Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc30.11 Carica papaya HOM05D002270 ORTHO05D002866 6.7e-204 713.8 353 100.0
Dinv37885 Davidia involucrata HOM05D002270 ORTHO05D002866 1.1e-118 430.6 304 68.8
TWI09G1355 Tripterygium wilfordii HOM05D002270 ORTHO05D002866 9.6e-118 427.6 285 72.6
CiPaw.01G221300 Carya illinoinensis HOM05D002270 ORTHO05D002866 3.6e-117 425.6 285 70.9
Manes.04G142500 Manihot esculenta HOM05D002270 ORTHO05D002866 3.6e-117 425.6 310 67.7
COL.COLO4_30723 Corchorus olitorius HOM05D002270 ORTHO05D002866 8.1e-117 424.5 282 72.3
CSS0023775 Camellia sinensis var. sinensis HOM05D002270 ORTHO05D002866 1.4e-116 423.7 286 71.7
Haze_16005 Corylus avellana HOM05D002270 ORTHO05D002866 1.8e-116 423.3 285 69.1
Potri.017G039100 Populus trichocarpa HOM05D002270 ORTHO05D002866 4.0e-116 422.2 291 70.4
COL.COLO4_12568 Corchorus olitorius HOM05D002270 ORTHO05D002866 6.9e-116 421.4 282 72.0
Nn8g38745 Nelumbo nucifera HOM05D002270 ORTHO05D002866 6.9e-116 421.4 285 70.9
Actinidia32171 Actinidia chinensis HOM05D002270 ORTHO05D002866 5.8e-115 418.3 320 65.0
TAR636G1163 Trochodendron aralioides HOM05D002270 ORTHO05D002866 9.9e-115 417.5 326 62.9
Gorai.011G062600 Gossypium raimondii HOM05D002270 ORTHO05D002866 3.8e-114 415.6 282 72.3
Gohir.A10G056600 Gossypium hirsutum HOM05D002270 ORTHO05D002866 6.4e-114 414.8 282 71.6
Sc15g0000370 Simmondsia chinensis HOM05D002270 ORTHO05D002866 8.4e-114 414.5 285 68.4
Thecc.06G117100 Theobroma cacao HOM05D002270 ORTHO05D002866 8.4e-114 414.5 282 71.6
Lj5C40G12 Lonicera japonica HOM05D002270 ORTHO05D002866 1.4e-113 413.7 289 68.5
Sabra17G0026200 Salix brachista HOM05D002270 ORTHO05D002866 1.9e-113 413.3 291 68.4
Rhsim08G0236800 Rhododendron simsii HOM05D002270 ORTHO05D002866 3.2e-113 412.5 314 64.6
Gohir.D10G058500 Gossypium hirsutum HOM05D002270 ORTHO05D002866 9.3e-113 411.0 282 71.6
THA.LOC104807245 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 1.6e-112 410.2 344 59.9
Cfa003549 Carpinus fangiana HOM05D002270 ORTHO05D002866 2.1e-112 409.8 285 67.4
Eucgr.J02836 Eucalyptus grandis HOM05D002270 ORTHO05D002866 6.0e-112 408.3 290 66.6
Duzib235G1111 Durio zibethinus HOM05D002270 ORTHO05D002866 1.0e-111 407.5 282 70.2
QL05p009063 Quercus lobata HOM05D002270 ORTHO05D002866 3.9e-111 405.6 285 67.7
THA.LOC104805560 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 8.7e-111 404.4 317 63.7
CAN.G1010.9 Capsicum annuum HOM05D002270 ORTHO05D002866 1.1e-110 404.1 304 65.5
Atru.chr1.3816 Acer truncatum HOM05D002270 ORTHO05D002866 2.5e-110 402.9 290 68.6
Migut.H01763 Erythranthe guttata HOM05D002270 ORTHO05D002866 4.3e-110 402.1 286 66.8
Lsat_1_v5_gn_4_95020 Lactuca sativa HOM05D002270 ORTHO05D002866 4.8e-109 398.7 285 66.7
Peaxi162Scf00226g00823 Petunia axillaris HOM05D002270 ORTHO05D002866 1.1e-108 397.5 302 63.6
HanXRQChr09g0276661 Helianthus annuus HOM05D002270 ORTHO05D002866 2.4e-108 396.4 329 59.6
Oeu039944.3 Olea europaea HOM05D002270 ORTHO05D002866 2.4e-108 396.4 286 67.5
PGR142G3590 Punica granatum HOM05D002270 ORTHO05D002866 2.4e-108 396.4 315 61.6
MSTRG.10966 Avicennia marina HOM05D002270 ORTHO05D002866 6.9e-108 394.8 286 66.1
Oeu047969.1 Olea europaea HOM05D002270 ORTHO05D002866 9.0e-108 394.4 304 62.8
DCAR_014031 Daucus carota HOM05D002270 ORTHO05D002866 3.4e-107 392.5 286 66.8
Sopen04g028450 Solanum pennellii HOM05D002270 ORTHO05D002866 3.4e-107 392.5 287 66.6
Zm00001eb290580 Zea mays HOM05D002270 ORTHO05D002866 3.4e-107 392.5 285 63.5
Nitab4.5_0003025g0020 Nicotiana tabacum HOM05D002270 ORTHO05D002866 4.5e-107 392.1 322 61.2
Hund05751 Selenicereus undatus HOM05D002270 ORTHO05D002866 4.5e-107 392.1 296 63.9
Solyc04g072260.3 Solanum lycopersicum HOM05D002270 ORTHO05D002866 5.8e-107 391.7 287 66.2
Aqoxy7G03985 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 4.9e-106 388.7 288 64.9
Cc04_g01520 Coffea canephora HOM05D002270 ORTHO05D002866 4.9e-106 388.7 286 65.7
C02p22490 Brassica napus HOM05D002270 ORTHO05D002866 6.4e-106 388.3 289 62.6
BolC2t08403H Brassica oleracea HOM05D002270 ORTHO05D002866 4.2e-105 385.6 289 62.3
SalBow6G4013 Salvia bowleyana HOM05D002270 ORTHO05D002866 7.1e-105 384.8 286 64.3
Prupe.3G044200 Prunus persica HOM05D002270 ORTHO05D002866 1.2e-104 384.0 284 64.8
Thhalv10017991m.g Eutrema salsugineum HOM05D002270 ORTHO05D002866 1.6e-104 383.6 311 59.2
MD05G1009600 Malus domestica HOM05D002270 ORTHO05D002866 2.1e-104 383.3 284 65.1
Aa31LG2G3520 Aethionema arabicum HOM05D002270 ORTHO05D002866 3.5e-104 382.5 348 55.5
EL10Ac7g16387 Beta vulgaris HOM05D002270 ORTHO05D002866 4.6e-104 382.1 290 64.8
Lj3g0006373 Lotus japonicus HOM05D002270 ORTHO05D002866 2.3e-103 379.8 292 64.4
Atru.chr1.3813 Acer truncatum HOM05D002270 ORTHO05D002866 3.0e-103 379.4 268 69.8
CANSAT56G0650 Cannabis sativa HOM05D002270 ORTHO05D002866 3.9e-103 379.0 334 57.8
A02p14000 Brassica napus HOM05D002270 ORTHO05D002866 5.1e-103 378.6 289 61.9
SHI16813 Sapria himalayana HOM05D002270 ORTHO05D002866 5.1e-103 378.6 282 65.2
BraA02t06460Z Brassica rapa HOM05D002270 ORTHO05D002866 8.7e-103 377.9 289 61.9
AT1G67120 Arabidopsis thaliana HOM05D002270 ORTHO05D002866 3.3e-102 375.9 289 61.6
AL2G25500 Arabidopsis lyrata HOM05D002270 ORTHO05D002866 7.4e-102 374.8 289 60.9
AUR62001507 Chenopodium quinoa HOM05D002270 ORTHO05D002866 7.4e-102 374.8 285 66.0
Glyma.07G035600 Glycine max HOM05D002270 ORTHO05D002866 6.2e-101 371.7 276 65.6
CARHR059570 Cardamine hirsuta HOM05D002270 ORTHO05D002866 1.1e-100 370.9 287 60.6
ECA232G4141 Erigeron canadensis HOM05D002270 ORTHO05D002866 1.4e-100 370.5 300 61.0
Glyma.16G004800 Glycine max HOM05D002270 ORTHO05D002866 5.3e-100 368.6 270 66.3
HPP92_008118 Vanilla planifolia HOM05D002270 ORTHO05D002866 5.3e-100 368.6 285 62.8
GSVIVG01016794001 Vitis vinifera HOM05D002270 ORTHO05D002866 1.2e-99 367.5 303 62.4
Carub.0002s1342 Capsella rubella HOM05D002270 ORTHO05D002866 1.5e-99 367.1 289 58.8
unitig_22.g5235 Utricularia gibba HOM05D002270 ORTHO05D002866 1.5e-99 367.1 284 63.0
Carub.0002s1105 Capsella rubella HOM05D002270 ORTHO05D002866 2.6e-99 366.3 289 60.9
Rhsim07G0217300 Rhododendron simsii HOM05D002270 ORTHO05D002866 4.5e-99 365.5 386 51.0
FvH4_6g34300 Fragaria vesca HOM05D002270 ORTHO05D002866 1.3e-98 364.0 291 60.8
FAN14G4121 Fragaria x ananassa HOM05D002270 ORTHO05D002866 1.3e-98 364.0 291 60.8
RcHm_v2.0_Chr2g0144641 Rosa chinensis HOM05D002270 ORTHO05D002866 1.7e-98 363.6 322 57.5
FAN02G3927 Fragaria x ananassa HOM05D002270 ORTHO05D002866 2.2e-98 363.2 291 60.8
Ciclev10024676m.g Citrus clementina HOM05D002270 ORTHO05D002866 3.8e-98 362.5 269 68.4
Phvul.010G134100 Phaseolus vulgaris HOM05D002270 ORTHO05D002866 4.9e-98 362.1 294 62.9
VMungo0464G0518 Vigna mungo HOM05D002270 ORTHO05D002866 5.5e-97 358.6 294 63.6
Ca_23356_v3 Cicer arietinum L. HOM05D002270 ORTHO05D002866 2.7e-96 356.3 299 60.9
FAN05G0510 Fragaria x ananassa HOM05D002270 ORTHO05D002866 3.5e-96 355.9 298 60.1
Medtr8g018890 Medicago truncatula HOM05D002270 ORTHO05D002866 4.6e-96 355.5 298 59.1
Psat4g180280 Pisum sativum HOM05D002270 ORTHO05D002866 4.6e-96 355.5 291 62.2
PSO144G0138 Papaver somniferum HOM05D002270 ORTHO05D002866 1.0e-95 354.4 292 61.0
PSO423G0075 Papaver somniferum HOM05D002270 ORTHO05D002866 3.0e-95 352.8 292 61.3
CsaV3_7G034610 Cucumis sativus L. HOM05D002270 ORTHO05D002866 1.1e-94 350.9 291 61.2
TPR.G9777 Trifolium pratense HOM05D002270 ORTHO05D002866 1.1e-94 350.9 293 59.4
MELO3C024369.2 Cucumis melo HOM05D002270 ORTHO05D002866 1.9e-94 350.1 288 61.5
ClCG09G000860 Citrullus lanatus HOM05D002270 ORTHO05D002866 1.6e-93 347.1 288 60.8
AUR62009863 Chenopodium quinoa HOM05D002270 ORTHO05D002866 8.2e-93 344.7 322 55.9
SEGI_27232 Sequoiadendron giganteum HOM05D002270 ORTHO05D000001 6.9e-92 341.7 300 54.3
Lalb_Chr20g0113901 Lupinus albus HOM05D002270 ORTHO05D002866 1.5e-91 340.5 268 64.6
Sed0013702 Sechium edule HOM05D002270 ORTHO05D002866 1.3e-90 337.4 288 58.7
SGA_v2.0_scaffold71G23844 Striga asiatica HOM05D002270 ORTHO05D002866 7.2e-89 331.6 295 56.6
ATR0736G169 Amborella trichopoda HOM05D002270 ORTHO05D002866 7.9e-88 328.2 270 60.4
Mapoly0033s0024 Marchantia polymorpha HOM05D002270 ORTHO05D002866 8.5e-82 308.1 301 51.2
Pp3c8_22130 Physcomitrium patens HOM05D002270 ORTHO05D002866 6.1e-80 302.0 292 54.1
AagrBONN_evm.TU.Sc2ySwM_344.4174 Anthoceros agrestis HOM05D002270 ORTHO05D002866 5.7e-78 295.4 328 48.8
VMungo1383G2297 Vigna mungo HOM05D002270 ORTHO05D002866 1.7e-77 293.9 263 60.8
Ah.08g216540 Amaranthus hybridus HOM05D002270 ORTHO05D002866 2.2e-77 293.5 274 56.2
TPR.G29953 Trifolium pratense HOM05D002270 ORTHO05D002866 1.4e-76 290.8 259 56.8
arahy.Tifrunner.gnm1.ann1.B3D1QM Arachis hypogaea HOM05D002270 ORTHO05D002866 4.1e-76 289.3 294 52.0
arahy.Tifrunner.gnm1.ann1.VXKY2I Arachis hypogaea HOM05D002270 ORTHO05D002866 4.1e-76 289.3 294 52.0
Nitab4.5_0000433g0200 Nicotiana tabacum HOM05D002270 ORTHO05D002866 5.0e-74 282.3 220 63.2
SEGI_24765 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 1.3e-58 231.1 223 50.2
MCO14G508 Micromonas commoda HOM05D002270 ORTHO05D002866 1.7e-58 230.7 285 43.9
PRCOL_00003697 Prasinoderma coloniale HOM05D002270 ORTHO05D002866 3.8e-58 229.6 307 42.0
Cre03.g161800 Chlamydomonas reinhardtii HOM05D002270 ORTHO05D002866 9.4e-57 224.9 327 41.3
vmacro22217 Vaccinium macrocarpon HOM05D002270 ORTHO05D002866 1.8e-55 220.7 193 58.0
C02p22530 Brassica napus HOM05D002270 ORTHO05D002866 1.7e-53 214.2 142 71.1
BolC2t08407H Brassica oleracea HOM05D002270 ORTHO05D002866 1.7e-53 214.2 142 71.1
arahy.Tifrunner.gnm1.ann1.3D1K9T Arachis hypogaea HOM05D002270 ORTHO05D002866 1.6e-51 207.6 170 62.4
CBR_g742 Chara braunii HOM05D002270 ORTHO05D002866 1.9e-49 200.7 240 43.3
CDE12G0087 Ceratophyllum demersum HOM05D002270 ORTHO05D002866 8.0e-40 168.7 116 71.6
VMungo0331G1745 Vigna mungo HOM05D000103 ORTHO05D000049 6.0e-27 125.9 295 30.5
Lsat_1_v5_gn_7_1960 Lactuca sativa HOM05D002270 ORTHO05D002866 3.0e-26 123.6 280 32.1
Nitab4.5_0003025g0040 Nicotiana tabacum HOM05D002270 ORTHO05D002866 1.1e-25 121.7 325 31.7
Cpa.g.sc30.12 Carica papaya HOM05D002270 ORTHO05D002866 2.5e-25 120.6 306 30.4
Nitab4.5_0000433g0210 Nicotiana tabacum HOM05D002270 ORTHO05D002866 5.6e-25 119.4 93 61.3
SMO141G0091 Selaginella moellendorffii HOM05D002270 ORTHO05D002866 1.6e-24 117.9 281 32.0
vmacro22218 Vaccinium macrocarpon HOM05D002270 ORTHO05D002866 1.8e-15 87.8 65 63.1
GSVIVG01012486001 Vitis vinifera HOM05D002270 ORTHO05D002866 4.0e-15 86.7 55 72.7
C02p22540 Brassica napus HOM05D002270 ORTHO05D002866 1.5e-14 84.7 289 27.3
BolC2t08408H Brassica oleracea HOM05D002270 ORTHO05D002866 2.0e-14 84.3 265 27.9
CDE12G0416 Ceratophyllum demersum HOM05D002270 ORTHO05D002866 1.7e-13 81.3 135 40.0
Psat0s3488g0080 Pisum sativum HOM05D002270 ORTHO05D030496 4.9e-13 79.7 54 77.8
Psat0s3488g0040 Pisum sativum HOM05D002270 ORTHO05D030496 8.4e-13 79.0 54 77.8
arahy.Tifrunner.gnm1.ann1.I4EX6M Arachis hypogaea HOM05D002270 ORTHO05D002866 4.1e-12 76.6 275 26.9
TPR.G29949 Trifolium pratense HOM05D002270 ORTHO05D002866 3.5e-11 73.6 269 27.1
Sp5g22060 Schrenkiella parvula HOM05D002270 ORTHO05D002866 1.0e-10 72.0 209 30.1
ECA232G3855 Erigeron canadensis HOM05D002270 ORTHO05D002866 2.3e-10 70.9 272 25.4
Lalb_Chr20g0113911 Lupinus albus HOM05D002270 ORTHO05D002866 5.1e-10 69.7 140 35.0
Cpa.g.sc30.10 Carica papaya HOM05D002270 ORTHO05D002866 6.6e-10 69.3 271 25.5
Hund05750 Selenicereus undatus HOM05D002270 ORTHO05D002866 6.6e-10 69.3 274 23.7
arahy.Tifrunner.gnm1.ann1.X0CJR3 Arachis hypogaea HOM05D000682 ORTHO05D000510 2.5e-09 67.4 51 70.6
C02p22550 Brassica napus HOM05D002270 ORTHO05D002866 3.3e-09 67.0 90 42.2
TAR636G1846 Trochodendron aralioides HOM05D002270 ORTHO05D002866 3.6e-08 63.5 103 35.9
VMungo0331G1298 Vigna mungo HOM05D002270 ORTHO05D002866 3.6e-08 63.5 105 37.1
ATR0736G011 Amborella trichopoda HOM05D002270 ORTHO05D002866 1.4e-07 61.6 105 36.2
SHI16816 Sapria himalayana HOM05D002270 ORTHO05D002866 1.8e-07 61.2 282 24.1
Cre02.g095250 Chlamydomonas reinhardtii HOM05D002270 ORTHO05D002866 4.0e-07 60.1 129 31.8
AagrBONN_evm.TU.Sc2ySwM_117.1507 Anthoceros agrestis HOM05D002270 ORTHO05D002866 5.2e-07 59.7 62 46.8
Cre02.g095550 Chlamydomonas reinhardtii HOM05D053512 ORTHO05D012763 5.2e-07 59.7 129 31.8
SEGI_12162 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 1.2e-06 58.5 165 27.3
Psat3g019920 Pisum sativum HOM05D002270 ORTHO05D002866 1.5e-06 58.2 89 40.4


User provided reference genes

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