Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc32.54 Carica papaya HOM05D005601 ORTHO05D007265 7.1e-68 260.4 124 100.0
Carub.0001s1603 Capsella rubella HOM05D005601 ORTHO05D007265 1.8e-31 139.4 112 60.7
Potri.010G172300 Populus trichocarpa HOM05D005601 ORTHO05D007265 7.0e-31 137.5 76 80.3
Sabra10G0131500 Salix brachista HOM05D005601 ORTHO05D007265 7.0e-31 137.5 76 80.3
TAR627G0482 Trochodendron aralioides HOM05D005601 ORTHO05D007265 9.1e-31 137.1 111 59.5
Thhalv10007775m.g Eutrema salsugineum HOM05D005601 ORTHO05D007265 1.6e-30 136.3 109 61.5
Sabra08G0062400 Salix brachista HOM05D005601 ORTHO05D007265 1.6e-30 136.3 76 81.6
CARHR016760 Cardamine hirsuta HOM05D005601 ORTHO05D007265 2.0e-30 136.0 112 58.9
Potri.008G084100 Populus trichocarpa HOM05D005601 ORTHO05D007265 2.6e-30 135.6 76 80.3
Sp1g14480 Schrenkiella parvula HOM05D005601 ORTHO05D007583 4.5e-30 134.8 109 60.6
THA.LOC104812373 Tarenaya hassleriana HOM05D005601 ORTHO05D007265 4.5e-30 134.8 109 61.5
BcaB02g06608 Brassica carinata HOM05D005601 ORTHO05D007265 5.9e-30 134.4 109 59.6
BcaC05g25587 Brassica carinata HOM05D005601 ORTHO05D007265 5.9e-30 134.4 109 59.6
A06p12210 Brassica napus HOM05D005601 ORTHO05D007265 5.9e-30 134.4 109 59.6
C05p14450 Brassica napus HOM05D005601 ORTHO05D007265 5.9e-30 134.4 109 59.6
BolC5t30171H Brassica oleracea HOM05D005601 ORTHO05D007265 5.9e-30 134.4 109 59.6
BraA06t24389Z Brassica rapa HOM05D005601 ORTHO05D007265 5.9e-30 134.4 109 59.6
Dinv42472 Davidia involucrata HOM05D005601 ORTHO05D007265 5.9e-30 134.4 75 80.0
CANSAT56G2459 Cannabis sativa HOM05D005601 ORTHO05D007265 7.7e-30 134.0 110 60.9
TWI38G0323 Tripterygium wilfordii HOM05D005601 ORTHO05D007265 7.7e-30 134.0 82 75.6
Nn7g38204 Nelumbo nucifera HOM05D005601 ORTHO05D007265 1.3e-29 133.3 76 76.3
Dinv19582 Davidia involucrata HOM05D005601 ORTHO05D007265 1.7e-29 132.9 111 60.4
Sc09g0007790 Simmondsia chinensis HOM05D005601 ORTHO05D007265 1.7e-29 132.9 76 75.0
CiPaw.11G059700 Carya illinoinensis HOM05D005601 ORTHO05D007265 2.2e-29 132.5 110 60.0
Rhsim06G0242900 Rhododendron simsii HOM05D005601 ORTHO05D007265 2.9e-29 132.1 75 78.7
ClCG09G022740 Citrullus lanatus HOM05D005601 ORTHO05D007265 3.8e-29 131.7 110 59.1
Manes.14G007400 Manihot esculenta HOM05D005601 ORTHO05D007265 5.0e-29 131.3 76 76.3
AL1G28410 Arabidopsis lyrata HOM05D005601 ORTHO05D007265 1.1e-28 130.2 112 57.1
AT1G16290 Arabidopsis thaliana HOM05D005601 ORTHO05D007265 1.1e-28 130.2 112 56.2
CsaV3_7G022950 Cucumis sativus L. HOM05D005601 ORTHO05D007265 1.5e-28 129.8 75 77.3
vmacro11692 Vaccinium macrocarpon HOM05D005601 ORTHO05D007265 1.5e-28 129.8 75 77.3
Psat1g014320 Pisum sativum HOM05D005601 ORTHO05D007265 1.9e-28 129.4 76 73.7
Sed0023216 Sechium edule HOM05D005601 ORTHO05D007265 1.9e-28 129.4 75 77.3
MELO3C012601.2 Cucumis melo HOM05D005601 ORTHO05D007265 2.5e-28 129.0 110 57.3
Gorai.002G109700 Gossypium raimondii HOM05D005601 ORTHO05D007265 2.5e-28 129.0 76 73.7
MBI02_g08257_MAGBIO Magnolia biondii HOM05D005601 ORTHO05D007265 2.5e-28 129.0 75 76.0
Ciclev10006846m.g Citrus clementina HOM05D005601 ORTHO05D007265 4.2e-28 128.3 76 72.4
Aa31LG7G820 Aethionema arabicum HOM05D005601 ORTHO05D007265 5.5e-28 127.9 109 58.7
Aqoxy1G01411 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 5.5e-28 127.9 130 50.8
GSVIVG01020400001 Vitis vinifera HOM05D005601 ORTHO05D007265 5.5e-28 127.9 75 72.0
Gohir.A01G099600 Gossypium hirsutum HOM05D005601 ORTHO05D007265 7.2e-28 127.5 76 72.4
Gorai.013G145200 Gossypium raimondii HOM05D005601 ORTHO05D007265 7.2e-28 127.5 82 65.9
Atru.chr1.81 Acer truncatum HOM05D005601 ORTHO05D007265 9.4e-28 127.1 109 57.8
Gohir.A13G125400 Gossypium hirsutum HOM05D005601 ORTHO05D007265 9.4e-28 127.1 81 66.7
PGR031G2718 Punica granatum HOM05D005601 ORTHO05D007265 9.4e-28 127.1 111 56.8
QL04p090699 Quercus lobata HOM05D005601 ORTHO05D007265 9.4e-28 127.1 75 76.0
QL09p016707 Quercus lobata HOM05D005601 ORTHO05D007265 9.4e-28 127.1 75 76.0
PGSC0003DMG400022116 Solanum tuberosum HOM05D005601 ORTHO05D007265 1.6e-27 126.3 72 79.2
arahy.Tifrunner.gnm1.ann1.5WL8RC Arachis hypogaea HOM05D005601 ORTHO05D007265 2.1e-27 125.9 103 57.3
Solyc07g066640.3 Solanum lycopersicum HOM05D005601 ORTHO05D007265 2.1e-27 125.9 72 79.2
Sopen07g034790 Solanum pennellii HOM05D005601 ORTHO05D007265 2.1e-27 125.9 72 79.2
Ca_03553_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 2.7e-27 125.6 75 72.0
Ca_29556_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 2.7e-27 125.6 75 72.0
Aqoxy72s008 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 3.6e-27 125.2 75 73.3
Lj3g0011890 Lotus japonicus HOM05D005601 ORTHO05D007265 3.6e-27 125.2 76 71.1
Nitab4.5_0000029g0250 Nicotiana tabacum HOM05D005601 ORTHO05D007265 3.6e-27 125.2 72 77.8
Cc05_g16470 Coffea canephora HOM05D005601 ORTHO05D007265 4.7e-27 124.8 75 74.7
Gohir.D13G129200 Gossypium hirsutum HOM05D005601 ORTHO05D007265 4.7e-27 124.8 82 64.6
Lalb_Chr25g0284511 Lupinus albus HOM05D005601 ORTHO05D007265 4.7e-27 124.8 85 67.1
Migut.M01519 Erythranthe guttata HOM05D005601 ORTHO05D007265 1.0e-26 123.6 72 73.6
Lalb_Chr20g0108481 Lupinus albus HOM05D005601 ORTHO05D007265 1.0e-26 123.6 85 65.9
CSS0009872 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 1.4e-26 123.2 70 78.6
CSS0045419 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 1.4e-26 123.2 70 78.6
Nitab4.5_0006109g0020 Nicotiana tabacum HOM05D005601 ORTHO05D007265 1.4e-26 123.2 72 76.4
PSO675G6728 Papaver somniferum HOM05D005601 ORTHO05D007265 1.8e-26 122.9 76 72.4
Prupe.4G131800 Prunus persica HOM05D005601 ORTHO05D007265 2.3e-26 122.5 111 55.0
Glyma.08G165100 Glycine max HOM05D005601 ORTHO05D007265 3.0e-26 122.1 76 69.7
Peaxi162Scf00452g00334 Petunia axillaris HOM05D005601 ORTHO05D007265 3.0e-26 122.1 72 76.4
SGA_v2.0_scaffold7G03617 Striga asiatica HOM05D005601 ORTHO05D007265 3.0e-26 122.1 72 72.2
MD05G1234300 Malus domestica HOM05D005601 ORTHO05D007265 4.0e-26 121.7 85 64.7
Lj2A13G19 Lonicera japonica HOM05D005601 ORTHO05D007265 5.2e-26 121.3 67 80.6
SalBow8G4673 Salvia bowleyana HOM05D005601 ORTHO05D007265 5.2e-26 121.3 74 70.3
CAN.G943.56 Capsicum annuum HOM05D005601 ORTHO05D007265 6.7e-26 120.9 72 75.0
unitig_26.g10062 Utricularia gibba HOM05D000493 ORTHO05D008479 6.7e-26 120.9 72 72.2
Oeu034984.1 Olea europaea HOM05D005601 ORTHO05D007265 8.8e-26 120.6 72 73.6
FvH4_3g14650 Fragaria vesca HOM05D005601 ORTHO05D007265 1.5e-25 119.8 75 72.0
Zm00001eb207280 Zea mays HOM05D005601 ORTHO05D007265 1.5e-25 119.8 86 64.0
SEGI_02544 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 3.3e-25 118.6 87 62.1
MD10G1210800 Malus domestica HOM05D005601 ORTHO05D007265 5.7e-25 117.9 76 67.1
RcHm_v2.0_Chr5g0024141 Rosa chinensis HOM05D005601 ORTHO05D007265 5.7e-25 117.9 76 67.1
MSTRG.7080 Avicennia marina HOM05D005601 ORTHO05D007265 1.7e-24 116.3 72 69.4
FAN21G2538 Fragaria x ananassa HOM05D005601 ORTHO05D007265 1.7e-24 116.3 75 70.7
TPR.G22999 Trifolium pratense HOM05D005601 ORTHO05D007265 1.7e-24 116.3 84 59.5
HPP92_016686 Vanilla planifolia HOM05D005601 ORTHO05D007265 2.2e-24 115.9 76 67.1
Eucgr.F04464 Eucalyptus grandis HOM05D005601 ORTHO05D007265 3.7e-24 115.2 111 52.3
SHI32862 Sapria himalayana HOM05D005601 ORTHO05D007265 1.8e-23 112.8 61 78.7
FAN11G1412 Fragaria x ananassa HOM05D005601 ORTHO05D007265 2.4e-23 112.5 83 65.1
DCAR_016842 Daucus carota HOM05D005601 ORTHO05D000532 7.0e-23 110.9 75 64.0
SMO196G0059 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 9.1e-23 110.5 71 64.8
Thecc.07G184900 Theobroma cacao HOM05D005601 ORTHO05D007265 3.5e-22 108.6 68 70.6
SMO137G0068 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 1.9e-20 102.8 69 59.4
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 1.9e-20 102.8 69 59.4
Medtr2g065540 Medicago truncatula HOM05D005601 ORTHO05D007265 2.5e-20 102.4 59 72.9
Pp3c5_22590 Physcomitrium patens HOM05D005601 ORTHO05D007265 6.1e-19 97.8 70 61.4
FAN16G1778 Fragaria x ananassa HOM05D005601 ORTHO05D007265 1.4e-18 96.7 75 61.3
CBR_g32054 Chara braunii HOM05D005601 ORTHO05D007265 2.6e-17 92.4 80 50.0
Oeu019720.3 Olea europaea HOM05D005601 ORTHO05D007265 6.3e-16 87.8 87 49.4
Mapoly0008s0010 Marchantia polymorpha HOM05D005601 ORTHO05D007265 1.4e-15 86.7 77 48.1
SEGI_07505 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 1.1e-12 77.0 70 51.4
AagrBONN_evm.TU.Sc2ySwM_117.1218 Anthoceros agrestis HOM05D005601 ORTHO05D007265 4.7e-11 71.6 85 38.8
unitig_26.g10063 Utricularia gibba HOM05D005601 ORTHO05D007265 1.5e-09 66.6 63 47.6
Cc05_g16460 Coffea canephora HOM05D005601 ORTHO05D007265 2.0e-09 66.2 63 44.4
Haze_07789 Corylus avellana HOM05D005601 ORTHO05D007265 6.3e-08 61.2 56 51.8
Gohir.D01G084000 Gossypium hirsutum HOM05D005601 ORTHO05D007265 1.1e-07 60.5 101 34.7
SHI32867 Sapria himalayana HOM05D005601 ORTHO05D007265 2.4e-07 59.3 82 39.0
ATR0752G173 Amborella trichopoda HOM05D005601 ORTHO05D007265 1.2e-06 57.0 53 47.2
BraA06t24405Z Brassica rapa HOM05D005601 ORTHO05D007265 1.6e-06 56.6 76 42.1
Dinv19583 Davidia involucrata HOM05D005601 ORTHO05D007265 1.6e-06 56.6 70 40.0
Cc01_g09470 Coffea canephora HOM05D005601 ORTHO05D007265 3.5e-06 55.5 53 43.4
Actinidia24664 Actinidia chinensis HOM05D005601 ORTHO05D007265 4.5e-06 55.1 54 44.4
BcaC05g25566 Brassica carinata HOM05D005601 ORTHO05D007265 5.9e-06 54.7 76 40.8
A06p12420 Brassica napus HOM05D005601 ORTHO05D007265 5.9e-06 54.7 76 40.8


User provided reference genes

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