Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc37.173 Carica papaya HOM05D006341 ORTHO05D000377 7.7e-222 773.5 380 100.0
Ciclev10028267m.g Citrus clementina HOM05D006341 ORTHO05D000377 6.4e-144 514.6 497 55.9
Dinv04950 Davidia involucrata HOM05D006341 ORTHO05D000377 8.4e-144 514.2 497 56.5
Duzib132G0346 Durio zibethinus HOM05D006341 ORTHO05D000377 1.2e-142 510.4 484 56.6
Thecc.02G064100 Theobroma cacao HOM05D006341 ORTHO05D000377 1.7e-141 506.5 484 56.8
COL.COLO4_17298 Corchorus olitorius HOM05D006341 ORTHO05D000377 1.5e-140 503.4 484 56.4
Gohir.D12G033900 Gossypium hirsutum HOM05D006341 ORTHO05D000377 2.1e-139 499.6 483 55.9
Gorai.008G034900 Gossypium raimondii HOM05D006341 ORTHO05D000377 2.1e-139 499.6 483 55.9
CSS0004411 Camellia sinensis var. sinensis HOM05D006341 ORTHO05D000377 3.6e-139 498.8 494 55.3
Sabra04G0114400 Salix brachista HOM05D006341 ORTHO05D000377 3.6e-139 498.8 497 55.9
Gohir.A12G038400 Gossypium hirsutum HOM05D006341 ORTHO05D000377 8.1e-139 497.7 483 55.9
Haze_02181 Corylus avellana HOM05D006341 ORTHO05D000377 1.2e-137 493.8 478 55.2
Atru.chr5.3277 Acer truncatum HOM05D006341 ORTHO05D000377 1.5e-137 493.4 468 56.0
Haze_02174 Corylus avellana HOM05D006341 ORTHO05D000377 7.6e-137 491.1 478 55.0
Rhsim11G0190600 Rhododendron simsii HOM05D006341 ORTHO05D000377 3.8e-136 488.8 497 53.9
Potri.004G172100 Populus trichocarpa HOM05D006341 ORTHO05D000377 7.1e-135 484.6 497 55.1
Manes.11G082657 Manihot esculenta HOM05D006341 ORTHO05D000377 6.0e-134 481.5 491 55.2
Atru.chr5.3271 Acer truncatum HOM05D006341 ORTHO05D000377 7.9e-134 481.1 485 54.6
TAR381G0106 Trochodendron aralioides HOM05D006341 ORTHO05D000377 7.9e-134 481.1 498 54.2
QL11p049167 Quercus lobata HOM05D006341 ORTHO05D000377 1.3e-133 480.3 481 54.5
TWI53G1223 Tripterygium wilfordii HOM05D006341 ORTHO05D000377 3.9e-133 478.8 494 53.4
COL.COLO4_17179 Corchorus olitorius HOM05D006341 ORTHO05D000377 7.4e-132 474.6 464 55.4
vmacro02264 Vaccinium macrocarpon HOM05D006341 ORTHO05D000377 2.1e-131 473.0 530 50.4
Hma1.2p1_0032F.1_g019570 Hydrangea macrophylla HOM05D006341 ORTHO05D000377 4.0e-130 468.8 498 52.0
RcHm_v2.0_Chr6g0244441 Rosa chinensis HOM05D006341 ORTHO05D000377 5.8e-129 464.9 484 53.1
CANSAT25G3024 Cannabis sativa HOM05D006341 ORTHO05D000377 7.6e-129 464.5 486 52.3
FvH4_2g01620 Fragaria vesca HOM05D006341 ORTHO05D000377 9.9e-129 464.2 486 53.1
RcHm_v2.0_Chr6g0244411 Rosa chinensis HOM05D006341 ORTHO05D000377 2.9e-128 462.6 487 52.8
Actinidia00608 Actinidia chinensis HOM05D006341 ORTHO05D000377 3.8e-128 462.2 473 54.1
Prupe.8G162700 Prunus persica HOM05D006341 ORTHO05D000377 8.4e-128 461.1 502 52.2
PGR042G0052 Punica granatum HOM05D006341 ORTHO05D000377 8.4e-128 461.1 473 55.8
MD05G1118100 Malus domestica HOM05D006341 ORTHO05D000377 1.9e-127 459.9 489 51.9
Oeu006673.1 Olea europaea HOM05D006341 ORTHO05D000377 2.7e-126 456.1 495 52.3
Hund06416 Selenicereus undatus HOM05D006341 ORTHO05D000377 7.4e-124 448.0 519 49.5
Cc06_g16120 Coffea canephora HOM05D006341 ORTHO05D000377 1.6e-123 446.8 496 49.2
THA.LOC104807791 Tarenaya hassleriana HOM05D006341 ORTHO05D000377 4.8e-123 445.3 498 51.6
Nn7g37263 Nelumbo nucifera HOM05D006341 ORTHO05D000377 6.2e-123 444.9 496 51.0
CiPaw.06G124100 Carya illinoinensis HOM05D006341 ORTHO05D000377 7.6e-121 438.0 311 70.7
Lsat_1_v5_gn_8_124961 Lactuca sativa HOM05D006341 ORTHO05D000377 1.3e-120 437.2 458 50.7
BcaB06g27766 Brassica carinata HOM05D006341 ORTHO05D000377 3.8e-120 435.6 446 54.3
ClCG02G004230 Citrullus lanatus HOM05D006341 ORTHO05D000377 1.4e-119 433.7 499 49.7
CsaV3_7G000880 Cucumis sativus L. HOM05D006341 ORTHO05D000377 7.1e-119 431.4 488 50.4
Thhalv10000146m.g Eutrema salsugineum HOM05D006341 ORTHO05D000377 1.2e-118 430.6 487 50.1
AL4G10160 Arabidopsis lyrata HOM05D006341 ORTHO05D000377 2.1e-118 429.9 476 50.6
Psat7g085760 Pisum sativum HOM05D006341 ORTHO05D000377 2.1e-118 429.9 492 48.0
Carub.0003s3491 Capsella rubella HOM05D006341 ORTHO05D000377 3.5e-118 429.1 485 50.3
HanXRQChr17g0553851 Helianthus annuus HOM05D006341 ORTHO05D000377 3.9e-117 425.6 454 50.2
AT2G21070 Arabidopsis thaliana HOM05D006341 ORTHO05D000377 5.1e-117 425.2 485 50.5
TPR.G31245 Trifolium pratense HOM05D006341 ORTHO05D000377 5.1e-117 425.2 495 47.3
Aqoxy5G01641 Aquilegia oxysepala HOM05D006341 ORTHO05D000377 1.1e-116 424.1 481 48.9
Sp4g00210 Schrenkiella parvula HOM05D006341 ORTHO05D000377 1.1e-116 424.1 497 49.1
Dinv39489 Davidia involucrata HOM05D006341 ORTHO05D000377 1.9e-116 423.3 461 52.1
Migut.B00102 Erythranthe guttata HOM05D006341 ORTHO05D000377 1.3e-115 420.6 478 50.4
EL10Ac9g21414 Beta vulgaris HOM05D006341 ORTHO05D000377 6.3e-115 418.3 510 47.5
SalBow1G4312 Salvia bowleyana HOM05D006341 ORTHO05D000377 1.1e-114 417.5 490 49.2
A04p15870 Brassica napus HOM05D006341 ORTHO05D000377 1.8e-114 416.8 447 53.2
Aa31LG7G15600 Aethionema arabicum HOM05D006341 ORTHO05D000377 2.4e-114 416.4 476 49.8
BraA04t17219Z Brassica rapa HOM05D006341 ORTHO05D000377 2.4e-114 416.4 449 52.8
AUR62010072 Chenopodium quinoa HOM05D006341 ORTHO05D000377 2.4e-114 416.4 509 47.7
C04p50300 Brassica napus HOM05D006341 ORTHO05D000377 3.1e-114 416.0 452 51.8
BolC4t26628H Brassica oleracea HOM05D006341 ORTHO05D000377 3.1e-114 416.0 452 51.8
Peaxi162Scf00434g00625 Petunia axillaris HOM05D006341 ORTHO05D000377 5.3e-114 415.2 485 49.5
Sopen01g042030 Solanum pennellii HOM05D006341 ORTHO05D000377 6.9e-114 414.8 483 48.7
CAN.G134.236 Capsicum annuum HOM05D006341 ORTHO05D000377 2.0e-113 413.3 486 49.0
arahy.Tifrunner.gnm1.ann1.MR7L4V Arachis hypogaea HOM05D006341 ORTHO05D000377 3.4e-113 412.5 487 48.5
Solyc01g098460.4 Solanum lycopersicum HOM05D006341 ORTHO05D000377 3.4e-113 412.5 483 48.4
CARHR111910 Cardamine hirsuta HOM05D006341 ORTHO05D000377 4.5e-113 412.1 476 49.8
Lj4g0012983 Lotus japonicus HOM05D006341 ORTHO05D000377 7.7e-113 411.4 492 48.2
SGA_v2.0_scaffold58G20406 Striga asiatica HOM05D006341 ORTHO05D000377 1.0e-112 411.0 467 50.1
MSTRG.16892 Avicennia marina HOM05D006341 ORTHO05D000377 1.7e-112 410.2 497 49.1
arahy.Tifrunner.gnm1.ann1.UN7M5W Arachis hypogaea HOM05D006341 ORTHO05D000377 2.9e-112 409.5 486 48.4
GSVIVG01024058001 Vitis vinifera HOM05D006341 ORTHO05D000377 7.2e-111 404.8 457 50.5
FAN20G2467 Fragaria x ananassa HOM05D006341 ORTHO05D000377 9.4e-111 404.4 445 51.0
Sc08g0003080 Simmondsia chinensis HOM05D006341 ORTHO05D000377 1.6e-110 403.7 527 45.4
Eucgr.G01768 Eucalyptus grandis HOM05D006341 ORTHO05D000377 4.6e-110 402.1 493 48.3
FAN24G0408 Fragaria x ananassa HOM05D006341 ORTHO05D000377 7.9e-110 401.4 445 50.8
Lj5A183G92 Lonicera japonica HOM05D006341 ORTHO05D000377 3.9e-109 399.1 464 48.5
MBI02_g27965_MAGBIO Magnolia biondii HOM05D006341 ORTHO05D000377 6.7e-109 398.3 487 48.7
ECA233G1460 Erigeron canadensis HOM05D006341 ORTHO05D000377 1.1e-108 397.5 459 48.6
Ca_18243_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 1.3e-107 394.0 478 47.5
Glyma.08G087700 Glycine max HOM05D006341 ORTHO05D000377 2.8e-107 392.9 487 47.2
Nitab4.5_0001423g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 1.2e-105 387.5 482 47.3
Sed0009186 Sechium edule HOM05D006341 ORTHO05D000377 1.4e-103 380.6 450 48.9
QL11p048584 Quercus lobata HOM05D006341 ORTHO05D000377 3.2e-103 379.4 319 62.4
CDE05G1540 Ceratophyllum demersum HOM05D006341 ORTHO05D000377 5.5e-103 378.6 505 44.0
Lalb_Chr13g0293551 Lupinus albus HOM05D006341 ORTHO05D000377 9.4e-103 377.9 522 43.9
Glyma.05G133200 Glycine max HOM05D006341 ORTHO05D000377 2.7e-102 376.3 490 45.7
SHI05717 Sapria himalayana HOM05D006341 ORTHO05D000377 4.7e-102 375.6 474 46.8
MELO3C013369.2 Cucumis melo HOM05D006341 ORTHO05D000377 6.1e-102 375.2 448 48.7
unitig_60.g25823 Utricularia gibba HOM05D006341 ORTHO05D000377 7.4e-100 368.2 472 46.2
Os02g0121200 Oryza sativa ssp. japonica HOM05D006341 ORTHO05D000377 4.8e-99 365.5 472 46.2
Nitab4.5_0001903g0070 Nicotiana tabacum HOM05D006341 ORTHO05D000377 4.5e-97 359.0 419 48.9
ATR0810G159 Amborella trichopoda HOM05D006341 ORTHO05D000377 5.9e-97 358.6 511 42.7
VMungo0251G3227 Vigna mungo HOM05D006341 ORTHO05D000377 7.2e-95 351.7 448 47.1
HPP92_014019 Vanilla planifolia HOM05D006341 ORTHO05D000377 2.1e-94 350.1 483 43.1
Ah.01g008830 Amaranthus hybridus HOM05D006341 ORTHO05D000377 1.1e-92 344.4 487 43.9
Phvul.002G189600 Phaseolus vulgaris HOM05D006341 ORTHO05D000377 1.9e-87 327.0 446 46.0
Carub.0004s0010 Capsella rubella HOM05D006341 ORTHO05D000377 4.7e-86 322.4 430 45.8
SEGI_13829 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 5.5e-79 298.9 515 38.6
SEGI_22420 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 5.5e-79 298.9 515 38.6
AagrBONN_evm.TU.Sc2ySwM_228.2682 Anthoceros agrestis HOM05D006341 ORTHO05D000377 2.7e-78 296.6 458 40.2
Zm00001eb208320 Zea mays HOM05D006341 ORTHO05D000377 1.3e-75 287.7 265 55.8
Nitab4.5_0008354g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 1.7e-75 287.3 231 62.8
Mapoly0085s0033 Marchantia polymorpha HOM05D006341 ORTHO05D000377 1.7e-67 260.8 566 32.5
Potri.009G131700 Populus trichocarpa HOM05D006341 ORTHO05D000377 6.3e-67 258.8 314 48.1
Ca_18241_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 2.5e-63 246.9 426 39.2
Pp3c8_21040 Physcomitrium patens HOM05D006341 ORTHO05D000377 3.3e-63 246.5 546 30.6
Sabra09G0102100 Salix brachista HOM05D006341 ORTHO05D000377 4.0e-61 239.6 423 38.5
SMO169G0079 Selaginella moellendorffii HOM05D006341 ORTHO05D000377 3.2e-58 229.9 425 35.8
Atru.chr5.3221 Acer truncatum HOM05D006341 ORTHO05D000377 2.4e-50 203.8 149 65.8
PGSC0003DMG402028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 4.3e-39 166.4 118 68.6
CBR_g23939 Chara braunii HOM05D006341 ORTHO05D000377 2.4e-37 160.6 217 42.4
FAN22G0308 Fragaria x ananassa HOM05D003409 ORTHO05D004015 2.0e-36 157.5 172 48.8
FAN07G1625 Fragaria x ananassa HOM05D006341 ORTHO05D000377 2.6e-36 157.1 95 75.8
Cre01.g044150 Chlamydomonas reinhardtii HOM05D006341 ORTHO05D000377 9.0e-29 132.1 139 48.2
MCO01G168 Micromonas commoda HOM05D006341 ORTHO05D000377 4.9e-27 126.3 109 51.4
Actinidia20497 Actinidia chinensis HOM05D006341 ORTHO05D000377 5.4e-26 122.9 78 76.9
PGSC0003DMG401028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 3.3e-23 113.6 73 74.0
FAN07G2354 Fragaria x ananassa HOM05D006341 ORTHO05D000377 4.3e-23 113.2 132 52.3
PRCOL_00006207 Prasinoderma coloniale HOM05D006341 ORTHO05D000377 8.4e-19 99.0 102 48.0
Atru.chr5.3222 Acer truncatum HOM05D006341 ORTHO05D000377 7.6e-12 75.9 60 58.3
MD10G1121100 Malus domestica HOM05D006341 ORTHO05D000377 6.2e-06 56.2 42 61.9


User provided reference genes

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