Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc34.112 Carica papaya HOM05D004586 ORTHO05D005266 0.0e+00 1353.6 769 100.0
Thecc.02G173500 Theobroma cacao HOM05D004586 ORTHO05D005266 4.1e-129 466.5 816 45.6
Duzib052G0504 Durio zibethinus HOM05D004586 ORTHO05D005266 1.3e-127 461.5 747 47.9
Atru.chr6.3049 Acer truncatum HOM05D004586 ORTHO05D005266 1.9e-123 447.6 836 45.0
Ciclev10014470m.g Citrus clementina HOM05D004586 ORTHO05D005266 2.7e-117 427.2 822 45.0
COL.COLO4_13701 Corchorus olitorius HOM05D004586 ORTHO05D005266 6.7e-116 422.5 764 44.0
Haze_13103 Corylus avellana HOM05D004586 ORTHO05D005266 2.9e-111 407.1 810 45.1
Duzib106G1111 Durio zibethinus HOM05D004586 ORTHO05D005266 2.0e-104 384.4 465 51.8
Cfa014556 Carpinus fangiana HOM05D004586 ORTHO05D005266 4.2e-102 376.7 798 46.0
TWI36G0730 Tripterygium wilfordii HOM05D004586 ORTHO05D005266 7.2e-102 375.9 746 40.9
Prupe.3G233000 Prunus persica HOM05D004586 ORTHO05D005266 1.2e-101 375.2 850 41.2
Eucgr.B03848 Eucalyptus grandis HOM05D004586 ORTHO05D005266 2.1e-101 374.4 767 42.6
Gohir.D13G149100 Gossypium hirsutum HOM05D004586 ORTHO05D005266 6.1e-101 372.9 527 49.0
Gorai.013G166800 Gossypium raimondii HOM05D004586 ORTHO05D005266 2.0e-99 367.9 527 48.6
QL10p048480 Quercus lobata HOM05D004586 ORTHO05D005266 1.8e-97 361.3 813 41.7
Gohir.A13G144300 Gossypium hirsutum HOM05D004586 ORTHO05D005266 7.0e-97 359.4 528 48.1
Manes.12G079600 Manihot esculenta HOM05D004586 ORTHO05D005266 1.2e-96 358.6 530 47.2
Sabra13G0117000 Salix brachista HOM05D004586 ORTHO05D005266 3.5e-96 357.1 826 40.8
CiPaw.03G171000 Carya illinoinensis HOM05D004586 ORTHO05D005266 8.5e-95 352.4 823 41.9
Hma1.2p1_0875F.1_g231553 Hydrangea macrophylla HOM05D004586 ORTHO05D005266 1.1e-94 352.1 482 47.9
Hma1.2p1_0875F.1_g231580 Hydrangea macrophylla HOM05D004586 ORTHO05D005266 1.1e-94 352.1 482 47.9
Potri.013G145300 Populus trichocarpa HOM05D004586 ORTHO05D005266 5.5e-94 349.7 830 42.0
MD09G1092000 Malus domestica HOM05D004586 ORTHO05D005266 9.4e-94 349.0 747 40.6
Actinidia09891 Actinidia chinensis HOM05D004586 ORTHO05D005266 1.2e-93 348.6 424 51.2
CANSAT64G2104 Cannabis sativa HOM05D004586 ORTHO05D005266 1.4e-92 345.1 719 40.8
GSVIVG01030569001 Vitis vinifera HOM05D004586 ORTHO05D005266 1.4e-92 345.1 485 46.4
Actinidia12449 Actinidia chinensis HOM05D004586 ORTHO05D005266 1.8e-92 344.7 466 52.4
RcHm_v2.0_Chr2g0162091 Rosa chinensis HOM05D004586 ORTHO05D005266 2.3e-92 344.4 750 41.9
TWI18G0514 Tripterygium wilfordii HOM05D004586 ORTHO05D005266 6.8e-92 342.8 791 39.7
CSS0039758 Camellia sinensis var. sinensis HOM05D004586 ORTHO05D005266 8.3e-90 335.9 421 52.3
MD17G1081900 Malus domestica HOM05D004586 ORTHO05D005266 4.1e-89 333.6 653 43.2
THA.LOC104826023 Tarenaya hassleriana HOM05D004586 ORTHO05D005266 4.1e-89 333.6 753 42.4
FAN09G2343 Fragaria x ananassa HOM05D004586 ORTHO05D005266 9.1e-89 332.4 756 40.7
TAR627G0949 Trochodendron aralioides HOM05D004586 ORTHO05D005266 1.2e-88 332.0 456 46.3
COL.COLO4_08510 Corchorus olitorius HOM05D004586 ORTHO05D005266 1.7e-87 328.2 403 53.1
FAN02G1766 Fragaria x ananassa HOM05D004586 ORTHO05D005266 4.2e-86 323.6 754 40.1
Nitab4.5_0009520g0030 Nicotiana tabacum HOM05D004586 ORTHO05D005266 2.1e-85 321.2 393 51.1
FAN05G3704 Fragaria x ananassa HOM05D004586 ORTHO05D005266 6.1e-85 319.7 754 40.3
FvH4_6g44910 Fragaria vesca HOM05D004586 ORTHO05D005266 8.0e-85 319.3 751 40.2
Nitab4.5_0003018g0070 Nicotiana tabacum HOM05D004586 ORTHO05D005266 3.4e-83 313.9 410 50.2
PGSC0003DMG400018364 Solanum tuberosum HOM05D004586 ORTHO05D005266 1.3e-82 312.0 406 48.8
FAN14G4866 Fragaria x ananassa HOM05D004586 ORTHO05D005266 2.2e-82 311.2 744 40.6
Potri.019G104400 Populus trichocarpa HOM05D004586 ORTHO05D005266 2.2e-82 311.2 820 38.9
VMungo1127G2109 Vigna mungo HOM05D004586 ORTHO05D005266 2.8e-82 310.8 425 46.4
Phvul.011G112400 Phaseolus vulgaris HOM05D004586 ORTHO05D005266 4.9e-82 310.1 424 46.5
Sopen07g028400 Solanum pennellii HOM05D004586 ORTHO05D005266 8.3e-82 309.3 405 49.4
Lj3g0023901 Lotus japonicus HOM05D004586 ORTHO05D005266 7.0e-81 306.2 338 53.0
Rhsim06G0149700 Rhododendron simsii HOM05D004586 ORTHO05D005266 1.6e-80 305.1 444 45.0
Oeu025511.1 Olea europaea HOM05D004586 ORTHO05D005266 2.0e-80 304.7 417 48.0
vmacro12267 Vaccinium macrocarpon HOM05D004586 ORTHO05D005266 2.7e-80 304.3 508 42.1
Solyc07g054460.4 Solanum lycopersicum HOM05D004586 ORTHO05D005266 7.8e-80 302.8 405 48.6
Peaxi162Scf00007g02845 Petunia axillaris HOM05D004586 ORTHO05D005266 1.0e-79 302.4 390 48.2
PGR042G3101 Punica granatum HOM05D004586 ORTHO05D005266 2.8e-77 294.3 500 43.4
Lj1C734T7 Lonicera japonica HOM05D004586 ORTHO05D005266 8.0e-77 292.7 311 55.6
SalBow1G4799 Salvia bowleyana HOM05D004586 ORTHO05D005266 4.0e-76 290.4 667 38.2
arahy.Tifrunner.gnm1.ann1.FC6AAX Arachis hypogaea HOM05D004586 ORTHO05D005266 5.2e-76 290.0 443 45.4
SalBow7G1236 Salvia bowleyana HOM05D004586 ORTHO05D005266 8.9e-76 289.3 684 38.3
ECA234G1777 Erigeron canadensis HOM05D004586 ORTHO05D005266 1.5e-75 288.5 208 68.8
MSTRG.14187 Avicennia marina HOM05D004586 ORTHO05D005266 9.8e-75 285.8 444 45.9
Lalb_Chr01g0005391 Lupinus albus HOM05D004586 ORTHO05D005266 9.8e-75 285.8 411 47.0
TPR.G21660 Trifolium pratense HOM05D004586 ORTHO05D005266 1.7e-74 285.0 419 44.9
CAN.G78.83 Capsicum annuum HOM05D004586 ORTHO05D005266 2.2e-74 284.6 441 44.7
TAR629G0893 Trochodendron aralioides HOM05D004586 ORTHO05D005266 6.4e-74 283.1 454 43.2
Ca_20687_v3 Cicer arietinum L. HOM05D004586 ORTHO05D005266 8.3e-74 282.7 397 46.1
Medtr0072s0050 Medicago truncatula HOM05D004586 ORTHO05D005266 8.3e-74 282.7 408 45.8
SGA_v2.0_scaffold49G18309 Striga asiatica HOM05D004586 ORTHO05D005266 4.1e-73 280.4 371 45.3
Lsat_1_v5_gn_4_68860 Lactuca sativa HOM05D004586 ORTHO05D005266 5.4e-73 280.0 420 46.4
Sp1g02460 Schrenkiella parvula HOM05D004586 ORTHO05D005266 5.4e-73 280.0 452 46.9
Carub.0001s0267 Capsella rubella HOM05D004586 ORTHO05D005266 7.0e-73 279.6 467 46.0
SGA_v2.0_scaffold159G37633 Striga asiatica HOM05D004586 ORTHO05D005266 9.2e-73 279.3 327 50.5
MBI02_g10548_MAGBIO Magnolia biondii HOM05D004586 ORTHO05D005266 1.6e-72 278.5 525 44.0
HanXRQChr05g0140481 Helianthus annuus HOM05D004586 ORTHO05D005266 2.7e-72 277.7 500 44.8
HanXRQChr14g0441421 Helianthus annuus HOM05D004586 ORTHO05D005266 7.8e-72 276.2 449 43.4
MELO3C021880.2 Cucumis melo HOM05D004586 ORTHO05D005266 1.0e-71 275.8 442 45.0
CAN.G996.7 Capsicum annuum HOM05D004586 ORTHO05D005266 1.3e-71 275.4 434 45.4
AL1G13040 Arabidopsis lyrata HOM05D004586 ORTHO05D005266 1.7e-71 275.0 282 61.3
PSO541G0834 Papaver somniferum HOM05D004586 ORTHO05D005266 1.7e-71 275.0 280 56.1
AT1G03530 Arabidopsis thaliana HOM05D004586 ORTHO05D005266 3.9e-71 273.9 689 41.4
arahy.Tifrunner.gnm1.ann1.SANC69 Arachis hypogaea HOM05D004586 ORTHO05D005266 5.0e-71 273.5 328 50.3
Glyma.06G297000 Glycine max HOM05D004586 ORTHO05D005266 5.0e-71 273.5 440 44.8
PSO675G0516 Papaver somniferum HOM05D004586 ORTHO05D005266 6.6e-71 273.1 280 56.1
PSO384G2677 Papaver somniferum HOM05D004586 ORTHO05D005266 2.5e-70 271.2 441 41.5
Peaxi162Scf00485g00032 Petunia axillaris HOM05D004586 ORTHO05D005266 4.3e-70 270.4 415 46.0
Psat0s4261g0040 Pisum sativum HOM05D004586 ORTHO05D005266 4.3e-70 270.4 391 45.3
CsaV3_2G036510 Cucumis sativus L. HOM05D004586 ORTHO05D005266 2.1e-69 268.1 536 41.0
AUR62035735 Chenopodium quinoa HOM05D004586 ORTHO05D005266 4.7e-69 266.9 841 34.5
ClCG02G017410 Citrullus lanatus HOM05D004586 ORTHO05D005266 4.7e-69 266.9 409 47.7
Glyma.12G108100 Glycine max HOM05D004586 ORTHO05D005266 4.7e-69 266.9 455 41.8
Sed0007770 Sechium edule HOM05D004586 ORTHO05D005266 4.7e-69 266.9 535 40.4
Thhalv10006867m.g Eutrema salsugineum HOM05D004586 ORTHO05D005266 8.0e-69 266.2 574 45.1
Sc12g0002770 Simmondsia chinensis HOM05D004586 ORTHO05D005266 8.0e-69 266.2 300 54.7
Cc00_g21120 Coffea canephora HOM05D004586 ORTHO05D005266 6.8e-68 263.1 436 42.0
BcaB02g06919 Brassica carinata HOM05D004586 ORTHO05D005266 1.5e-67 261.9 296 58.1
MELO3C003861.2 Cucumis melo HOM05D004586 ORTHO05D005266 2.6e-67 261.2 814 35.5
Migut.H01030 Erythranthe guttata HOM05D004586 ORTHO05D005266 2.6e-67 261.2 183 70.5
unitig_26.g9937 Utricularia gibba HOM05D004586 ORTHO05D005266 3.4e-67 260.8 333 48.0
C05p01990 Brassica napus HOM05D004586 ORTHO05D005266 7.5e-67 259.6 478 40.2
DCAR_019194 Daucus carota HOM05D004586 ORTHO05D005266 2.9e-66 257.7 352 47.2
Hund09647 Selenicereus undatus HOM05D004586 ORTHO05D005266 3.7e-66 257.3 433 44.1
BraA10t42477Z Brassica rapa HOM05D000330 ORTHO05D000209 2.4e-65 254.6 382 44.0
A10p02080 Brassica napus HOM05D000330 ORTHO05D005266 5.4e-65 253.4 387 44.7
CARHR002890 Cardamine hirsuta HOM05D004586 ORTHO05D005266 1.6e-64 251.9 578 41.2
ATR0693G407 Amborella trichopoda HOM05D004586 ORTHO05D005266 1.3e-63 248.8 321 49.2
BcaC05g24523 Brassica carinata HOM05D004586 ORTHO05D005266 1.3e-63 248.8 477 40.5
BolC5t28977H Brassica oleracea HOM05D004586 ORTHO05D005266 1.3e-63 248.8 477 40.5
C08p00660 Brassica napus HOM05D004586 ORTHO05D005266 2.5e-62 244.6 471 39.9
Ca_27565_v3 Cicer arietinum L. HOM05D004586 ORTHO05D005266 3.6e-61 240.7 201 61.7
EL10As5g23555 Beta vulgaris HOM05D004586 ORTHO05D005266 2.3e-60 238.0 855 34.7
A08p37340 Brassica napus HOM05D004586 ORTHO05D005266 8.9e-60 236.1 463 38.7
BraA08t35631Z Brassica rapa HOM05D004586 ORTHO05D005266 7.5e-59 233.0 264 50.4
Dinv15471 Davidia involucrata HOM05D004586 ORTHO05D005266 1.7e-58 231.9 411 42.1
CDE02G0135 Ceratophyllum demersum HOM05D004586 ORTHO05D005266 1.4e-57 228.8 166 66.9
Lj3g0000702 Lotus japonicus HOM05D004586 ORTHO05D005266 2.4e-57 228.0 301 50.2
SHI10466 Sapria himalayana HOM05D004586 ORTHO05D005266 9.2e-57 226.1 305 47.5
AUR62000198 Chenopodium quinoa HOM05D004586 ORTHO05D005266 3.5e-56 224.2 901 33.2
Aa31LG1G20890 Aethionema arabicum HOM05D004586 ORTHO05D005266 6.0e-56 223.4 582 31.8
Os05g0502800 Oryza sativa ssp. japonica HOM05D004586 ORTHO05D005266 7.8e-56 223.0 449 39.0
Medtr2g090095 Medicago truncatula HOM05D004586 ORTHO05D005266 1.7e-55 221.9 311 44.1
Nn1g03938 Nelumbo nucifera HOM05D004586 ORTHO05D005266 3.9e-55 220.7 154 71.4
SEGI_15076 Sequoiadendron giganteum HOM05D004586 ORTHO05D005266 5.6e-54 216.9 198 53.5
HPP92_014062 Vanilla planifolia HOM05D004586 ORTHO05D005266 2.8e-53 214.5 454 39.0
BolC8t46864H Brassica oleracea HOM05D004586 ORTHO05D005266 6.2e-53 213.4 257 47.1
Zm00001eb292050 Zea mays HOM05D004586 ORTHO05D005266 8.1e-53 213.0 174 59.8
Ah.01g003940 Amaranthus hybridus HOM05D004586 ORTHO05D005266 1.4e-52 212.2 318 45.6
arahy.Tifrunner.gnm1.ann1.IS01QF Arachis hypogaea HOM05D004586 ORTHO05D005266 2.0e-51 208.4 174 63.2
Nitab4.5_0007732g0010 Nicotiana tabacum HOM05D004586 ORTHO05D005266 4.4e-51 207.2 155 64.5
arahy.Tifrunner.gnm1.ann1.7D4Z5S Arachis hypogaea HOM05D004586 ORTHO05D005266 2.9e-50 204.5 174 62.6
Psat5g270160 Pisum sativum HOM05D004586 ORTHO05D005266 1.2e-48 199.1 415 37.1
TPR.G27075 Trifolium pratense HOM05D004586 ORTHO05D005266 2.7e-48 198.0 424 38.4
Thhalv10024822m.g Eutrema salsugineum HOM05D004586 ORTHO05D005266 5.1e-47 193.7 341 40.5
CDE02G4059 Ceratophyllum demersum HOM05D004586 ORTHO05D005266 3.8e-42 177.6 332 39.2
Lalb_Chr22g0356411 Lupinus albus HOM05D004586 ORTHO05D005266 1.1e-41 176.0 173 53.8
CBR_g12767 Chara braunii HOM05D004586 ORTHO05D005266 9.3e-41 172.9 194 49.0
SMO137G0274 Selaginella moellendorffii HOM05D004586 ORTHO05D005266 1.6e-40 172.2 136 58.1
SEGI_36208 Sequoiadendron giganteum HOM05D004586 ORTHO05D005266 1.1e-38 166.0 138 57.2
MBI02_g27225_MAGBIO Magnolia biondii HOM05D004586 ORTHO05D005266 1.6e-37 162.2 516 33.5
Pp3c14_14050 Physcomitrium patens HOM05D004586 ORTHO05D005266 6.2e-37 160.2 147 52.4
AagrBONN_evm.TU.Sc2ySwM_117.2920 Anthoceros agrestis HOM05D004586 ORTHO05D005266 4.5e-35 154.1 286 38.8
Pp3c10_10230 Physcomitrium patens HOM05D004586 ORTHO05D005266 9.9e-35 152.9 136 54.4
Mapoly0108s0039 Marchantia polymorpha HOM05D004586 ORTHO05D005266 1.1e-33 149.4 241 41.5
BcaB08g36102 Brassica carinata HOM05D004586 ORTHO05D005266 5.3e-28 130.6 156 49.4
Psat0s10217g0080 Pisum sativum HOM05D004586 ORTHO05D005266 2.0e-27 128.6 92 72.8
BcaB01g00913 Brassica carinata HOM05D004586 ORTHO05D005266 2.9e-26 124.8 156 48.7
DCAR_012988 Daucus carota HOM05D004586 ORTHO05D005266 1.2e-19 102.8 254 37.0
PSO339G0898 Papaver somniferum HOM05D004586 ORTHO05D005266 4.2e-17 94.4 81 58.0
Medtr7g116780 Medicago truncatula HOM05D004586 ORTHO05D005266 3.5e-16 91.3 71 62.0
Cre10.g467100 Chlamydomonas reinhardtii HOM05D004586 ORTHO05D005266 2.4e-12 78.6 124 37.1
MCO05G032 Micromonas commoda HOM05D004586 ORTHO05D005266 9.0e-12 76.6 171 31.6
AL2G23840 Arabidopsis lyrata HOM05D020923 ORTHO05D021440 5.5e-09 67.4 100 40.0
Hma1.2p1_1100F.1_g257070 Hydrangea macrophylla HOM05D004586 ORTHO05D005266 7.9e-08 63.5 197 34.0
Carub.0006s3370 Capsella rubella HOM05D020923 ORTHO05D021440 1.4e-07 62.8 102 40.2
SEGI_25704 Sequoiadendron giganteum HOM05D004586 ORTHO05D005266 6.7e-07 60.5 69 44.9


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