Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc32.155 Carica papaya HOM05D003169 ORTHO05D003700 1.8e-90 335.9 165 100.0
TWI38G0104 Tripterygium wilfordii HOM05D003169 ORTHO05D003700 4.9e-64 248.1 132 89.4
TWI38G0597 Tripterygium wilfordii HOM05D003169 ORTHO05D003700 4.9e-64 248.1 132 89.4
Cfa017765 Carpinus fangiana HOM05D003169 ORTHO05D003700 1.6e-62 243.0 125 92.0
Haze_18485 Corylus avellana HOM05D003169 ORTHO05D003700 1.6e-62 243.0 130 89.2
Potri.010G174900 Populus trichocarpa HOM05D003169 ORTHO05D003700 1.6e-62 243.0 125 92.0
MSTRG.7098 Avicennia marina HOM05D003169 ORTHO05D003700 1.0e-61 240.4 125 90.4
Potri.008G081200 Populus trichocarpa HOM05D003169 ORTHO05D003700 3.0e-61 238.8 125 89.6
Oeu025996.1 Olea europaea HOM05D003169 ORTHO05D003700 3.9e-61 238.4 128 88.3
QL04p095761 Quercus lobata HOM05D003169 ORTHO05D003700 5.0e-61 238.0 124 91.1
MBI18_g42879_MAGBIO Magnolia biondii HOM05D003169 ORTHO05D003700 6.6e-61 237.7 125 88.8
Peaxi162Scf00670g00216 Petunia axillaris HOM05D003169 ORTHO05D003700 8.6e-61 237.3 149 78.5
Rhsim06G0244800 Rhododendron simsii HOM05D003169 ORTHO05D003700 8.6e-61 237.3 126 88.9
A07p44430 Brassica napus HOM05D003169 ORTHO05D003700 1.1e-60 236.9 148 76.4
BraA07t31952Z Brassica rapa HOM05D003169 ORTHO05D003700 1.1e-60 236.9 148 76.4
Gohir.A13G126700 Gossypium hirsutum HOM05D003169 ORTHO05D003700 1.1e-60 236.9 125 88.8
Oeu005061.1 Olea europaea HOM05D003169 ORTHO05D003700 1.9e-60 236.1 139 82.0
THA.LOC104812392 Tarenaya hassleriana HOM05D003169 ORTHO05D003700 1.9e-60 236.1 125 89.6
Dinv42454 Davidia involucrata HOM05D003169 ORTHO05D003700 2.5e-60 235.7 125 90.4
Aa31LG4G1680 Aethionema arabicum HOM05D003169 ORTHO05D003700 3.3e-60 235.3 125 88.0
Cc00_g09110 Coffea canephora HOM05D003169 ORTHO05D003700 3.3e-60 235.3 125 88.8
ClCG02G018810 Citrullus lanatus HOM05D003169 ORTHO05D003700 4.3e-60 235.0 125 88.0
Duzib213G0284 Durio zibethinus HOM05D003169 ORTHO05D003700 4.3e-60 235.0 125 88.8
Hma1.2p1_0754F.1_g213010 Hydrangea macrophylla HOM05D003169 ORTHO05D003700 4.3e-60 235.0 125 91.2
RcHm_v2.0_Chr5g0023151 Rosa chinensis HOM05D003169 ORTHO05D003700 4.3e-60 235.0 135 83.0
Sabra10G0134700 Salix brachista HOM05D003169 ORTHO05D003700 4.3e-60 235.0 125 88.8
GSVIVG01036703001 Vitis vinifera HOM05D003169 ORTHO05D003700 4.3e-60 235.0 130 86.9
AT1G79350 Arabidopsis thaliana HOM05D003169 ORTHO05D003700 5.6e-60 234.6 123 89.4
Phvul.011G180100 Phaseolus vulgaris HOM05D003169 ORTHO05D003700 5.6e-60 234.6 132 83.3
Gohir.D13G130400 Gossypium hirsutum HOM05D003169 ORTHO05D003700 7.3e-60 234.2 125 87.2
Gorai.013G146500 Gossypium raimondii HOM05D003169 ORTHO05D003700 7.3e-60 234.2 125 87.2
Oeu029454.1 Olea europaea HOM05D003169 ORTHO05D003700 7.3e-60 234.2 125 88.8
VMungo1127G0472 Vigna mungo HOM05D003169 ORTHO05D003700 7.3e-60 234.2 125 87.2
Atru.chr1.22 Acer truncatum HOM05D003169 ORTHO05D003700 9.5e-60 233.8 125 89.6
BcaB02g08679 Brassica carinata HOM05D003169 ORTHO05D003700 9.5e-60 233.8 123 88.6
C06p53240 Brassica napus HOM05D003169 ORTHO05D003700 9.5e-60 233.8 123 88.6
BolC6t40342H Brassica oleracea HOM05D003169 ORTHO05D003700 9.5e-60 233.8 123 88.6
MELO3C019615.2 Cucumis melo HOM05D003169 ORTHO05D003700 9.5e-60 233.8 124 87.9
Sc06g0001640 Simmondsia chinensis HOM05D003169 ORTHO05D003700 9.5e-60 233.8 125 88.8
Solyc10g005490.4 Solanum lycopersicum HOM05D003169 ORTHO05D003700 9.5e-60 233.8 125 88.8
Sopen10g001470 Solanum pennellii HOM05D003169 ORTHO05D003700 9.5e-60 233.8 125 88.8
CiPaw.15G112000 Carya illinoinensis HOM05D003169 ORTHO05D003700 1.2e-59 233.4 124 88.7
Thhalv10018021m.g Eutrema salsugineum HOM05D003169 ORTHO05D003700 1.2e-59 233.4 123 88.6
Oeu005060.1 Olea europaea HOM05D003169 ORTHO05D003700 1.2e-59 233.4 123 88.6
Sp5g34410 Schrenkiella parvula HOM05D003169 ORTHO05D003700 1.2e-59 233.4 123 88.6
Glyma.15G219200 Glycine max HOM05D003169 ORTHO05D003700 1.6e-59 233.0 140 80.0
Thecc.07G189500 Theobroma cacao HOM05D003169 ORTHO05D003700 2.8e-59 232.3 125 88.0
TAR627G0022 Trochodendron aralioides HOM05D003169 ORTHO05D003700 2.8e-59 232.3 125 87.2
Carub.0002s2621 Capsella rubella HOM05D003169 ORTHO05D003700 3.6e-59 231.9 123 88.6
CARHR073010 Cardamine hirsuta HOM05D003169 ORTHO05D003700 3.6e-59 231.9 123 87.8
FvH4_3g13920 Fragaria vesca HOM05D003169 ORTHO05D003700 3.6e-59 231.9 125 86.4
FAN11G1789 Fragaria x ananassa HOM05D003169 ORTHO05D003700 3.6e-59 231.9 125 86.4
FAN16G1231 Fragaria x ananassa HOM05D003169 ORTHO05D003700 3.6e-59 231.9 125 86.4
FAN21G1262 Fragaria x ananassa HOM05D003169 ORTHO05D003700 3.6e-59 231.9 125 86.4
PGR031G0700 Punica granatum HOM05D003169 ORTHO05D003700 3.6e-59 231.9 133 82.7
CANSAT56G1976 Cannabis sativa HOM05D003169 ORTHO05D003700 4.7e-59 231.5 123 87.8
Nn7g38410 Nelumbo nucifera HOM05D003169 ORTHO05D003700 4.7e-59 231.5 125 86.4
vmacro22494 Vaccinium macrocarpon HOM05D003169 ORTHO05D003700 4.7e-59 231.5 125 88.0
CSS0011288 Camellia sinensis var. sinensis HOM05D003169 ORTHO05D003700 6.2e-59 231.1 125 88.8
Lj2A8G63 Lonicera japonica HOM05D003169 ORTHO05D003700 6.2e-59 231.1 125 88.0
Lalb_Chr19g0133151 Lupinus albus HOM05D003169 ORTHO05D003700 6.2e-59 231.1 125 87.2
CAN.G492.81 Capsicum annuum HOM05D003169 ORTHO05D003700 8.0e-59 230.7 125 88.0
Medtr8g447090 Medicago truncatula HOM05D003169 ORTHO05D003700 8.0e-59 230.7 132 81.1
arahy.Tifrunner.gnm1.ann1.0T77JN Arachis hypogaea HOM05D003169 ORTHO05D003700 1.0e-58 230.3 125 84.0
arahy.Tifrunner.gnm1.ann1.4D9FZH Arachis hypogaea HOM05D003169 ORTHO05D003700 1.0e-58 230.3 125 84.0
Migut.M01496 Erythranthe guttata HOM05D003169 ORTHO05D003700 1.0e-58 230.3 125 86.4
Eucgr.F04478 Eucalyptus grandis HOM05D003169 ORTHO05D003700 1.0e-58 230.3 125 85.6
FAN25G3213 Fragaria x ananassa HOM05D003169 ORTHO05D003700 1.0e-58 230.3 125 85.6
BcaC08g47495 Brassica carinata HOM05D003169 ORTHO05D003700 1.4e-58 229.9 123 87.8
CsaV3_6G013370 Cucumis sativus L. HOM05D003169 ORTHO05D003700 1.4e-58 229.9 125 85.6
Ca_22977_v3 Cicer arietinum L. HOM05D003169 ORTHO05D003700 2.3e-58 229.2 132 81.1
Ciclev10004277m.g Citrus clementina HOM05D003169 ORTHO05D003700 3.1e-58 228.8 125 88.0
ECA240G3251 Erigeron canadensis HOM05D003169 ORTHO05D003700 3.1e-58 228.8 125 85.6
MD05G1239900 Malus domestica HOM05D003169 ORTHO05D003700 4.0e-58 228.4 125 84.8
HanXRQChr13g0408921 Helianthus annuus HOM05D003169 ORTHO05D003700 5.2e-58 228.0 125 85.6
HanXRQChr13g0408941 Helianthus annuus HOM05D003169 ORTHO05D003700 5.2e-58 228.0 125 85.6
MD10G1218000 Malus domestica HOM05D003169 ORTHO05D003700 6.8e-58 227.6 125 84.8
Psat4g185200 Pisum sativum HOM05D003169 ORTHO05D003700 6.8e-58 227.6 125 84.8
SGA_v2.0_scaffold186G40168 Striga asiatica HOM05D003169 ORTHO05D003700 8.9e-58 227.3 125 84.8
Glyma.08G233702 Glycine max HOM05D003169 ORTHO05D003700 2.0e-57 226.1 125 85.6
AUR62041054 Chenopodium quinoa HOM05D003169 ORTHO05D003700 4.4e-57 224.9 135 80.7
Nitab4.5_0003291g0050 Nicotiana tabacum HOM05D003169 ORTHO05D003700 4.4e-57 224.9 125 88.0
Nitab4.5_0007774g0010 Nicotiana tabacum HOM05D003169 ORTHO05D003700 4.4e-57 224.9 125 88.0
Peaxi162Scf00420g00518 Petunia axillaris HOM05D003169 ORTHO05D003700 4.4e-57 224.9 122 88.5
HanXRQChr03g0077801 Helianthus annuus HOM05D003169 ORTHO05D003700 9.8e-57 223.8 125 86.4
Lsat_1_v5_gn_7_69060 Lactuca sativa HOM05D003169 ORTHO05D003700 9.8e-57 223.8 125 86.4
Aqoxy1G01380 Aquilegia oxysepala HOM05D003169 ORTHO05D003700 2.2e-56 222.6 125 83.2
DCAR_016853 Daucus carota HOM05D003169 ORTHO05D003700 3.7e-56 221.9 125 83.2
Prupe.4G126100 Prunus persica HOM05D003169 ORTHO05D003700 3.7e-56 221.9 125 84.8
Rhsim02G0183500 Rhododendron simsii HOM05D003169 ORTHO05D003700 3.7e-56 221.9 125 84.8
Manes.16G048930 Manihot esculenta HOM05D003169 ORTHO05D003700 4.9e-56 221.5 125 84.8
Ca_03187_v3 Cicer arietinum L. HOM05D003169 ORTHO05D003700 6.4e-56 221.1 121 84.3
Lj3g0024633 Lotus japonicus HOM05D003169 ORTHO05D003700 6.4e-56 221.1 125 82.4
Psat0s11g0040 Pisum sativum HOM05D003169 ORTHO05D003700 6.4e-56 221.1 121 84.3
PSO675G7315 Papaver somniferum HOM05D003169 ORTHO05D003700 1.1e-55 220.3 125 81.6
HPP92_005947 Vanilla planifolia HOM05D003169 ORTHO05D003700 1.1e-55 220.3 125 82.4
Zm00001eb430630 Zea mays HOM05D003169 ORTHO05D003700 7.0e-55 217.6 125 81.6
EL10Ac2g03244 Beta vulgaris HOM05D003169 ORTHO05D003700 9.2e-55 217.2 132 77.3
PSO541G6458 Papaver somniferum HOM05D003169 ORTHO05D003700 1.2e-54 216.9 125 80.8
Sed0006985 Sechium edule HOM05D003169 ORTHO05D003700 1.2e-54 216.9 125 82.4
TPR.G30141 Trifolium pratense HOM05D003169 ORTHO05D003700 1.2e-54 216.9 138 76.1
unitig_32.g11074 Utricularia gibba HOM05D003169 ORTHO05D003700 1.6e-54 216.5 125 82.4
arahy.Tifrunner.gnm1.ann1.THX68V Arachis hypogaea HOM05D003169 ORTHO05D003700 2.0e-54 216.1 125 80.0
AUR62043014 Chenopodium quinoa HOM05D003169 ORTHO05D003700 4.6e-54 214.9 162 69.1
Medtr2g063813 Medicago truncatula HOM05D003169 ORTHO05D003700 4.6e-54 214.9 121 81.8
Medtr6g091960 Medicago truncatula HOM05D003169 ORTHO05D003700 4.6e-54 214.9 121 81.8
DCAR_013706 Daucus carota HOM05D003169 ORTHO05D003700 6.0e-54 214.5 125 81.6
Lalb_Chr20g0108381 Lupinus albus HOM05D003169 ORTHO05D003700 6.0e-54 214.5 125 80.8
TAR629G1197 Trochodendron aralioides HOM05D003169 ORTHO05D003700 1.0e-53 213.8 125 84.8
arahy.Tifrunner.gnm1.ann1.JSN7JY Arachis hypogaea HOM05D003169 ORTHO05D003700 1.7e-53 213.0 125 79.2
Medtr2g063620 Medicago truncatula HOM05D003169 ORTHO05D003700 2.3e-53 212.6 121 82.6
Medtr6g091930 Medicago truncatula HOM05D003169 ORTHO05D003700 2.3e-53 212.6 121 82.6
TPR.G3619 Trifolium pratense HOM05D003169 ORTHO05D003700 8.6e-53 210.7 121 80.2
Lj3g0007581 Lotus japonicus HOM05D003169 ORTHO05D003700 7.3e-52 207.6 125 76.8
Mapoly0153s0011 Marchantia polymorpha HOM05D003169 ORTHO05D003700 7.3e-52 207.6 125 77.6
DCAR_013705 Daucus carota HOM05D003169 ORTHO05D003700 1.2e-51 206.8 121 80.2
Zm00001eb413950 Zea mays HOM05D003169 ORTHO05D003700 1.6e-51 206.5 125 76.8
ATR0794G028 Amborella trichopoda HOM05D003169 ORTHO05D003700 2.1e-51 206.1 125 76.0
MD07G1097900 Malus domestica HOM05D003169 ORTHO05D003700 2.8e-51 205.7 125 78.4
Pp3c3_5410 Physcomitrium patens HOM05D003169 ORTHO05D003700 1.8e-50 203.0 125 75.2
TPR.G3613 Trifolium pratense HOM05D003169 ORTHO05D003700 8.9e-50 200.7 124 75.8
TPR.G3624 Trifolium pratense HOM05D003169 ORTHO05D003700 1.5e-49 199.9 121 76.9
AagrBONN_evm.TU.Sc2ySwM_228.2486 Anthoceros agrestis HOM05D003169 ORTHO05D003700 9.2e-47 190.7 125 73.6
CBR_g11926 Chara braunii HOM05D003169 ORTHO05D000002 1.6e-46 189.9 125 71.2
Ah.16g106160 Amaranthus hybridus HOM05D003169 ORTHO05D003700 1.4e-42 176.8 125 70.4
Os08g0223700 Oryza sativa ssp. japonica HOM05D003169 ORTHO05D003700 8.9e-42 174.1 101 80.2
CSS0003080 Camellia sinensis var. sinensis HOM05D003169 ORTHO05D003700 3.9e-29 132.1 68 89.7
Haze_26591 Corylus avellana HOM05D003169 ORTHO05D003700 3.3e-28 129.0 117 53.8
Cre02.g095045 Chlamydomonas reinhardtii HOM05D003169 ORTHO05D003700 1.2e-25 120.6 116 54.3
SGA_v2.0_scaffold4G01863 Striga asiatica HOM05D003169 ORTHO05D003700 9.9e-25 117.5 91 67.0
Cre01.g053250 Chlamydomonas reinhardtii HOM05D003169 ORTHO05D003700 1.1e-23 114.0 118 50.0
Actinidia26204 Actinidia chinensis HOM05D003169 ORTHO05D003700 1.8e-21 106.7 125 49.6
TPR.G373 Trifolium pratense HOM05D003169 ORTHO05D003700 5.6e-20 101.7 99 51.5
MCO16G570 Micromonas commoda HOM05D003169 ORTHO05D003700 9.6e-20 100.9 106 50.0
MCO01G648 Micromonas commoda HOM05D003169 ORTHO05D003700 3.6e-19 99.0 110 45.5
Cre13.g578501 Chlamydomonas reinhardtii HOM05D003169 ORTHO05D003700 4.0e-18 95.5 97 49.5
Actinidia33342 Actinidia chinensis HOM05D003169 ORTHO05D003700 2.0e-17 93.2 59 81.4
PRCOL_00005992 Prasinoderma coloniale HOM05D003169 ORTHO05D003700 2.4e-15 86.3 119 43.7
Cre07.g350100 Chlamydomonas reinhardtii HOM05D003169 ORTHO05D003700 7.1e-15 84.7 92 46.7
Potri.002G262101 Populus trichocarpa HOM05D003169 ORTHO05D003700 3.1e-10 69.3 42 76.2
Cre02.g095052 Chlamydomonas reinhardtii HOM05D003169 ORTHO05D003700 5.8e-09 65.1 63 52.4


User provided reference genes

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