Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc34.89 Carica papaya HOM05D004263 ORTHO05D004931 7.8e-97 357.1 174 100.0
COL.COLO4_13682 Corchorus olitorius HOM05D004263 ORTHO05D004931 1.4e-74 283.1 153 87.6
Gohir.D01G015400 Gossypium hirsutum HOM05D004263 ORTHO05D004931 1.2e-73 280.0 153 85.0
Gorai.002G017100 Gossypium raimondii HOM05D004263 ORTHO05D004931 1.2e-73 280.0 153 85.0
Duzib248G0991 Durio zibethinus HOM05D004263 ORTHO05D004931 6.0e-73 277.7 153 84.3
Thecc.02G171500 Theobroma cacao HOM05D004263 ORTHO05D004931 6.0e-73 277.7 153 85.0
CANSAT64G2398 Cannabis sativa HOM05D004263 ORTHO05D004931 7.9e-73 277.3 153 84.3
Gohir.A01G015400 Gossypium hirsutum HOM05D004263 ORTHO05D004931 7.9e-73 277.3 153 84.3
GSVIVG01030005001 Vitis vinifera HOM05D004263 ORTHO05D004931 3.0e-72 275.4 153 85.6
Manes.12G082900 Manihot esculenta HOM05D004263 ORTHO05D004931 5.1e-72 274.6 153 84.3
PGR142G2990 Punica granatum HOM05D004263 ORTHO05D004931 1.1e-71 273.5 153 84.3
Haze_03591 Corylus avellana HOM05D004263 ORTHO05D004931 1.5e-71 273.1 153 83.7
Prupe.3G231000 Prunus persica HOM05D004263 ORTHO05D004931 1.5e-71 273.1 153 82.4
TWI75G0058 Tripterygium wilfordii HOM05D004263 ORTHO05D004931 1.9e-71 272.7 153 84.3
arahy.Tifrunner.gnm1.ann1.0PC56D Arachis hypogaea HOM05D004263 ORTHO05D004931 4.3e-71 271.6 153 83.0
arahy.Tifrunner.gnm1.ann1.RA2UAB Arachis hypogaea HOM05D004263 ORTHO05D004931 4.3e-71 271.6 153 83.0
Haze_13086 Corylus avellana HOM05D004263 ORTHO05D004931 4.3e-71 271.6 153 83.0
RcHm_v2.0_Chr2g0161771 Rosa chinensis HOM05D004263 ORTHO05D004931 4.3e-71 271.6 153 83.0
Sabra13G0119200 Salix brachista HOM05D004263 ORTHO05D004931 5.7e-71 271.2 153 81.0
Potri.013G147600 Populus trichocarpa HOM05D004263 ORTHO05D004931 7.4e-71 270.8 153 80.4
CiPaw.03G169700 Carya illinoinensis HOM05D004263 ORTHO05D004931 9.7e-71 270.4 153 83.0
MELO3C018764.2 Cucumis melo HOM05D004263 ORTHO05D004931 9.7e-71 270.4 153 80.4
TAR627G0082 Trochodendron aralioides HOM05D004263 ORTHO05D004931 9.7e-71 270.4 153 81.7
CSS0002238 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 1.6e-70 269.6 153 81.0
CSS0005038 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 1.6e-70 269.6 153 81.0
Cfa014543 Carpinus fangiana HOM05D004263 ORTHO05D004931 1.6e-70 269.6 153 83.0
MD17G1084700 Malus domestica HOM05D004263 ORTHO05D004931 1.6e-70 269.6 153 81.0
Cfa010655 Carpinus fangiana HOM05D004263 ORTHO05D004931 2.2e-70 269.2 153 82.4
CsaV3_7G004120 Cucumis sativus L. HOM05D004263 ORTHO05D004931 2.2e-70 269.2 153 79.7
FvH4_6g44560 Fragaria vesca HOM05D004263 ORTHO05D004931 3.7e-70 268.5 153 81.7
FAN02G3638 Fragaria x ananassa HOM05D004263 ORTHO05D004931 3.7e-70 268.5 153 81.7
FAN14G1228 Fragaria x ananassa HOM05D004263 ORTHO05D004931 3.7e-70 268.5 153 81.7
Sed0028127 Sechium edule HOM05D004263 ORTHO05D004931 3.7e-70 268.5 153 78.4
Actinidia39296 Actinidia chinensis HOM05D004263 ORTHO05D004931 6.3e-70 267.7 153 80.4
CSS0035503 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 6.3e-70 267.7 153 81.0
Eucgr.K00914 Eucalyptus grandis HOM05D004263 ORTHO05D004931 6.3e-70 267.7 153 81.7
Nitab4.5_0001514g0010 Nicotiana tabacum HOM05D004263 ORTHO05D004931 6.3e-70 267.7 153 81.0
CSS0035062 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 8.2e-70 267.3 153 80.4
Glyma.13G301100 Glycine max HOM05D004263 ORTHO05D004931 8.2e-70 267.3 153 80.4
Lj1C736T2 Lonicera japonica HOM05D004263 ORTHO05D004931 8.2e-70 267.3 153 81.0
Lj3g0003932 Lotus japonicus HOM05D004263 ORTHO05D004931 8.2e-70 267.3 153 81.0
Ah.11g047230 Amaranthus hybridus HOM05D004263 ORTHO05D004931 1.1e-69 266.9 153 79.1
MSTRG.11471 Avicennia marina HOM05D004263 ORTHO05D004931 1.1e-69 266.9 153 79.1
ClCG02G001300 Citrullus lanatus HOM05D004263 ORTHO05D004931 1.1e-69 266.9 154 80.5
QL08p037295 Quercus lobata HOM05D004263 ORTHO05D004931 1.1e-69 266.9 154 83.1
Solyc06g005080.4 Solanum lycopersicum HOM05D004263 ORTHO05D004931 1.4e-69 266.5 153 80.4
Sopen06g001070 Solanum pennellii HOM05D004263 ORTHO05D004931 1.4e-69 266.5 153 80.4
VMungo1080G0385 Vigna mungo HOM05D004263 ORTHO05D004931 1.8e-69 266.2 153 79.1
Glyma.12G201100 Glycine max HOM05D004263 ORTHO05D004931 2.4e-69 265.8 153 79.1
Nitab4.5_0000025g0490 Nicotiana tabacum HOM05D004263 ORTHO05D004931 2.4e-69 265.8 153 81.0
Peaxi162Scf00255g01022 Petunia axillaris HOM05D004263 ORTHO05D004931 2.4e-69 265.8 147 82.3
Psat2g144400 Pisum sativum HOM05D004263 ORTHO05D004931 2.4e-69 265.8 153 80.4
MD14G1065300 Malus domestica HOM05D004263 ORTHO05D004931 3.1e-69 265.4 153 81.0
Aa31LG1G2150 Aethionema arabicum HOM05D004263 ORTHO05D004931 4.1e-69 265.0 153 81.7
EL10As1g23122 Beta vulgaris HOM05D004263 ORTHO05D004931 4.1e-69 265.0 153 78.4
Thhalv10006686m.g Eutrema salsugineum HOM05D004263 ORTHO05D004931 4.1e-69 265.0 153 81.7
QL08p037237 Quercus lobata HOM05D004263 ORTHO05D004931 4.1e-69 265.0 154 82.5
vmacro09293 Vaccinium macrocarpon HOM05D004263 ORTHO05D004931 4.1e-69 265.0 157 79.0
BcaC05g25136 Brassica carinata HOM05D004263 ORTHO05D004931 5.3e-69 264.6 153 81.0
A06p09160 Brassica napus HOM05D004263 ORTHO05D004931 5.3e-69 264.6 153 81.0
BraA06t24102Z Brassica rapa HOM05D004263 ORTHO05D004931 5.3e-69 264.6 153 81.0
CARHR012770 Cardamine hirsuta HOM05D004263 ORTHO05D004931 5.3e-69 264.6 153 81.7
Ciclev10014147m.g Citrus clementina HOM05D004263 ORTHO05D004931 5.3e-69 264.6 153 81.0
THA.LOC104809434 Tarenaya hassleriana HOM05D004263 ORTHO05D004931 5.3e-69 264.6 147 83.0
CSS0039065 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 6.9e-69 264.2 155 79.4
AUR62034472 Chenopodium quinoa HOM05D004263 ORTHO05D004931 6.9e-69 264.2 153 78.4
Lj8C117G6 Lonicera japonica HOM05D004263 ORTHO05D004931 6.9e-69 264.2 153 80.4
SGA_v2.0_scaffold90G27889 Striga asiatica HOM05D004263 ORTHO05D004931 9.0e-69 263.8 147 82.3
TPR.G26159 Trifolium pratense HOM05D004263 ORTHO05D004931 9.0e-69 263.8 153 79.7
AT1G12470 Arabidopsis thaliana HOM05D004263 ORTHO05D004931 2.0e-68 262.7 153 80.4
Sp1g11070 Schrenkiella parvula HOM05D004263 ORTHO05D004931 2.0e-68 262.7 153 80.4
Migut.O00120 Erythranthe guttata HOM05D004263 ORTHO05D004931 2.6e-68 262.3 153 77.8
Hma1.2p1_0565F.1_g179560 Hydrangea macrophylla HOM05D004263 ORTHO05D004931 2.6e-68 262.3 147 83.0
BcaC05g25186 Brassica carinata HOM05D004263 ORTHO05D004931 3.4e-68 261.9 153 79.7
C05p10740 Brassica napus HOM05D004263 ORTHO05D004931 3.4e-68 261.9 153 79.7
DCAR_009724 Daucus carota HOM05D004263 ORTHO05D004931 3.4e-68 261.9 155 80.0
Oeu001693.1 Olea europaea HOM05D004263 ORTHO05D004931 3.4e-68 261.9 150 82.7
Medtr8g063380 Medicago truncatula HOM05D004263 ORTHO05D004931 4.5e-68 261.5 153 79.1
BolC5t29815H Brassica oleracea HOM05D004263 ORTHO05D004931 5.9e-68 261.2 153 79.7
Sc08g0004410 Simmondsia chinensis HOM05D004263 ORTHO05D004931 5.9e-68 261.2 153 77.8
SalBow7G3995 Salvia bowleyana HOM05D004263 ORTHO05D004931 7.6e-68 260.8 147 80.3
Carub.0001s1218 Capsella rubella HOM05D004263 ORTHO05D004931 1.0e-67 260.4 153 80.4
Ca_01536_v3 Cicer arietinum L. HOM05D004263 ORTHO05D004931 1.7e-67 259.6 153 79.1
CAN.G2148.1 Capsicum annuum HOM05D004263 ORTHO05D004931 2.2e-67 259.2 153 77.8
Cc04_g12270 Coffea canephora HOM05D004263 ORTHO05D004931 2.9e-67 258.8 162 75.9
FAN09G1275 Fragaria x ananassa HOM05D004263 ORTHO05D004931 3.8e-67 258.5 153 78.4
BcaB03g13185 Brassica carinata HOM05D004263 ORTHO05D004931 5.0e-67 258.1 153 78.4
C08p15450 Brassica napus HOM05D004263 ORTHO05D004931 5.0e-67 258.1 153 78.4
BolC8t49173H Brassica oleracea HOM05D004263 ORTHO05D004931 5.0e-67 258.1 153 78.4
Phvul.005G107700 Phaseolus vulgaris HOM05D004263 ORTHO05D004931 8.5e-67 257.3 153 76.5
unitig_0.g1433 Utricularia gibba HOM05D004263 ORTHO05D004931 1.9e-66 256.1 156 75.0
A08p32810 Brassica napus HOM05D004263 ORTHO05D004931 2.5e-66 255.8 155 78.7
BraA08t35204Z Brassica rapa HOM05D004263 ORTHO05D004931 2.5e-66 255.8 155 78.7
HanXRQChr07g0200651 Helianthus annuus HOM05D004263 ORTHO05D004931 4.2e-66 255.0 147 82.3
AL1G23830 Arabidopsis lyrata HOM05D004263 ORTHO05D004931 5.5e-66 254.6 153 77.8
PSO801G0468 Papaver somniferum HOM05D004263 ORTHO05D004931 1.2e-65 253.4 154 76.6
Lsat_1_v5_gn_3_39980 Lactuca sativa HOM05D004263 ORTHO05D004931 6.1e-65 251.1 143 81.8
PSO339G5244 Papaver somniferum HOM05D004263 ORTHO05D004931 1.3e-64 250.0 154 75.3
Aqoxy1G01192 Aquilegia oxysepala HOM05D004263 ORTHO05D004931 1.8e-64 249.6 147 76.2
ECA246G4434 Erigeron canadensis HOM05D004263 ORTHO05D004931 2.3e-64 249.2 153 75.8
SHI10474 Sapria himalayana HOM05D004263 ORTHO05D004931 1.9e-63 246.1 153 73.9
HPP92_004167 Vanilla planifolia HOM05D004263 ORTHO05D004931 3.3e-63 245.4 156 71.8
Dinv23715 Davidia involucrata HOM05D004263 ORTHO05D004931 8.5e-59 230.7 127 85.8
PGSC0003DMG400025399 Solanum tuberosum HOM05D004263 ORTHO05D004931 4.2e-58 228.4 127 81.9
Os08g0178100 Oryza sativa ssp. japonica HOM05D004263 ORTHO05D004931 6.1e-57 224.6 165 61.8
Oeu001692.1 Olea europaea HOM05D004263 ORTHO05D004931 1.8e-56 223.0 124 84.7
Medtr8g471030 Medicago truncatula HOM05D004263 ORTHO05D004931 9.7e-55 217.2 127 77.2
CDE05G0585 Ceratophyllum demersum HOM05D004263 ORTHO05D004931 2.2e-54 216.1 137 74.5
CAN.G224.18 Capsicum annuum HOM05D004263 ORTHO05D004931 4.8e-54 214.9 153 68.0
AUR62041769 Chenopodium quinoa HOM05D004263 ORTHO05D004931 7.7e-52 207.6 153 64.7
Mapoly0011s0120 Marchantia polymorpha HOM05D004263 ORTHO05D004931 7.2e-50 201.1 148 57.4
AagrBONN_evm.TU.Sc2ySwM_228.3812 Anthoceros agrestis HOM05D004263 ORTHO05D004931 2.7e-49 199.1 148 58.1
Atru.chr6.3077 Acer truncatum HOM05D004263 ORTHO05D004931 3.1e-45 185.7 153 60.8
Pp3c14_1240 Physcomitrium patens HOM05D004263 ORTHO05D004931 1.2e-44 183.7 148 57.4
SMO239G0082 Selaginella moellendorffii HOM05D004263 ORTHO05D004931 1.9e-42 176.4 147 51.7
Lalb_Chr22g0356351 Lupinus albus HOM05D004263 ORTHO05D004931 3.0e-40 169.1 99 77.8
Nn2g15850 Nelumbo nucifera HOM05D004263 ORTHO05D004931 7.5e-39 164.5 99 75.8
ATR0737G173 Amborella trichopoda HOM05D004263 ORTHO05D004931 4.0e-32 142.1 109 59.6
CBR_g40703 Chara braunii HOM05D004263 ORTHO05D004931 2.4e-21 106.3 94 48.9
Cfa022578 Carpinus fangiana HOM05D004263 ORTHO05D004931 1.7e-14 83.6 138 32.6
arahy.Tifrunner.gnm1.ann1.J1BTWL Arachis hypogaea HOM05D004263 ORTHO05D004931 2.4e-13 79.7 99 47.5
Cre07.g328550 Chlamydomonas reinhardtii HOM05D004263 ORTHO05D004931 7.8e-12 74.7 199 23.6
SEGI_32704 Sequoiadendron giganteum HOM05D004263 ORTHO05D004931 7.8e-12 74.7 47 61.7
PRCOL_00001544 Prasinoderma coloniale HOM05D004263 ORTHO05D004931 1.3e-11 73.9 175 28.6


User provided reference genes

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