Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc30.8 Carica papaya HOM05D002270 ORTHO05D002866 5.0e-99 364.4 177 100.0
Duzib235G1111 Durio zibethinus HOM05D002270 ORTHO05D002866 1.4e-32 143.7 154 50.6
Carub.0002s1105 Capsella rubella HOM05D002270 ORTHO05D002866 2.4e-32 142.9 125 58.4
CARHR059570 Cardamine hirsuta HOM05D002270 ORTHO05D002866 3.1e-32 142.5 125 59.2
Atru.chr1.3816 Acer truncatum HOM05D002270 ORTHO05D002866 2.6e-31 139.4 125 60.8
AL2G25500 Arabidopsis lyrata HOM05D002270 ORTHO05D002866 7.6e-31 137.9 125 56.0
QL05p009063 Quercus lobata HOM05D002270 ORTHO05D002866 7.6e-31 137.9 125 60.8
Rhsim08G0236800 Rhododendron simsii HOM05D002270 ORTHO05D002866 1.7e-30 136.7 124 58.9
Potri.017G039100 Populus trichocarpa HOM05D002270 ORTHO05D002866 4.9e-30 135.2 125 56.8
Atru.chr1.3813 Acer truncatum HOM05D002270 ORTHO05D002866 6.4e-30 134.8 126 60.3
Sabra17G0026200 Salix brachista HOM05D002270 ORTHO05D002866 1.1e-29 134.0 125 56.0
A02p14000 Brassica napus HOM05D002270 ORTHO05D002866 1.4e-29 133.7 125 53.6
Ciclev10024676m.g Citrus clementina HOM05D002270 ORTHO05D002866 1.9e-29 133.3 125 60.8
AT1G67120 Arabidopsis thaliana HOM05D002270 ORTHO05D002866 2.4e-29 132.9 125 56.0
CSS0023775 Camellia sinensis var. sinensis HOM05D002270 ORTHO05D002866 2.4e-29 132.9 131 51.9
BcaC05g27863 Brassica carinata HOM05D002270 ORTHO05D002866 3.2e-29 132.5 121 55.4
CiPaw.01G221300 Carya illinoinensis HOM05D002270 ORTHO05D002866 5.4e-29 131.7 168 47.6
Thhalv10017991m.g Eutrema salsugineum HOM05D002270 ORTHO05D002866 5.4e-29 131.7 125 52.8
Thecc.06G117100 Theobroma cacao HOM05D002270 ORTHO05D002866 1.2e-28 130.6 124 56.5
GSVIVG01016794001 Vitis vinifera HOM05D002270 ORTHO05D002866 1.2e-28 130.6 125 56.0
THA.LOC104807245 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 2.7e-28 129.4 124 53.2
Haze_16005 Corylus avellana HOM05D002270 ORTHO05D002866 4.6e-28 128.6 125 56.0
Sp5g22050 Schrenkiella parvula HOM05D002270 ORTHO05D002866 4.6e-28 128.6 125 52.8
C02p22490 Brassica napus HOM05D002270 ORTHO05D002866 6.0e-28 128.3 125 49.6
Cfa003549 Carpinus fangiana HOM05D002270 ORTHO05D002866 6.0e-28 128.3 125 56.0
COL.COLO4_30723 Corchorus olitorius HOM05D002270 ORTHO05D002866 6.0e-28 128.3 124 58.1
VMungo0464G0518 Vigna mungo HOM05D002270 ORTHO05D002866 7.9e-28 127.9 135 49.6
Carub.0002s1342 Capsella rubella HOM05D002270 ORTHO05D002866 1.0e-27 127.5 125 52.8
arahy.Tifrunner.gnm1.ann1.B3D1QM Arachis hypogaea HOM05D002270 ORTHO05D002866 1.3e-27 127.1 135 48.9
Medtr8g018890 Medicago truncatula HOM05D002270 ORTHO05D002866 1.3e-27 127.1 138 48.6
BraA02t06460Z Brassica rapa HOM05D002270 ORTHO05D002866 1.8e-27 126.7 132 50.8
TWI09G1355 Tripterygium wilfordii HOM05D002270 ORTHO05D002866 1.8e-27 126.7 155 47.1
Manes.04G142500 Manihot esculenta HOM05D002270 ORTHO05D002866 5.1e-27 125.2 125 54.4
Oeu039944.3 Olea europaea HOM05D002270 ORTHO05D002866 5.1e-27 125.2 124 53.2
TPR.G9775 Trifolium pratense HOM05D002270 ORTHO05D002866 5.1e-27 125.2 137 48.9
Aa31LG2G3520 Aethionema arabicum HOM05D002270 ORTHO05D002866 8.7e-27 124.4 147 48.3
Aqoxy7G03985 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 1.1e-26 124.0 125 55.2
arahy.Tifrunner.gnm1.ann1.3D1K9T Arachis hypogaea HOM05D002270 ORTHO05D002866 1.5e-26 123.6 127 51.2
vmacro22217 Vaccinium macrocarpon HOM05D002270 ORTHO05D002866 1.5e-26 123.6 122 54.1
Actinidia32171 Actinidia chinensis HOM05D002270 ORTHO05D002866 1.9e-26 123.2 131 49.6
Dinv37885 Davidia involucrata HOM05D002270 ORTHO05D002866 1.9e-26 123.2 125 54.4
Lj5C40G12 Lonicera japonica HOM05D002270 ORTHO05D002866 2.5e-26 122.9 128 53.9
Phvul.010G134100 Phaseolus vulgaris HOM05D002270 ORTHO05D002866 2.5e-26 122.9 135 47.4
Ca_23356_v3 Cicer arietinum L. HOM05D002270 ORTHO05D002866 4.3e-26 122.1 138 47.1
Psat4g180280 Pisum sativum HOM05D002270 ORTHO05D002866 4.3e-26 122.1 137 46.0
Gohir.A10G056600 Gossypium hirsutum HOM05D002270 ORTHO05D002866 5.6e-26 121.7 124 55.6
BolC2t08403H Brassica oleracea HOM05D002270 ORTHO05D002866 9.6e-26 120.9 132 47.0
Glyma.07G035600 Glycine max HOM05D002270 ORTHO05D002866 9.6e-26 120.9 135 48.9
Gohir.D10G058500 Gossypium hirsutum HOM05D002270 ORTHO05D002866 9.6e-26 120.9 124 55.6
Lj3g0006373 Lotus japonicus HOM05D002270 ORTHO05D002866 9.6e-26 120.9 135 46.7
Gorai.011G062600 Gossypium raimondii HOM05D002270 ORTHO05D002866 1.3e-25 120.6 124 55.6
THA.LOC104805560 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 1.3e-25 120.6 126 50.0
SHI16816 Sapria himalayana HOM05D002270 ORTHO05D002866 1.6e-25 120.2 148 43.9
Glyma.16G004800 Glycine max HOM05D002270 ORTHO05D002866 2.1e-25 119.8 134 47.8
Lsat_1_v5_gn_4_95020 Lactuca sativa HOM05D002270 ORTHO05D002866 2.1e-25 119.8 153 45.8
QL01p054541 Quercus lobata HOM05D002270 ORTHO05D002866 2.8e-25 119.4 118 55.1
Rhsim07G0217300 Rhododendron simsii HOM05D002270 ORTHO05D002866 2.8e-25 119.4 132 48.5
Eucgr.J02836 Eucalyptus grandis HOM05D002270 ORTHO05D002866 6.2e-25 118.2 128 50.0
Lalb_Chr20g0113911 Lupinus albus HOM05D002270 ORTHO05D002866 1.4e-24 117.1 136 47.8
PGR142G3590 Punica granatum HOM05D002270 ORTHO05D002866 1.4e-24 117.1 128 50.0
QL93p0356_0058 Quercus lobata HOM05D002270 ORTHO05D002866 1.8e-24 116.7 117 53.8
Nn8g38745 Nelumbo nucifera HOM05D002270 ORTHO05D002866 2.4e-24 116.3 125 51.2
Lsat_1_v5_gn_7_1960 Lactuca sativa HOM05D002270 ORTHO05D002866 5.3e-24 115.2 147 45.6
TAR636G1145 Trochodendron aralioides HOM05D002270 ORTHO05D002866 5.3e-24 115.2 126 52.4
Sc15g0000370 Simmondsia chinensis HOM05D002270 ORTHO05D002866 9.0e-24 114.4 124 48.4
DCAR_014031 Daucus carota HOM05D002270 ORTHO05D002866 2.6e-23 112.8 127 48.0
PSO144G0138 Papaver somniferum HOM05D002270 ORTHO05D002866 3.4e-23 112.5 125 52.0
Prupe.3G044200 Prunus persica HOM05D002270 ORTHO05D002866 5.8e-23 111.7 130 49.2
Migut.H01763 Erythranthe guttata HOM05D002270 ORTHO05D002866 1.0e-22 110.9 127 46.5
MD05G1009600 Malus domestica HOM05D002270 ORTHO05D002866 3.8e-22 109.0 130 48.5
PSO423G0075 Papaver somniferum HOM05D002270 ORTHO05D002866 3.8e-22 109.0 125 51.2
Nitab4.5_0000433g0200 Nicotiana tabacum HOM05D002270 ORTHO05D002866 4.9e-22 108.6 126 46.0
FAN02G3927 Fragaria x ananassa HOM05D002270 ORTHO05D002866 8.4e-22 107.8 128 49.2
ClCG09G000860 Citrullus lanatus HOM05D002270 ORTHO05D002866 7.1e-21 104.8 126 46.8
Cc04_g01520 Coffea canephora HOM05D002270 ORTHO05D002866 1.6e-20 103.6 136 43.4
Solyc04g072260.3 Solanum lycopersicum HOM05D002270 ORTHO05D002866 1.6e-20 103.6 126 45.2
MSTRG.10966 Avicennia marina HOM05D002270 ORTHO05D002866 2.1e-20 103.2 125 45.6
EL10Ac7g16387 Beta vulgaris HOM05D002270 ORTHO05D002866 2.1e-20 103.2 122 46.7
MELO3C024369.2 Cucumis melo HOM05D002270 ORTHO05D002866 2.1e-20 103.2 124 45.2
Sopen04g028450 Solanum pennellii HOM05D002270 ORTHO05D002866 2.7e-20 102.8 126 44.4
RcHm_v2.0_Chr2g0144641 Rosa chinensis HOM05D002270 ORTHO05D002866 3.5e-20 102.4 144 44.4
CAN.G1010.9 Capsicum annuum HOM05D002270 ORTHO05D002866 4.6e-20 102.1 126 47.6
CsaV3_7G034610 Cucumis sativus L. HOM05D002270 ORTHO05D002866 7.9e-20 101.3 124 44.4
HanXRQChr09g0276661 Helianthus annuus HOM05D002270 ORTHO05D002866 1.0e-19 100.9 145 42.8
SalBow6G4013 Salvia bowleyana HOM05D002270 ORTHO05D002866 1.0e-19 100.9 125 45.6
SGA_v2.0_scaffold71G23844 Striga asiatica HOM05D002270 ORTHO05D002866 1.0e-19 100.9 127 44.1
ATR0736G011 Amborella trichopoda HOM05D002270 ORTHO05D002866 1.8e-19 100.1 129 41.9
CANSAT56G0650 Cannabis sativa HOM05D002270 ORTHO05D002866 3.9e-19 99.0 132 48.5
ECA232G3855 Erigeron canadensis HOM05D002270 ORTHO05D002866 6.7e-19 98.2 153 41.2
AUR62001507 Chenopodium quinoa HOM05D002270 ORTHO05D002866 1.5e-18 97.1 125 44.8
FvH4_6g34300 Fragaria vesca HOM05D002270 ORTHO05D002866 1.9e-18 96.7 140 42.9
Nitab4.5_0003025g0020 Nicotiana tabacum HOM05D002270 ORTHO05D002866 2.5e-18 96.3 90 54.4
Peaxi162Scf00226g00823 Petunia axillaris HOM05D002270 ORTHO05D002866 4.3e-18 95.5 136 42.6
Sed0013702 Sechium edule HOM05D002270 ORTHO05D002866 9.6e-18 94.4 156 39.7
Hund05750 Selenicereus undatus HOM05D002270 ORTHO05D002866 1.3e-17 94.0 124 45.2
FAN05G0510 Fragaria x ananassa HOM05D002270 ORTHO05D002866 4.8e-17 92.0 144 40.3
CDE12G0087 Ceratophyllum demersum HOM05D002270 ORTHO05D002866 2.6e-15 86.3 126 43.7
Lsat_1_v5_gn_9_82220 Lactuca sativa HOM05D002270 ORTHO05D002866 3.4e-15 85.9 151 39.1
Ah.08g216550 Amaranthus hybridus HOM05D002270 ORTHO05D002866 3.8e-14 82.4 85 50.6
HPP92_008118 Vanilla planifolia HOM05D002270 ORTHO05D002866 8.4e-14 81.3 125 40.8
AUR62009863 Chenopodium quinoa HOM05D002270 ORTHO05D002866 1.1e-13 80.9 88 47.7
AagrBONN_evm.TU.Sc2ySwM_344.4174 Anthoceros agrestis HOM05D002270 ORTHO05D002866 3.9e-11 72.4 142 35.2
C05p38590 Brassica napus HOM05D002270 ORTHO05D002866 1.9e-10 70.1 49 65.3
FAN14G4121 Fragaria x ananassa HOM05D002270 ORTHO05D002866 3.3e-10 69.3 120 37.5
unitig_22.g5235 Utricularia gibba HOM05D002270 ORTHO05D002866 6.3e-09 65.1 88 40.9
Zm00001eb290580 Zea mays HOM05D002270 ORTHO05D002866 8.2e-09 64.7 124 36.3
Pp3c8_22130 Physcomitrium patens HOM05D002270 ORTHO05D002866 1.8e-08 63.5 114 29.8
Mapoly0033s0024 Marchantia polymorpha HOM05D002270 ORTHO05D002866 1.2e-07 60.8 146 28.1
CBR_g741 Chara braunii HOM05D002270 ORTHO05D002866 3.4e-07 59.3 91 36.3
COL.COLO4_12568 Corchorus olitorius HOM05D002270 ORTHO05D002866 2.2e-06 56.6 81 43.2


User provided reference genes

Program Settings