Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc37.188 Carica papaya HOM05D004110 ORTHO05D004810 1.4e-265 919.1 468 100.0
Cfa005187 Carpinus fangiana HOM05D004110 ORTHO05D004810 1.1e-196 690.3 474 73.8
QL11p047649 Quercus lobata HOM05D004110 ORTHO05D004810 2.2e-194 682.6 478 73.8
Thecc.02G066600 Theobroma cacao HOM05D004110 ORTHO05D004810 9.2e-193 677.2 475 72.6
RcHm_v2.0_Chr6g0245151 Rosa chinensis HOM05D004110 ORTHO05D004810 2.3e-191 672.5 478 72.6
CiPaw.06G125000 Carya illinoinensis HOM05D004110 ORTHO05D004810 6.6e-191 671.0 481 71.5
GSVIVG01024075001 Vitis vinifera HOM05D004110 ORTHO05D004810 7.3e-190 667.5 475 69.7
Dinv04965 Davidia involucrata HOM05D004110 ORTHO05D004810 9.5e-190 667.2 475 70.1
Manes.04G077900 Manihot esculenta HOM05D004110 ORTHO05D004810 2.8e-189 665.6 475 72.0
FAN24G2945 Fragaria x ananassa HOM05D004110 ORTHO05D004810 5.2e-188 661.4 475 71.6
FAN15G2714 Fragaria x ananassa HOM05D004110 ORTHO05D004810 8.9e-188 660.6 475 71.8
FvH4_2g01950 Fragaria vesca HOM05D004110 ORTHO05D004810 2.0e-187 659.4 475 71.6
vmacro17378 Vaccinium macrocarpon HOM05D004110 ORTHO05D004810 2.0e-187 659.4 475 70.1
Actinidia29167 Actinidia chinensis HOM05D004110 ORTHO05D004810 5.8e-187 657.9 475 69.5
Haze_02194 Corylus avellana HOM05D004110 ORTHO05D004810 9.9e-187 657.1 540 65.4
MD05G1116500 Malus domestica HOM05D004110 ORTHO05D004810 1.3e-186 656.8 475 70.7
FAN20G3101 Fragaria x ananassa HOM05D004110 ORTHO05D004810 1.7e-186 656.4 475 71.2
TWI79G0689 Tripterygium wilfordii HOM05D004110 ORTHO05D004810 3.7e-186 655.2 479 70.1
Ciclev10027667m.g Citrus clementina HOM05D004110 ORTHO05D004810 2.4e-185 652.5 482 71.0
THA.LOC104824773 Tarenaya hassleriana HOM05D004110 ORTHO05D004810 2.4e-185 652.5 477 70.4
Rhsim05G0062900 Rhododendron simsii HOM05D004110 ORTHO05D004810 4.1e-185 651.7 475 69.3
Prupe.8G161000 Prunus persica HOM05D004110 ORTHO05D004810 5.4e-185 651.4 475 70.1
TAR376G1212 Trochodendron aralioides HOM05D004110 ORTHO05D004810 5.4e-185 651.4 475 69.1
Potri.009G130000 Populus trichocarpa HOM05D004110 ORTHO05D004810 1.6e-184 649.8 475 70.9
CANSAT25G3021 Cannabis sativa HOM05D004110 ORTHO05D004810 2.3e-183 646.0 475 69.7
Gorai.008G034000 Gossypium raimondii HOM05D004110 ORTHO05D004810 1.2e-181 640.2 480 69.6
Thhalv10024188m.g Eutrema salsugineum HOM05D004110 ORTHO05D004810 6.8e-180 634.4 475 67.8
AL7G10630 Arabidopsis lyrata HOM05D004110 ORTHO05D004810 4.4e-179 631.7 479 67.6
Sabra09G0099400 Salix brachista HOM05D004110 ORTHO05D004810 3.8e-178 628.6 489 67.5
PGR142G1237 Punica granatum HOM05D004110 ORTHO05D004810 6.4e-178 627.9 474 67.5
AT4G38760 Arabidopsis thaliana HOM05D004110 ORTHO05D004810 1.9e-177 626.3 479 67.4
BcaNung01969 Brassica carinata HOM05D004110 ORTHO05D004810 3.9e-175 618.6 475 65.7
Sp7g37050 Schrenkiella parvula HOM05D004110 ORTHO05D004810 3.9e-175 618.6 475 67.6
Lj3g0009405 Lotus japonicus HOM05D004110 ORTHO05D004810 9.6e-174 614.0 479 66.4
MSTRG.20018 Avicennia marina HOM05D004110 ORTHO05D004810 2.1e-173 612.8 475 65.3
Lj5C184G3 Lonicera japonica HOM05D004110 ORTHO05D004810 4.8e-173 611.7 500 63.0
Carub.0007s0061 Capsella rubella HOM05D004110 ORTHO05D004810 8.1e-173 610.9 475 65.9
Cc02_g16480 Coffea canephora HOM05D004110 ORTHO05D004810 6.9e-172 607.8 477 64.8
DCAR_022780 Daucus carota HOM05D004110 ORTHO05D004810 9.0e-172 607.4 475 65.7
TPR.G17192 Trifolium pratense HOM05D004110 ORTHO05D004810 1.5e-171 606.7 478 65.9
PSO675G3689 Papaver somniferum HOM05D004110 ORTHO05D004810 2.6e-171 605.9 476 63.7
Migut.B00121 Erythranthe guttata HOM05D004110 ORTHO05D004810 7.6e-171 604.4 475 65.1
arahy.Tifrunner.gnm1.ann1.5454UR Arachis hypogaea HOM05D004110 ORTHO05D004810 9.9e-171 604.0 475 64.4
arahy.Tifrunner.gnm1.ann1.6KB8MN Arachis hypogaea HOM05D004110 ORTHO05D004810 1.3e-170 603.6 475 64.4
C07p63600 Brassica napus HOM05D004110 ORTHO05D004810 2.9e-170 602.4 475 64.8
BolC7t46773H Brassica oleracea HOM05D004110 ORTHO05D004810 2.9e-170 602.4 475 64.8
Sopen11g016530 Solanum pennellii HOM05D004110 ORTHO05D004810 2.9e-170 602.4 475 63.4
A06p48910 Brassica napus HOM05D004110 ORTHO05D004810 3.8e-170 602.1 475 64.6
Gohir.D12G033200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 4.9e-170 601.7 478 66.3
PSO541G0713 Papaver somniferum HOM05D004110 ORTHO05D004810 6.4e-170 601.3 476 63.0
Ca_19005_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 1.1e-169 600.5 475 65.3
Ca_30033_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 1.1e-169 600.5 475 65.3
BraA06t27759Z Brassica rapa HOM05D004110 ORTHO05D004810 2.4e-169 599.4 475 64.4
CsaV3_2G015750 Cucumis sativus L. HOM05D004110 ORTHO05D004810 2.4e-169 599.4 480 63.8
Sed0006799 Sechium edule HOM05D004110 ORTHO05D004810 2.4e-169 599.4 479 64.3
Phvul.011G026800 Phaseolus vulgaris HOM05D004110 ORTHO05D004810 9.3e-169 597.4 475 65.1
Glyma.12G024600 Glycine max HOM05D004110 ORTHO05D004810 4.6e-168 595.1 476 64.7
Lalb_Chr01g0001341 Lupinus albus HOM05D004110 ORTHO05D004810 6.0e-168 594.7 475 63.4
Medtr4g075330 Medicago truncatula HOM05D004110 ORTHO05D004810 6.0e-168 594.7 478 64.0
Lsat_1_v5_gn_4_74700 Lactuca sativa HOM05D004110 ORTHO05D004810 2.3e-167 592.8 482 64.1
HanXRQChr10g0299011 Helianthus annuus HOM05D004110 ORTHO05D004810 3.9e-167 592.0 476 64.5
Psat7g138160 Pisum sativum HOM05D004110 ORTHO05D004810 6.6e-167 591.3 475 64.2
Nitab4.5_0006590g0020 Nicotiana tabacum HOM05D004110 ORTHO05D004810 8.7e-167 590.9 475 62.1
Aqoxy2G01068 Aquilegia oxysepala HOM05D004110 ORTHO05D004810 9.6e-166 587.4 493 60.6
Nitab4.5_0007580g0010 Nicotiana tabacum HOM05D004110 ORTHO05D004810 7.6e-163 577.8 487 60.6
Sc18g0006650 Simmondsia chinensis HOM05D004110 ORTHO05D004810 6.4e-162 574.7 475 62.9
Aa31LG6G16440 Aethionema arabicum HOM05D004110 ORTHO05D004810 1.1e-161 573.9 490 61.4
MBI05_g07505_MAGBIO Magnolia biondii HOM05D004110 ORTHO05D004810 2.4e-161 572.8 512 57.6
ECA234G0434 Erigeron canadensis HOM05D004110 ORTHO05D004810 4.2e-161 572.0 479 62.4
EL10Ac9g21435 Beta vulgaris HOM05D004110 ORTHO05D004810 2.7e-160 569.3 509 58.5
SGA_v2.0_scaffold58G20427 Striga asiatica HOM05D004110 ORTHO05D004810 6.0e-160 568.2 476 59.9
Ah.01g022610 Amaranthus hybridus HOM05D004110 ORTHO05D004810 2.6e-155 552.7 475 59.8
AUR62013086 Chenopodium quinoa HOM05D004110 ORTHO05D004810 4.2e-153 545.4 495 57.0
ATR0810G267 Amborella trichopoda HOM05D004110 ORTHO05D004810 7.9e-144 514.6 481 54.1
Hund00042 Selenicereus undatus HOM05D004110 ORTHO05D004810 1.8e-143 513.5 478 56.9
HPP92_005008 Vanilla planifolia HOM05D004110 ORTHO05D004810 1.8e-135 486.9 477 50.9
Peaxi162Scf00684g00023 Petunia axillaris HOM05D004110 ORTHO05D004810 8.2e-133 478.0 490 54.3
Nn5g29099 Nelumbo nucifera HOM05D004110 ORTHO05D004810 5.9e-131 471.9 421 60.8
Solyc11g039880.2 Solanum lycopersicum HOM05D004110 ORTHO05D004810 1.0e-127 461.1 334 68.3
Gohir.A12G039200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 2.2e-125 453.4 296 76.7
MD10G1119400 Malus domestica HOM05D004110 ORTHO05D004810 1.2e-123 447.6 287 78.0
SHI05691 Sapria himalayana HOM05D004110 ORTHO05D004810 1.5e-123 447.2 500 51.4
Glyma.11G098551 Glycine max HOM05D004110 ORTHO05D004810 2.6e-123 446.4 337 66.2
SEGI_22139 Sequoiadendron giganteum HOM05D004110 ORTHO05D004810 2.8e-117 426.4 473 46.9
Oeu014463.1 Olea europaea HOM05D004110 ORTHO05D004810 2.0e-115 420.2 288 70.8
CAN.G603.2 Capsicum annuum HOM05D004110 ORTHO05D004810 2.7e-112 409.8 330 63.9
Pp3c5_12360 Physcomitrium patens HOM05D004110 ORTHO05D004810 9.4e-105 384.8 492 40.9
CDE05G0764 Ceratophyllum demersum HOM05D004110 ORTHO05D004810 2.3e-103 380.2 472 44.3
unitig_21.g20818 Utricularia gibba HOM05D004110 ORTHO05D004810 8.0e-96 355.1 483 42.0
Eucgr.I01378 Eucalyptus grandis HOM05D004110 ORTHO05D004810 1.8e-92 344.0 238 73.9
AagrBONN_evm.TU.Sc2ySwM_344.4164 Anthoceros agrestis HOM05D004110 ORTHO05D004810 6.6e-90 335.5 541 35.3
Mapoly0001s0208 Marchantia polymorpha HOM05D004110 ORTHO05D004810 1.9e-89 334.0 445 40.0
ClCG02G011580 Citrullus lanatus HOM05D004110 ORTHO05D004810 3.1e-79 300.1 215 69.3
CSS0003289 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 1.9e-73 280.8 187 74.3
Duzib248G1214 Durio zibethinus HOM05D004110 ORTHO05D004810 9.3e-60 235.3 171 70.2
CSS0015162 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 4.9e-37 159.8 100 77.0
Solyc11g039890.2 Solanum lycopersicum HOM05D004110 ORTHO05D004810 2.1e-32 144.4 143 49.7
MD10G1119100 Malus domestica HOM05D004110 ORTHO05D004810 1.2e-27 128.6 133 53.4
ClCG02G011590 Citrullus lanatus HOM05D004110 ORTHO05D004810 7.9e-27 125.9 119 52.9
COL.COLO4_17260 Corchorus olitorius HOM05D004110 ORTHO05D004810 9.7e-25 119.0 117 51.3
CSS0008861 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 4.5e-22 110.2 119 47.9
ClCG02G011550 Citrullus lanatus HOM05D004110 ORTHO05D004810 1.3e-21 108.6 147 42.9
MCO14G095 Micromonas commoda HOM05D004110 ORTHO05D004810 6.5e-21 106.3 500 26.0
Hma1.2p1_0032F.1_g019640 Hydrangea macrophylla HOM05D004110 ORTHO05D004810 8.8e-18 95.9 78 57.7
Gohir.A12G039250 Gossypium hirsutum HOM05D004110 ORTHO05D004810 1.7e-16 91.7 76 57.9
arahy.Tifrunner.gnm1.ann1.G8A5JV Arachis hypogaea HOM05D004110 ORTHO05D004810 1.8e-15 88.2 78 53.8
CBR_g5647 Chara braunii HOM05D004110 ORTHO05D004810 2.4e-15 87.8 159 32.7
BolC8t52466H Brassica oleracea HOM05D004110 ORTHO05D004810 5.3e-15 86.7 51 70.6
Psat1g093160 Pisum sativum HOM05D004110 ORTHO05D004810 1.5e-14 85.1 71 56.3
HanXRQChr09g0252681 Helianthus annuus HOM05D004110 ORTHO05D004810 5.0e-13 80.1 59 59.3
Zm00001eb026660 Zea mays HOM05D004110 ORTHO05D004810 1.9e-12 78.2 123 35.0
Os10g0154566 Oryza sativa ssp. japonica HOM05D004110 ORTHO05D004810 2.5e-12 77.8 122 33.6
arahy.Tifrunner.gnm1.ann1.9L03M9 Arachis hypogaea HOM05D004110 ORTHO05D004810 1.4e-10 72.0 43 74.4
AagrBONN_evm.TU.Sc2ySwM_344.4149 Anthoceros agrestis HOM05D004110 ORTHO05D004810 5.1e-10 70.1 148 30.4
VMungo0464G1786 Vigna mungo HOM05D004110 ORTHO05D004810 2.0e-09 68.2 57 54.4
CBR_g66117 Chara braunii HOM05D000019 ORTHO05D001702 3.3e-09 67.4 98 38.8
Duzib248G0615 Durio zibethinus HOM05D004110 ORTHO05D004810 4.8e-08 63.5 159 31.4
AT4G10843 Arabidopsis thaliana HOM05D004110 ORTHO05D038727 1.2e-06 58.9 95 40.0


User provided reference genes

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