Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc32.39 Carica papaya HOM05D000004 ORTHO05D011645 8.7e-57 223.4 112 100.0
Cpa.g.sc31.87 Carica papaya HOM05D000004 ORTHO05D000563 3.6e-34 148.3 108 68.5
Cpa.g.sc15.23 Carica papaya HOM05D000004 ORTHO05D000563 9.7e-32 140.2 108 66.7
Cpa.g.sc2836.1 Carica papaya HOM05D000004 ORTHO05D000002 1.4e-30 136.3 167 46.7
Cpa.g.sc35.74 Carica papaya HOM05D000004 ORTHO05D000563 1.0e-28 130.2 114 62.3
Cpa.g.sc2292.1 Carica papaya HOM05D000004 ORTHO05D000563 2.9e-28 128.6 147 51.0
Cpa.g.sc38.36 Carica papaya HOM05D000004 ORTHO05D000563 2.9e-28 128.6 151 49.7
Cpa.g.sc1.176 Carica papaya HOM05D000004 ORTHO05D000563 4.7e-26 121.3 99 62.6
Cpa.g.sc31.29 Carica papaya HOM05D000004 ORTHO05D000563 1.5e-24 116.3 136 48.5
Cpa.g.sc243.3 Carica papaya HOM05D000004 ORTHO05D011645 3.3e-24 115.2 75 73.3
Cpa.g.sc100.28 Carica papaya HOM05D000004 ORTHO05D000563 2.8e-23 112.1 160 43.8
Cpa.g.sc11.159 Carica papaya HOM05D000004 ORTHO05D000563 4.8e-23 111.3 127 49.6
Cpa.g.sc38.74 Carica papaya HOM05D000004 ORTHO05D000563 6.3e-23 110.9 159 42.8
Cpa.g.sc2878.1 Carica papaya HOM05D000004 ORTHO05D011645 3.1e-22 108.6 73 72.6
Cpa.g.sc582.1 Carica papaya HOM05D000004 ORTHO05D011645 2.6e-21 105.5 75 66.7
Cpa.g.sc42.6 Carica papaya HOM05D000004 ORTHO05D011645 5.9e-21 104.4 71 74.6
Cpa.g.sc41.27 Carica papaya HOM05D000004 ORTHO05D000563 1.3e-20 103.2 121 47.9
QL10p037628 Quercus lobata HOM05D000004 ORTHO05D000002 1.3e-20 103.2 110 50.0
Cpa.g.sc239.4 Carica papaya HOM05D000004 ORTHO05D000563 2.5e-19 99.0 149 39.6
Cpa.g.sc0.128 Carica papaya HOM05D000004 ORTHO05D000563 3.6e-18 95.1 99 52.5
Cpa.g.sc11.67 Carica papaya HOM05D000004 ORTHO05D000563 1.0e-17 93.6 99 49.5
Cpa.g.sc66.62 Carica papaya HOM05D000004 ORTHO05D011645 4.0e-17 91.7 58 74.1
Cpa.g.sc172.3 Carica papaya HOM05D000004 ORTHO05D000002 2.6e-16 89.0 117 43.6
Cpa.g.sc95.80 Carica papaya HOM05D000004 ORTHO05D000563 2.2e-15 85.9 157 35.0
Cpa.g.sc1785.1 Carica papaya HOM05D000004 ORTHO05D000563 2.8e-15 85.5 83 49.4
Cpa.g.sc39.88 Carica papaya HOM05D000004 ORTHO05D000563 2.8e-15 85.5 133 41.4
Cpa.g.sc172.1 Carica papaya HOM05D000004 ORTHO05D000563 3.7e-15 85.1 120 41.7
Cpa.g.sc72.51 Carica papaya HOM05D006162 ORTHO05D000563 3.7e-15 85.1 123 43.9
Cpa.g.sc105.4 Carica papaya HOM05D000004 ORTHO05D011645 6.3e-15 84.3 58 70.7
Cpa.g.sc127.13 Carica papaya HOM05D000004 ORTHO05D000563 1.4e-14 83.2 54 70.4
Cpa.g.sc33.141 Carica papaya HOM05D000004 ORTHO05D000563 1.8e-14 82.8 161 34.8
Cpa.g.sc67.55 Carica papaya HOM05D000004 ORTHO05D000563 4.1e-14 81.6 91 47.3
Cpa.g.sc28.86 Carica papaya HOM05D000004 ORTHO05D000563 5.3e-14 81.3 51 74.5
Cpa.g.sc23.40 Carica papaya HOM05D000004 ORTHO05D000563 7.0e-14 80.9 97 46.4
TAR452G0001 Trochodendron aralioides HOM05D000004 ORTHO05D000563 7.0e-14 80.9 174 32.8
THA.LOC104804716 Tarenaya hassleriana HOM05D003682 ORTHO05D000002 9.1e-14 80.5 155 35.5
Cpa.g.sc2945.1 Carica papaya HOM05D000004 ORTHO05D000563 2.0e-13 79.3 109 44.0
Cpa.g.sc1356.1 Carica papaya HOM05D000004 ORTHO05D000563 2.7e-13 79.0 91 46.2
Cpa.g.sc68.22 Carica papaya HOM05D000004 ORTHO05D000563 3.5e-13 78.6 71 54.9
Cpa.g.sc531.2 Carica papaya HOM05D000004 ORTHO05D011645 1.0e-12 77.0 74 55.4
Cpa.g.sc23.29 Carica papaya HOM05D000004 ORTHO05D011645 1.7e-12 76.3 58 67.2
Cpa.g.sc78.90 Carica papaya HOM05D000004 ORTHO05D011645 1.7e-12 76.3 57 66.7
Cpa.g.sc100.1 Carica papaya HOM05D000004 ORTHO05D011645 2.2e-12 75.9 53 66.0
PGR083G2791 Punica granatum HOM05D000004 ORTHO05D000563 2.9e-12 75.5 144 32.6
THA.LOC109116955 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 2.9e-12 75.5 162 34.6
THA.LOC104822532 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 3.8e-12 75.1 172 29.7
Cpa.g.sc174.2 Carica papaya HOM05D000004 ORTHO05D000563 5.0e-12 74.7 126 37.3
THA.LOC109117128 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.1e-11 73.6 162 34.0
PGR083G1943 Punica granatum HOM05D000004 ORTHO05D000002 1.9e-11 72.8 174 31.6
PGR029G0001 Punica granatum HOM05D000004 ORTHO05D000002 2.5e-11 72.4 174 31.6
PGR029G0003 Punica granatum HOM05D000004 ORTHO05D000002 2.5e-11 72.4 174 31.6
PGR029G0004 Punica granatum HOM05D000004 ORTHO05D000002 2.5e-11 72.4 174 31.6
PGR029G0005 Punica granatum HOM05D000004 ORTHO05D000002 2.5e-11 72.4 174 31.6
PGR085G0001 Punica granatum HOM05D000004 ORTHO05D000002 2.5e-11 72.4 174 31.6
PGR085G0002 Punica granatum HOM05D000004 ORTHO05D000002 2.5e-11 72.4 174 31.6
PGR085G0004 Punica granatum HOM05D000004 ORTHO05D000002 2.5e-11 72.4 174 31.6
PGR085G0006 Punica granatum HOM05D000004 ORTHO05D000002 2.5e-11 72.4 174 31.6
THA.LOC104806048 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 2.5e-11 72.4 109 38.5
Cpa.g.sc75.77 Carica papaya HOM05D000004 ORTHO05D000563 3.2e-11 72.0 138 39.9
PGR031G1605 Punica granatum HOM05D000004 ORTHO05D000002 3.2e-11 72.0 174 31.6
Cpa.g.sc143.13 Carica papaya HOM05D000004 ORTHO05D000563 5.5e-11 71.2 159 31.4
PGR027G0001 Punica granatum HOM05D000004 ORTHO05D000002 5.5e-11 71.2 174 31.0
PGR042G1478 Punica granatum HOM05D000004 ORTHO05D000002 5.5e-11 71.2 174 31.0
PGR085G0003 Punica granatum HOM05D000004 ORTHO05D000002 5.5e-11 71.2 174 31.0
PGR085G0005 Punica granatum HOM05D000004 ORTHO05D000002 5.5e-11 71.2 174 31.0
PGR142G0162 Punica granatum HOM05D000004 ORTHO05D000002 7.2e-11 70.9 174 31.0
QL11p008013 Quercus lobata HOM05D000004 ORTHO05D000563 7.2e-11 70.9 140 37.9
THA.LOC104799780 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 7.2e-11 70.9 172 29.1
THA.LOC104821896 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 7.2e-11 70.9 172 29.1
Cpa.g.sc101.2 Carica papaya HOM05D000004 ORTHO05D011645 9.4e-11 70.5 54 61.1
Cpa.g.sc121.16 Carica papaya HOM05D000004 ORTHO05D011645 9.4e-11 70.5 57 61.4
Cpa.g.sc159.1 Carica papaya HOM05D000004 ORTHO05D000002 9.4e-11 70.5 150 34.0
Cpa.g.sc100.16 Carica papaya HOM05D000004 ORTHO05D011645 1.2e-10 70.1 42 76.2
PGR031G0364 Punica granatum HOM05D000004 ORTHO05D000002 1.2e-10 70.1 180 29.4
Cpa.g.sc54.19 Carica papaya HOM05D000004 ORTHO05D000563 1.6e-10 69.7 106 40.6
Cpa.g.sc78.67 Carica papaya HOM05D000004 ORTHO05D011645 1.6e-10 69.7 72 47.2
PGR004G2150 Punica granatum HOM05D000004 ORTHO05D000002 1.6e-10 69.7 75 45.3
PGR031G3196 Punica granatum HOM05D000004 ORTHO05D000002 2.1e-10 69.3 171 31.0
Cpa.g.sc484.2 Carica papaya HOM05D000004 ORTHO05D011645 2.7e-10 68.9 75 45.3
PGR083G2735 Punica granatum HOM05D000004 ORTHO05D000002 2.7e-10 68.9 174 30.5
Cpa.g.sc100.20 Carica papaya HOM05D000004 ORTHO05D011645 8.0e-10 67.4 90 42.2
Cpa.g.sc124.44 Carica papaya HOM05D000004 ORTHO05D011645 8.0e-10 67.4 58 60.3
PGR119G1621 Punica granatum HOM05D000004 ORTHO05D000563 8.0e-10 67.4 75 42.7
Cpa.g.sc2219.1 Carica papaya HOM05D000004 ORTHO05D000563 1.0e-09 67.0 176 29.5
Cpa.g.sc32.166 Carica papaya HOM05D000004 ORTHO05D000563 1.4e-09 66.6 157 29.3
Cpa.g.sc69.22 Carica papaya HOM05D000004 ORTHO05D011645 1.8e-09 66.2 68 45.6
PGR102G0770 Punica granatum HOM05D000004 ORTHO05D000002 1.8e-09 66.2 75 44.0
THA.LOC104798746 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.8e-09 66.2 110 36.4
Cpa.g.sc32.165 Carica papaya HOM05D000004 ORTHO05D000563 2.3e-09 65.9 168 28.6
PGR052G0001 Punica granatum HOM05D000004 ORTHO05D000002 2.3e-09 65.9 179 27.9
Cpa.g.sc120.58 Carica papaya HOM05D000004 ORTHO05D000563 4.0e-09 65.1 134 33.6
Cpa.g.sc41.34 Carica papaya HOM05D000004 ORTHO05D000563 4.0e-09 65.1 112 36.6
Cpa.g.sc22.44 Carica papaya HOM05D000004 ORTHO05D000002 5.2e-09 64.7 168 30.4
Cpa.g.sc24.72 Carica papaya HOM05D000004 ORTHO05D011645 5.2e-09 64.7 67 49.3
PGR044G0113 Punica granatum HOM05D000004 ORTHO05D000563 5.2e-09 64.7 179 27.4
PGR044G1656 Punica granatum HOM05D000004 ORTHO05D000563 5.2e-09 64.7 179 27.4
Cpa.g.sc220.6 Carica papaya HOM05D000004 ORTHO05D000563 8.8e-09 63.9 73 45.2
Cpa.g.sc45.31 Carica papaya HOM05D000004 ORTHO05D000563 8.8e-09 63.9 101 43.6
Cpa.g.sc15.39 Carica papaya HOM05D000004 ORTHO05D000563 1.2e-08 63.5 66 51.5
Cpa.g.sc645.1 Carica papaya HOM05D000004 ORTHO05D000563 1.2e-08 63.5 166 31.3
PGR115G0001 Punica granatum HOM05D000004 ORTHO05D000002 1.2e-08 63.5 179 27.4
SHI46426 Sapria himalayana HOM05D000004 ORTHO05D000563 1.2e-08 63.5 156 31.4
Cpa.g.sc17.151 Carica papaya HOM05D000004 ORTHO05D000002 1.5e-08 63.2 163 30.1
PGR004G2489 Punica granatum HOM05D000004 ORTHO05D000002 2.6e-08 62.4 75 41.3
PGR031G2848 Punica granatum HOM05D000004 ORTHO05D000002 3.4e-08 62.0 179 27.4
Cpa.g.sc31.112 Carica papaya HOM05D000004 ORTHO05D000563 4.4e-08 61.6 93 43.0
Cpa.g.sc73.45 Carica papaya HOM05D000004 ORTHO05D000563 4.4e-08 61.6 54 53.7
PGR083G1623 Punica granatum HOM05D000004 ORTHO05D000002 4.4e-08 61.6 179 26.3
Cpa.g.sc120.30 Carica papaya HOM05D000004 ORTHO05D011645 5.7e-08 61.2 70 45.7
Cpa.g.sc24.4 Carica papaya HOM05D000004 ORTHO05D000563 5.7e-08 61.2 125 32.8
Cpa.g.sc44.39 Carica papaya HOM05D000004 ORTHO05D000563 5.7e-08 61.2 81 42.0
PGR044G0528 Punica granatum HOM05D000004 ORTHO05D000002 5.7e-08 61.2 75 41.3
Cpa.g.sc4640.1 Carica papaya HOM05D000004 ORTHO05D000563 7.5e-08 60.8 58 50.0
Cpa.g.sc98.3 Carica papaya HOM05D000004 ORTHO05D000563 7.5e-08 60.8 126 35.7
PGR102G2704 Punica granatum HOM05D000004 ORTHO05D000002 7.5e-08 60.8 179 26.8
Cpa.g.sc61.2 Carica papaya HOM05D000004 ORTHO05D000563 9.8e-08 60.5 176 27.3
Cpa.g.sc38.14 Carica papaya HOM05D000004 ORTHO05D000563 1.3e-07 60.1 172 28.5
Cpa.g.sc61.48 Carica papaya HOM05D000004 ORTHO05D000563 1.7e-07 59.7 150 32.7
Cpa.g.sc212.6 Carica papaya HOM05D000004 ORTHO05D011645 2.2e-07 59.3 49 57.1
Cpa.g.sc225.3 Carica papaya HOM05D000004 ORTHO05D000563 2.2e-07 59.3 176 28.4
Cpa.g.sc93.12 Carica papaya HOM05D000004 ORTHO05D000563 2.2e-07 59.3 94 35.1
Cpa.g.sc1925.2 Carica papaya HOM05D000004 ORTHO05D000563 2.8e-07 58.9 110 34.5
Cpa.g.sc138.37 Carica papaya HOM05D000004 ORTHO05D000563 3.7e-07 58.5 176 27.3
Cpa.g.sc57.14 Carica papaya HOM05D000004 ORTHO05D000563 3.7e-07 58.5 146 30.8
Cpa.g.sc3092.1 Carica papaya HOM05D000004 ORTHO05D000563 4.8e-07 58.2 177 28.2
Cpa.g.sc49.152 Carica papaya HOM05D000004 ORTHO05D000563 4.8e-07 58.2 132 33.3
PGR042G0073 Punica granatum HOM05D000004 ORTHO05D000002 4.8e-07 58.2 179 25.7
PGR142G1811 Punica granatum HOM05D000004 ORTHO05D000002 4.8e-07 58.2 179 26.3
SHI54914 Sapria himalayana HOM05D000004 ORTHO05D009927 6.3e-07 57.8 74 35.1
Cpa.g.sc0.34 Carica papaya HOM05D000004 ORTHO05D000563 8.3e-07 57.4 118 33.9
Cpa.g.sc949.1 Carica papaya HOM05D000004 ORTHO05D000563 8.3e-07 57.4 62 46.8
Cpa.g.sc219.4 Carica papaya HOM05D000004 ORTHO05D000563 1.4e-06 56.6 149 30.2
Cpa.g.sc22.77 Carica papaya HOM05D000004 ORTHO05D000563 1.8e-06 56.2 137 31.4
THA.LOC104818554 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.8e-06 56.2 176 24.4
Cpa.g.sc0.189 Carica papaya HOM05D000004 ORTHO05D000563 2.4e-06 55.8 179 27.4
Cpa.g.sc17.221 Carica papaya HOM05D000004 ORTHO05D000563 2.4e-06 55.8 111 36.0
Cpa.g.sc2.22 Carica papaya HOM05D000004 ORTHO05D000563 2.4e-06 55.8 142 32.4
THA.LOC104807122 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.4e-06 55.8 109 33.9
MSTRG.20360 Avicennia marina HOM05D000004 ORTHO05D000002 4.1e-06 55.1 174 28.7
SHI01386 Sapria himalayana HOM05D000004 ORTHO05D000002 4.1e-06 55.1 67 41.8
SHI47489 Sapria himalayana HOM05D000004 ORTHO05D000002 4.1e-06 55.1 74 33.8
SHI47910 Sapria himalayana HOM05D000004 ORTHO05D000002 4.1e-06 55.1 76 32.9
SHI48187 Sapria himalayana HOM05D000004 ORTHO05D000002 4.1e-06 55.1 76 32.9
Cpa.g.sc300.3 Carica papaya HOM05D000004 ORTHO05D000563 5.4e-06 54.7 143 30.8
Cpa.g.sc32.157 Carica papaya HOM05D000004 ORTHO05D000563 5.4e-06 54.7 83 38.6
Cpa.g.sc4.120 Carica papaya HOM05D000004 ORTHO05D000563 5.4e-06 54.7 54 50.0
SHI39813 Sapria himalayana HOM05D000004 ORTHO05D000563 5.4e-06 54.7 110 28.2
Cpa.g.sc0.165 Carica papaya HOM05D000004 ORTHO05D000563 7.0e-06 54.3 102 39.2
Cpa.g.sc96.45 Carica papaya HOM05D000004 ORTHO05D000002 7.0e-06 54.3 81 43.2
PGR004G1708 Punica granatum HOM05D000004 ORTHO05D000563 7.0e-06 54.3 142 30.3
THA.LOC109116513 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 7.0e-06 54.3 144 34.0
SHI35598 Sapria himalayana HOM05D000004 ORTHO05D000563 9.1e-06 53.9 98 37.8
SHI40193 Sapria himalayana HOM05D000004 ORTHO05D000002 9.1e-06 53.9 74 35.1


User provided reference genes

Program Settings