Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc33.197 Carica papaya HOM05D006173 ORTHO05D007685 1.4e-270 935.6 449 100.0
Potri.016G030400 Populus trichocarpa HOM05D006173 ORTHO05D007685 5.2e-209 731.1 453 75.7
Ciclev10011725m.g Citrus clementina HOM05D006173 ORTHO05D007685 8.8e-209 730.3 454 76.9
Actinidia17973 Actinidia chinensis HOM05D006173 ORTHO05D007685 1.8e-206 722.6 454 76.0
Manes.10G077600 Manihot esculenta HOM05D006173 ORTHO05D007685 1.6e-205 719.5 451 76.5
Thecc.05G131000 Theobroma cacao HOM05D006173 ORTHO05D007685 1.6e-205 719.5 444 78.2
Cfa019941 Carpinus fangiana HOM05D006173 ORTHO05D007685 7.7e-205 717.2 454 76.9
Haze_20298 Corylus avellana HOM05D006173 ORTHO05D007685 7.7e-205 717.2 469 74.4
Atru.chr1.1516 Acer truncatum HOM05D006173 ORTHO05D007685 1.1e-203 713.4 454 76.0
Gorai.007G351000 Gossypium raimondii HOM05D006173 ORTHO05D007685 2.5e-203 712.2 444 77.3
Gohir.D11G320800 Gossypium hirsutum HOM05D006173 ORTHO05D007685 4.7e-202 708.0 444 76.6
Gohir.A11G305400 Gossypium hirsutum HOM05D006173 ORTHO05D007685 1.8e-201 706.1 444 76.8
TWI74G0774 Tripterygium wilfordii HOM05D006173 ORTHO05D007685 1.2e-200 703.4 456 73.9
Hma1.2p1_0044F.1_g026020 Hydrangea macrophylla HOM05D006173 ORTHO05D007685 2.4e-198 695.7 467 72.6
Prupe.7G021600 Prunus persica HOM05D006173 ORTHO05D007685 2.4e-198 695.7 454 73.8
CiPaw.10G124100 Carya illinoinensis HOM05D006173 ORTHO05D007685 7.0e-198 694.1 454 74.4
Sabra16G0033900 Salix brachista HOM05D006173 ORTHO05D007685 7.7e-197 690.6 495 68.3
Dinv10196 Davidia involucrata HOM05D006173 ORTHO05D007685 2.9e-196 688.7 450 74.2
Lj1g0020171 Lotus japonicus HOM05D006173 ORTHO05D007685 3.2e-195 685.3 454 71.4
Thhalv10005968m.g Eutrema salsugineum HOM05D006173 ORTHO05D007685 1.2e-194 683.3 451 71.6
Duzib106G1718 Durio zibethinus HOM05D006173 ORTHO05D007685 8.0e-194 680.6 444 73.9
Medtr7g088540 Medicago truncatula HOM05D006173 ORTHO05D007685 1.4e-193 679.9 457 70.0
ClCG10G016510 Citrullus lanatus HOM05D006173 ORTHO05D007685 3.4e-192 675.2 491 66.8
BcaC07g40109 Brassica carinata HOM05D006173 ORTHO05D007685 4.4e-192 674.9 447 70.2
PGR142G0634 Punica granatum HOM05D006173 ORTHO05D007685 5.7e-192 674.5 457 71.1
BolC8t50833H Brassica oleracea HOM05D006173 ORTHO05D007685 1.1e-190 670.2 449 69.7
CsaV3_3G039830 Cucumis sativus L. HOM05D006173 ORTHO05D007685 1.4e-190 669.8 454 70.7
A09p49770 Brassica napus HOM05D006173 ORTHO05D007685 2.4e-190 669.1 449 69.7
BraA09t40430Z Brassica rapa HOM05D006173 ORTHO05D007685 2.4e-190 669.1 449 69.7
Glyma.19G125000 Glycine max HOM05D006173 ORTHO05D007685 5.4e-190 667.9 452 71.0
EL10Ac3g07343 Beta vulgaris HOM05D006173 ORTHO05D007685 7.0e-190 667.5 451 69.6
arahy.Tifrunner.gnm1.ann1.NS6SL1 Arachis hypogaea HOM05D006173 ORTHO05D007685 1.6e-189 666.4 467 69.4
Eucgr.K01689 Eucalyptus grandis HOM05D006173 ORTHO05D007685 1.6e-189 666.4 460 69.1
C08p32150 Brassica napus HOM05D006173 ORTHO05D007685 2.7e-189 665.6 449 69.7
Glyma.03G120400 Glycine max HOM05D006173 ORTHO05D007685 4.5e-189 664.8 452 70.4
THA.LOC104814894 Tarenaya hassleriana HOM05D006173 ORTHO05D007685 2.9e-188 662.1 448 70.5
VMungo0331G1996 Vigna mungo HOM05D006173 ORTHO05D007685 2.9e-188 662.1 452 70.1
Phvul.001G116600 Phaseolus vulgaris HOM05D006173 ORTHO05D007685 5.0e-188 661.4 452 70.1
Sed0007984 Sechium edule HOM05D006173 ORTHO05D007685 1.5e-187 659.8 454 70.3
FAN10G0117 Fragaria x ananassa HOM05D006173 ORTHO05D007685 1.9e-187 659.4 457 69.8
Carub.0005s2364 Capsella rubella HOM05D006173 ORTHO05D007685 1.6e-186 656.4 451 70.1
BcaC07g40002 Brassica carinata HOM05D006173 ORTHO05D007685 4.7e-186 654.8 445 69.0
AT3G56900 Arabidopsis thaliana HOM05D006173 ORTHO05D007685 5.2e-185 651.4 451 69.2
AL5G38300 Arabidopsis lyrata HOM05D006173 ORTHO05D007685 8.9e-185 650.6 451 69.0
Aa31LG10G11760 Aethionema arabicum HOM05D006173 ORTHO05D007685 1.2e-184 650.2 522 61.5
CARHR167050 Cardamine hirsuta HOM05D006173 ORTHO05D007685 2.0e-184 649.4 451 70.1
MELO3C009724.2 Cucumis melo HOM05D006173 ORTHO05D007685 9.8e-184 647.1 454 68.7
FvH4_7g04320 Fragaria vesca HOM05D006173 ORTHO05D007685 4.9e-183 644.8 449 69.3
Sp5g05690 Schrenkiella parvula HOM05D006173 ORTHO05D007685 1.1e-182 643.7 451 68.7
Cc06_g22820 Coffea canephora HOM05D006173 ORTHO05D007685 3.1e-182 642.1 468 66.0
arahy.Tifrunner.gnm1.ann1.TSE1DU Arachis hypogaea HOM05D006173 ORTHO05D007685 1.7e-180 636.3 458 67.7
Oeu060754.2 Olea europaea HOM05D006173 ORTHO05D007685 5.0e-180 634.8 486 65.2
TPR.G27968 Trifolium pratense HOM05D006173 ORTHO05D007685 6.6e-180 634.4 413 72.4
MD12G1112000 Malus domestica HOM05D006173 ORTHO05D007685 3.3e-179 632.1 543 60.4
PGSC0003DMG400017881 Solanum tuberosum HOM05D006173 ORTHO05D007685 2.8e-178 629.0 450 67.6
FAN01G1644 Fragaria x ananassa HOM05D006173 ORTHO05D007685 1.2e-176 623.6 550 58.0
MSTRG.10773 Avicennia marina HOM05D006173 ORTHO05D007685 2.0e-176 622.9 447 67.3
Sopen08g011280 Solanum pennellii HOM05D006173 ORTHO05D007685 1.7e-175 619.8 450 66.7
Solyc08g016801.1 Solanum lycopersicum HOM05D006173 ORTHO05D007685 2.9e-175 619.0 450 66.4
Migut.K00169 Erythranthe guttata HOM05D006173 ORTHO05D007685 6.4e-175 617.8 443 67.3
Peaxi162Scf00937g00117 Petunia axillaris HOM05D006173 ORTHO05D007685 1.4e-174 616.7 430 69.1
PSO541G4485 Papaver somniferum HOM05D006173 ORTHO05D007685 1.9e-174 616.3 443 67.7
PSO675G1003 Papaver somniferum HOM05D006173 ORTHO05D007685 1.7e-172 609.8 443 67.7
CSS0033436 Camellia sinensis var. sinensis HOM05D006173 ORTHO05D007685 3.3e-171 605.5 433 68.6
FAN06G1001 Fragaria x ananassa HOM05D006173 ORTHO05D007685 7.3e-171 604.4 467 65.1
AUR62020996 Chenopodium quinoa HOM05D006173 ORTHO05D007685 2.1e-170 602.8 437 67.5
ECA247G0085 Erigeron canadensis HOM05D006173 ORTHO05D007685 2.0e-168 596.3 450 64.9
TAR623G0939 Trochodendron aralioides HOM05D006173 ORTHO05D007685 1.1e-163 580.5 404 72.3
HanXRQChr14g0457301 Helianthus annuus HOM05D006173 ORTHO05D007685 2.5e-163 579.3 444 64.2
Hund19061 Selenicereus undatus HOM05D006173 ORTHO05D007685 5.6e-163 578.2 432 65.0
Zm00001eb405260 Zea mays HOM05D006173 ORTHO05D007685 2.8e-162 575.9 446 60.5
Lsat_1_v5_gn_9_32341 Lactuca sativa HOM05D006173 ORTHO05D007685 1.4e-161 573.5 448 62.5
Os12g0129400 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 1.2e-160 570.5 447 59.3
Os11g0132700 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 4.4e-160 568.5 447 58.8
SEGI_22413 Sequoiadendron giganteum HOM05D006173 ORTHO05D007685 2.2e-159 566.2 466 60.3
Sc19g0007880 Simmondsia chinensis HOM05D006173 ORTHO05D007685 7.1e-158 561.2 403 68.2
CDE02G3082 Ceratophyllum demersum HOM05D006173 ORTHO05D007685 3.3e-155 552.4 452 63.1
vmacro07758 Vaccinium macrocarpon HOM05D006173 ORTHO05D007685 6.2e-154 548.1 480 59.0
Aqoxy3G01734 Aquilegia oxysepala HOM05D006173 ORTHO05D007685 2.2e-151 539.7 339 75.2
SalBow1G0987 Salvia bowleyana HOM05D006173 ORTHO05D007685 3.2e-142 509.2 477 54.9
AUR62018437 Chenopodium quinoa HOM05D006173 ORTHO05D007685 4.2e-142 508.8 410 62.0
Psat3g082320 Pisum sativum HOM05D006173 ORTHO05D007685 1.2e-133 480.7 355 65.6
SGA_v2.0_scaffold106G30556 Striga asiatica HOM05D006173 ORTHO05D007685 4.3e-131 472.2 461 53.4
MBI19_g25019_MAGBIO Magnolia biondii HOM05D006173 ORTHO05D007685 1.5e-128 463.8 396 62.1
Mapoly0010s0124 Marchantia polymorpha HOM05D006173 ORTHO05D007685 1.0e-124 451.1 481 46.6
RhsimUnG0020600 Rhododendron simsii HOM05D006173 ORTHO05D007685 1.3e-124 450.7 454 54.2
Ca_08352_v3 Cicer arietinum L. HOM05D006173 ORTHO05D007685 7.9e-117 424.9 301 65.8
SMO116G0186 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 2.3e-116 423.3 455 45.5
SMO133G0039 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 3.0e-116 422.9 455 45.5
Pp3c11_18220 Physcomitrium patens HOM05D006173 ORTHO05D007685 9.7e-115 417.9 462 44.2
VMungo1383G1641 Vigna mungo HOM05D006173 ORTHO05D007685 1.8e-113 413.7 403 55.3
GSVIVG01025850001 Vitis vinifera HOM05D006173 ORTHO05D007685 8.5e-111 404.8 214 86.4
MD14G1101100 Malus domestica HOM05D006173 ORTHO05D007685 2.9e-103 379.8 210 82.9
Nitab4.5_0003840g0020 Nicotiana tabacum HOM05D006173 ORTHO05D007685 1.4e-102 377.5 287 63.8
Solyc08g016808.1 Solanum lycopersicum HOM05D006173 ORTHO05D007685 1.6e-101 374.0 335 57.0
Lalb_Chr22g0358001 Lupinus albus HOM05D006173 ORTHO05D007685 3.6e-101 372.9 201 84.6
RcHm_v2.0_Chr1g0329271 Rosa chinensis HOM05D006173 ORTHO05D007685 6.1e-101 372.1 201 85.6
Nitab4.5_0000211g0120 Nicotiana tabacum HOM05D006173 ORTHO05D007685 2.0e-99 367.1 262 67.6
QL07p014498 Quercus lobata HOM05D006173 ORTHO05D007685 2.6e-99 366.7 187 90.4
ATR0307G134 Amborella trichopoda HOM05D006173 ORTHO05D007685 1.2e-96 357.8 200 81.0
RcHm_v2.0_Chr1g0329281 Rosa chinensis HOM05D006173 ORTHO05D007685 3.0e-84 316.6 229 65.5
Lalb_Chr22g0357991 Lupinus albus HOM05D006173 ORTHO05D007685 1.1e-81 308.1 247 59.1
FAN03G1994 Fragaria x ananassa HOM05D006173 ORTHO05D007685 3.5e-80 303.1 237 62.9
SMO069G0001 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 3.5e-80 303.1 231 57.6
Lj1A24G67 Lonicera japonica HOM05D006173 ORTHO05D007685 5.2e-76 289.3 264 57.2
HPP92_002170 Vanilla planifolia HOM05D006173 ORTHO05D007685 2.6e-75 287.0 168 74.4
MD14G1101000 Malus domestica HOM05D006173 ORTHO05D007685 1.3e-74 284.6 251 58.2
Lj1A24G66 Lonicera japonica HOM05D006173 ORTHO05D007685 6.3e-74 282.3 151 86.8
unitig_46.g18486 Utricularia gibba HOM05D006173 ORTHO05D007685 2.0e-72 277.3 201 64.7
ATR0307G100 Amborella trichopoda HOM05D006173 ORTHO05D007685 2.9e-71 273.5 234 56.0
CANSAT64G0701 Cannabis sativa HOM05D006173 ORTHO05D007685 3.2e-65 253.4 138 85.5
Solyc08g036600.3 Solanum lycopersicum HOM05D006173 ORTHO05D007685 5.4e-65 252.7 207 59.9
QL07p014493 Quercus lobata HOM05D006173 ORTHO05D007685 1.6e-64 251.1 171 68.4
HPP92_002168 Vanilla planifolia HOM05D006173 ORTHO05D007685 2.7e-64 250.4 212 58.5
GSVIVG01025851001 Vitis vinifera HOM05D006173 ORTHO05D007685 5.2e-60 236.1 181 63.5
DCAR_020632 Daucus carota HOM05D002466 ORTHO05D002668 3.7e-58 229.9 190 60.5
CBR_g54315 Chara braunii HOM05D006173 ORTHO05D007685 1.2e-56 224.9 341 37.2
TAR623G0990 Trochodendron aralioides HOM05D006173 ORTHO05D007685 6.0e-40 169.5 97 83.5
Nitab4.5_0000275g0010 Nicotiana tabacum HOM05D006173 ORTHO05D007685 3.9e-39 166.8 87 82.8
SGA_v2.0_scaffold106G30559 Striga asiatica HOM05D000268 ORTHO05D000261 5.1e-39 166.4 340 34.7
Lj2A730T36 Lonicera japonica HOM05D006173 ORTHO05D007685 2.5e-38 164.1 244 42.6
PRCOL_00002577 Prasinoderma coloniale HOM05D006173 ORTHO05D007685 1.2e-37 161.8 278 33.1
Nitab4.5_0000211g0140 Nicotiana tabacum HOM05D006173 ORTHO05D007685 1.2e-32 145.2 85 78.8
Nitab4.5_0003840g0030 Nicotiana tabacum HOM05D006173 ORTHO05D007685 1.4e-28 131.7 89 70.8
MCO12G281 Micromonas commoda HOM05D006173 ORTHO05D007685 4.3e-22 110.2 273 28.9
Lj2A730T35 Lonicera japonica HOM05D006173 ORTHO05D007685 2.7e-16 90.9 57 80.7
Lsat_1_v5_gn_4_93961 Lactuca sativa HOM05D006173 ORTHO05D007685 2.3e-15 87.8 52 76.9
Os12g0131300 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 1.1e-12 79.0 50 68.0
Cre10.g466300 Chlamydomonas reinhardtii HOM05D006173 ORTHO05D007685 1.4e-09 68.6 344 23.3


User provided reference genes

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