735 2.2e-69 267.7 270 50.0
Eucgr.A02969 Eucalyptus grandis HOM05D006877 ORTHO05D008735 2.7e-67 260.8 267 52.4
Hma1.2p1_0758F.1_g213710 Hydrangea macrophylla HOM05D006877 ORTHO05D008735 7.9e-67 259.2 264 53.0
TWI39G0452 Tripterygium wilfordii HOM05D006877 ORTHO05D008735 1.8e-66 258.1 270 52.6
DCAR_020407 Daucus carota HOM05D006877 ORTHO05D008735 6.7e-66 256.1 281 50.2
PGSC0003DMG400003143 Solanum tuberosum HOM05D006877 ORTHO05D008735 4.4e-65 253.4 273 51.3
Lj4g0001495 Lotus japonicus HOM05D006877 ORTHO05D008735 1.3e-64 251.9 273 49.5
GSVIVG01024409001 Vitis vinifera HOM05D006877 ORTHO05D008735 1.7e-64 251.5 268 53.0
Phvul.003G065400 Phaseolus vulgaris HOM05D006877 ORTHO05D008735 6.3e-64 249.6 274 52.2
FAN01G1958 Fragaria x ananassa HOM05D006877 ORTHO05D008735 8.2e-64 249.2 317 43.8
CiPaw.05G220200 Carya illinoinensis HOM05D006877 ORTHO05D008735 1.8e-63 248.1 270 51.9
THA.LOC104821701 Tarenaya hassleriana HOM05D006877 ORTHO05D008735 1.8e-63 248.1 267 50.6
Sopen03g027750 Solanum pennellii HOM05D006877 ORTHO05D008735 3.1e-63 247.3 271 50.6
FAN10G2126 Fragaria x ananassa HOM05D006877 ORTHO05D008735 5.3e-63 246.5 317 43.8
Peaxi162Scf00745g00840 Petunia axillaris HOM05D006877 ORTHO05D008735 5.3e-63 246.5 271 50.6
VMungo0251G1190 Vigna mungo HOM05D006877 ORTHO05D008735 7.0e-63 246.1 273 51.3
Actinidia18704 Actinidia chinensis HOM05D006877 ORTHO05D008735 1.5e-62 245.0 267 50.9
Glyma.08G106500 Glycine max HOM05D006877 ORTHO05D008735 4.5e-62 243.4 273 49.8
Lalb_Chr13g0294611 Lupinus albus HOM05D006877 ORTHO05D008735 1.0e-61 242.3 272 49.3
Migut.F00097 Erythranthe guttata HOM05D006877 ORTHO05D008735 1.3e-61 241.9 592 53.0
CARHR185880 Cardamine hirsuta HOM05D006877 ORTHO05D008735 2.9e-61 240.7 260 51.2
Nitab4.5_0000021g0490 Nicotiana tabacum HOM05D006877 ORTHO05D008735 2.9e-61 240.7 271 50.2
Cc03_g15580 Coffea canephora HOM05D006877 ORTHO05D008735 3.8e-61 240.4 595 59.7
Carub.0006s2526 Capsella rubella HOM05D006877 ORTHO05D008735 6.5e-61 239.6 269 50.2
Aa31LG11G9010 Aethionema arabicum HOM05D006877 ORTHO05D008735 1.9e-60 238.0 259 51.0
FAN03G2267 Fragaria x ananassa HOM05D006877 ORTHO05D008735 4.2e-60 236.9 281 47.3
AT5G27270 Arabidopsis thaliana HOM05D006877 ORTHO05D008735 7.2e-60 236.1 260 50.0
PGR042G1249 Punica granatum HOM05D006877 ORTHO05D008735 9.4e-60 235.7 269 46.5
CsaV3_6G010140 Cucumis sativus L. HOM05D006877 ORTHO05D008735 3.6e-59 233.8 268 48.9
Solyc03g097000.3 Solanum lycopersicum HOM05D006877 ORTHO05D008735 4.7e-59 233.4 273 48.0
Medtr8g080940 Medicago truncatula HOM05D006877 ORTHO05D008735 8.0e-59 232.6 272 48.2
Nitab4.5_0011357g0010 Nicotiana tabacum HOM05D006877 ORTHO05D008735 8.0e-59 232.6 264 50.0
TPR.G11966 Trifolium pratense HOM05D006877 ORTHO05D008735 1.0e-58 232.3 272 46.0
Thhalv10003569m.g Eutrema salsugineum HOM05D006877 ORTHO05D008735 1.8e-58 231.5 259 49.4
Psat7g076160 Pisum sativum HOM05D006877 ORTHO05D008735 4.0e-58 230.3 269 48.0
SalBow4G3121 Salvia bowleyana HOM05D006877 ORTHO05D008735 2.0e-57 228.0 270 45.2
A06p37650 Brassica napus HOM05D006877 ORTHO05D008735 2.6e-57 227.6 257 49.4
ClCG02G007690 Citrullus lanatus HOM05D006877 ORTHO05D008735 2.6e-57 227.6 276 47.5
Ca_18009_v3 Cicer arietinum L. HOM05D006877 ORTHO05D008735 4.4e-57 226.9 268 47.8
Sed0012706 Sechium edule HOM05D006877 ORTHO05D008735 4.4e-57 226.9 270 46.7
BraA06t26685Z Brassica rapa HOM05D006877 ORTHO05D008735 7.4e-57 226.1 260 48.8
SalBow4G0068 Salvia bowleyana HOM05D006877 ORTHO05D008735 1.7e-56 224.9 270 45.2
Sp2g20510 Schrenkiella parvula HOM05D006877 ORTHO05D008735 2.8e-56 224.2 256 48.4
Rhsim09G0212700 Rhododendron simsii HOM05D006877 ORTHO05D008735 3.7e-56 223.8 580 63.6
AL6G39840 Arabidopsis lyrata HOM05D006877 ORTHO05D008735 8.2e-56 222.6 270 45.6
arahy.Tifrunner.gnm1.ann1.G9QUK2 Arachis hypogaea HOM05D006877 ORTHO05D008735 4.1e-55 220.3 270 46.7
C07p40570 Brassica napus HOM05D006877 ORTHO05D008735 1.2e-54 218.8 258 47.7
arahy.Tifrunner.gnm1.ann1.VTBJ7F Arachis hypogaea HOM05D006877 ORTHO05D008735 1.6e-54 218.4 267 46.1
HanXRQChr01g0027911 Helianthus annuus HOM05D006877 ORTHO05D008735 2.0e-54 218.0 586 57.2
PSO063G6761 Papaver somniferum HOM05D006877 ORTHO05D008735 3.5e-54 217.2 270 44.8
ECA246G2862 Erigeron canadensis HOM05D006877 ORTHO05D008735 4.5e-54 216.9 589 57.0
BolC7t44594H Brassica oleracea HOM05D006877 ORTHO05D008735 1.7e-53 214.9 258 46.9
CAN.G1131.10 Capsicum annuum HOM05D006877 ORTHO05D008735 1.7e-53 214.9 250 48.8
MELO3C024733.2 Cucumis melo HOM05D006877 ORTHO05D008735 2.2e-53 214.5 268 46.3
SGA_v2.0_scaffold18G08509 Striga asiatica HOM05D006877 ORTHO05D008735 2.5e-52 211.1 271 43.9
Aqoxy3G02132 Aquilegia oxysepala HOM05D006877 ORTHO05D008735 4.2e-52 210.3 288 42.7
Lsat_1_v5_gn_3_600 Lactuca sativa HOM05D006877 ORTHO05D008735 9.4e-52 209.1 594 52.4
MD01G1235800 Malus domestica HOM05D006877 ORTHO05D008735 4.7e-51 206.8 270 43.7
Sc25g0001210 Simmondsia chinensis HOM05D006877 ORTHO05D008735 3.7e-48 197.2 268 42.2
MBI04_g20982_MAGBIO Magnolia biondii HOM05D006877 ORTHO05D008735 1.8e-47 194.9 270 42.6
EL10Ac3g05079 Beta vulgaris HOM05D006877 ORTHO05D008735 1.6e-46 191.8 270 41.9
CDE03G0296 Ceratophyllum demersum HOM05D006877 ORTHO05D008735 1.1e-44 185.7 253 43.1
Hund27367 Selenicereus undatus HOM05D006877 ORTHO05D008735 1.4e-39 168.7 273 39.6
Ah.04g156540 Amaranthus hybridus HOM05D006877 ORTHO05D008735 4.2e-36 157.1 273 38.8
Zm00001eb378980 Zea mays HOM05D006877 ORTHO05D008735 1.5e-33 148.7 272 34.6
vmacro22172 Vaccinium macrocarpon HOM05D006877 ORTHO05D008735 5.9e-30 136.7 115 56.5
HPP92_012823 Vanilla planifolia HOM05D006877 ORTHO05D008735 7.8e-30 136.3 270 32.2
SEGI_02928 Sequoiadendron giganteum HOM05D006877 ORTHO05D008735 7.3e-28 129.8 270 31.9
vmacro22171 Vaccinium macrocarpon HOM05D006877 ORTHO05D008735 2.3e-26 124.8 257 34.6
AUR62002061 Chenopodium quinoa HOM05D006877 ORTHO05D008735 4.6e-22 110.5 238 33.2
Cc01_g05460 Coffea canephora HOM05D006877 ORTHO05D008735 6.0e-22 110.2 109 50.5
BcaNung02478 Brassica carinata HOM05D000721 ORTHO05D001990 1.0e-21 109.4 138 44.2
CDE06G2178 Ceratophyllum demersum HOM05D006877 ORTHO05D008735 4.3e-20 104.0 89 57.3
AUR62028175 Chenopodium quinoa HOM05D006877 ORTHO05D008735 1.2e-19 102.4 144 44.4
ATR0829G170 Amborella trichopoda HOM05D006877 ORTHO05D008735 2.3e-18 98.2 225 32.0
TAR636G2077 Trochodendron aralioides HOM05D006877 ORTHO05D008735 2.6e-17 94.7 77 57.1
CDE03G0140 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 3.0e-13 81.3 99 42.4
Os06g0111300 Oryza sativa ssp. japonica HOM05D006877 ORTHO05D008735 6.6e-13 80.1 173 30.1
VMungo0251G3229 Vigna mungo HOM05D006877 ORTHO05D008735 1.8e-10 72.0 57 59.6
Lalb_Chr13g0294621 Lupinus albus HOM05D006877 ORTHO05D008735 8.9e-10 69.7 75 44.0
Lj7C559T20 Lonicera japonica HOM05D000001 ORTHO05D000003 4.9e-08 63.9 254 25.2
Dinv43528 Davidia involucrata HOM05D000001 ORTHO05D000003 1.4e-07 62.4 250 23.6
TAR636G0077 Trochodendron aralioides HOM05D006877 ORTHO05D008735 1.4e-07 62.4 35 80.0
Ca_13919_v3 Cicer arietinum L. HOM05D000001 ORTHO05D000003 7.1e-07 60.1 290 21.0
Sed0018355 Sechium edule HOM05D000001 ORTHO05D009502 7.1e-07 60.1 238 23.5
AagrBONN_evm.TU.Sc2ySwM_362.1641 Anthoceros agrestis HOM05D006877 ORTHO05D008735 9.2e-07 59.7 223 24.2
Peaxi162Scf00169g00086 Petunia axillaris HOM05D000001 ORTHO05D000003 1.6e-06 58.9 316 23.7
Lj6g0002214 Lotus japonicus HOM05D000001 ORTHO05D000003 2.7e-06 58.2 243 24.7
TPR.G38845 Trifolium pratense HOM05D000001 ORTHO05D000003 4.6e-06 57.4 269 20.8
Thecc.09G250500 Theobroma cacao HOM05D000001 ORTHO05D000003 7.8e-06 56.6 234 21.8


User provided reference genes

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