Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc3.267 Carica papaya HOM05D004403 ORTHO05D006164 2.3e-257 891.7 444 100.0
Thecc.03G162000 Theobroma cacao HOM05D004403 ORTHO05D006164 1.3e-188 663.3 406 80.5
COL.COLO4_14184 Corchorus olitorius HOM05D004403 ORTHO05D006164 3.2e-187 658.7 406 81.5
Prupe.2G282700 Prunus persica HOM05D004403 ORTHO05D006164 9.1e-182 640.6 408 78.2
MD01G1186100 Malus domestica HOM05D004403 ORTHO05D006164 2.6e-181 639.0 408 77.5
TAR375G1017 Trochodendron aralioides HOM05D004403 ORTHO05D006164 1.7e-180 636.3 406 78.3
Gohir.D09G045100 Gossypium hirsutum HOM05D004403 ORTHO05D006164 5.0e-180 634.8 406 77.1
Gorai.006G065300 Gossypium raimondii HOM05D004403 ORTHO05D006164 8.5e-180 634.0 406 77.1
Haze_13825 Corylus avellana HOM05D004403 ORTHO05D006164 1.9e-179 632.9 408 79.4
Gohir.A09G043600 Gossypium hirsutum HOM05D004403 ORTHO05D006164 2.5e-179 632.5 406 77.1
Cfa008231 Carpinus fangiana HOM05D004403 ORTHO05D006164 7.2e-179 630.9 408 79.2
CiPaw.04G063300 Carya illinoinensis HOM05D004403 ORTHO05D006164 1.2e-178 630.2 406 78.1
CSS0005074 Camellia sinensis var. sinensis HOM05D004403 ORTHO05D006164 2.3e-177 625.9 407 77.4
RcHm_v2.0_Chr1g0375181 Rosa chinensis HOM05D004403 ORTHO05D006164 1.5e-176 623.2 409 75.3
FvH4_7g28210 Fragaria vesca HOM05D004403 ORTHO05D006164 2.0e-176 622.9 408 75.7
FAN06G1852 Fragaria x ananassa HOM05D004403 ORTHO05D006164 2.0e-176 622.9 408 75.7
Ciclev10004147m.g Citrus clementina HOM05D004403 ORTHO05D006164 3.3e-176 622.1 405 76.3
TWI39G0431 Tripterygium wilfordii HOM05D004403 ORTHO05D006164 3.3e-176 622.1 406 77.1
FAN06G4744 Fragaria x ananassa HOM05D004403 ORTHO05D006164 1.3e-175 620.2 408 75.2
Actinidia25041 Actinidia chinensis HOM05D004403 ORTHO05D006164 1.7e-175 619.8 409 76.0
FAN03G0558 Fragaria x ananassa HOM05D004403 ORTHO05D006164 2.2e-175 619.4 408 75.5
FAN03G1790 Fragaria x ananassa HOM05D004403 ORTHO05D006164 2.2e-175 619.4 408 75.5
MELO3C008722.2 Cucumis melo HOM05D004403 ORTHO05D006164 1.8e-174 616.3 406 75.4
FAN01G1597 Fragaria x ananassa HOM05D004403 ORTHO05D006164 1.8e-174 616.3 408 75.0
GSVIVG01018506001 Vitis vinifera HOM05D004403 ORTHO05D006164 2.4e-174 615.9 406 76.4
FAN10G1553 Fragaria x ananassa HOM05D004403 ORTHO05D006164 3.1e-174 615.5 405 76.3
CsaV3_2G009710 Cucumis sativus L. HOM05D004403 ORTHO05D006164 4.1e-174 615.1 406 75.1
PGR142G2186 Punica granatum HOM05D004403 ORTHO05D006164 4.1e-174 615.1 407 74.4
Eucgr.K00143 Eucalyptus grandis HOM05D004403 ORTHO05D006164 1.5e-173 613.2 407 74.9
arahy.Tifrunner.gnm1.ann1.ZK7SIQ Arachis hypogaea HOM05D004403 ORTHO05D006164 3.8e-172 608.6 411 73.7
arahy.Tifrunner.gnm1.ann1.R8RU34 Arachis hypogaea HOM05D004403 ORTHO05D006164 6.5e-172 607.8 411 73.7
Rhsim03G0172000 Rhododendron simsii HOM05D004403 ORTHO05D006164 3.2e-171 605.5 396 74.2
Lalb_Chr03g0033081 Lupinus albus HOM05D004403 ORTHO05D006164 1.6e-170 603.2 407 72.5
Ca_26390_v3 Cicer arietinum L. HOM05D004403 ORTHO05D006164 2.1e-170 602.8 404 74.8
Sed0016961 Sechium edule HOM05D004403 ORTHO05D006164 1.4e-169 600.1 406 73.6
Hma1.2p1_0099F.1_g048870 Hydrangea macrophylla HOM05D004403 ORTHO05D006164 1.8e-169 599.7 407 73.2
Glyma.16G203900 Glycine max HOM05D004403 ORTHO05D006164 8.8e-169 597.4 406 73.4
Lj2g0001335 Lotus japonicus HOM05D004403 ORTHO05D006164 2.0e-168 596.3 404 74.0
THA.LOC104825074 Tarenaya hassleriana HOM05D004403 ORTHO05D006164 2.6e-168 595.9 409 72.9
Psat1g115120 Pisum sativum HOM05D004403 ORTHO05D006164 9.7e-168 594.0 402 74.4
Hund11791 Selenicereus undatus HOM05D004403 ORTHO05D006164 1.7e-167 593.2 402 72.4
Medtr6g461810 Medicago truncatula HOM05D004403 ORTHO05D006164 2.2e-167 592.8 403 73.7
vmacro06764 Vaccinium macrocarpon HOM05D004403 ORTHO05D006164 6.3e-167 591.3 423 71.9
Potri.012G022700 Populus trichocarpa HOM05D004403 ORTHO05D006164 8.2e-167 590.9 407 73.7
MBI04_g32240_MAGBIO Magnolia biondii HOM05D004403 ORTHO05D006164 1.4e-166 590.1 406 71.9
Thhalv10012441m.g Eutrema salsugineum HOM05D004403 ORTHO05D006164 7.0e-166 587.8 411 71.5
EL10Ac3g05779 Beta vulgaris HOM05D004403 ORTHO05D006164 1.6e-165 586.6 399 72.2
Sabra12G0011100 Salix brachista HOM05D004403 ORTHO05D006164 1.6e-165 586.6 407 73.5
QL12p039581 Quercus lobata HOM05D004403 ORTHO05D006164 2.0e-165 586.3 467 66.8
AUR62035037 Chenopodium quinoa HOM05D004403 ORTHO05D006164 4.5e-165 585.1 401 72.1
CARHR264420 Cardamine hirsuta HOM05D004403 ORTHO05D006164 1.0e-164 583.9 408 71.1
Glyma.09G153100 Glycine max HOM05D004403 ORTHO05D006164 1.0e-164 583.9 408 71.1
Aqoxy7G00599 Aquilegia oxysepala HOM05D004403 ORTHO05D006164 3.8e-164 582.0 419 70.6
Carub.0008s1166 Capsella rubella HOM05D004403 ORTHO05D006164 1.5e-163 580.1 412 70.9
AT5G51660 Arabidopsis thaliana HOM05D004403 ORTHO05D006164 7.2e-163 577.8 409 70.7
Aa31LG3G8090 Aethionema arabicum HOM05D004403 ORTHO05D006164 1.2e-162 577.0 412 70.9
AL8G25910 Arabidopsis lyrata HOM05D004403 ORTHO05D006164 1.2e-162 577.0 409 71.1
Lj8C36G18 Lonicera japonica HOM05D004403 ORTHO05D006164 1.2e-162 577.0 407 73.0
Ah.07g208350 Amaranthus hybridus HOM05D004403 ORTHO05D006164 2.1e-162 576.2 399 71.9
BcaC03g14584 Brassica carinata HOM05D004403 ORTHO05D006164 8.0e-162 574.3 413 70.0
BolC2t08162H Brassica oleracea HOM05D004403 ORTHO05D006164 8.0e-162 574.3 413 70.0
A02p12180 Brassica napus HOM05D004403 ORTHO05D006164 1.4e-161 573.5 413 70.2
BraA02t06282Z Brassica rapa HOM05D004403 ORTHO05D006164 1.4e-161 573.5 413 70.2
BcaB05g23994 Brassica carinata HOM05D004403 ORTHO05D006164 1.8e-161 573.2 410 70.2
C02p20300 Brassica napus HOM05D004403 ORTHO05D006164 2.3e-161 572.8 413 70.0
Sp6g13860 Schrenkiella parvula HOM05D004403 ORTHO05D006164 7.5e-160 567.8 406 71.2
Sc17g0003760 Simmondsia chinensis HOM05D004403 ORTHO05D006164 7.5e-160 567.8 409 68.9
Cc02_g03860 Coffea canephora HOM05D004403 ORTHO05D006164 6.3e-159 564.7 457 64.6
VMungo0464G1100 Vigna mungo HOM05D004403 ORTHO05D006164 2.7e-157 559.3 472 62.3
CAN.G916.4 Capsicum annuum HOM05D004403 ORTHO05D006164 7.7e-157 557.8 399 70.7
DCAR_016012 Daucus carota HOM05D004403 ORTHO05D006164 9.4e-155 550.8 406 69.2
PSO782G0596 Papaver somniferum HOM05D004403 ORTHO05D006164 1.2e-154 550.4 409 70.2
DCAR_005517 Daucus carota HOM05D004403 ORTHO05D006164 1.6e-154 550.1 406 69.2
Migut.F01168 Erythranthe guttata HOM05D004403 ORTHO05D006164 1.6e-154 550.1 409 68.7
ATR0810G058 Amborella trichopoda HOM05D004403 ORTHO05D006164 4.7e-154 548.5 412 67.0
Duzib205G1350 Durio zibethinus HOM05D004403 ORTHO05D006164 3.0e-153 545.8 406 69.0
HanXRQChr08g0214911 Helianthus annuus HOM05D004403 ORTHO05D006164 2.6e-152 542.7 411 68.4
PSO478G4614 Papaver somniferum HOM05D004403 ORTHO05D006164 4.4e-152 542.0 409 69.2
Oeu021730.2 Olea europaea HOM05D004403 ORTHO05D006164 2.2e-151 539.7 463 62.0
Sopen03g003090 Solanum pennellii HOM05D004403 ORTHO05D006164 3.7e-151 538.9 404 68.1
Lsat_1_v5_gn_8_8061 Lactuca sativa HOM05D004403 ORTHO05D006164 6.3e-151 538.1 413 67.3
SalBow2G1183 Salvia bowleyana HOM05D004403 ORTHO05D006164 3.1e-150 535.8 416 66.8
SGA_v2.0_scaffold303G47887 Striga asiatica HOM05D004403 ORTHO05D006164 4.1e-150 535.4 428 65.0
AUR62016090 Chenopodium quinoa HOM05D004403 ORTHO05D006164 9.1e-150 534.3 401 67.1
ECA233G5768 Erigeron canadensis HOM05D004403 ORTHO05D006164 1.0e-148 530.8 410 66.6
Nn1g01207 Nelumbo nucifera HOM05D004403 ORTHO05D006164 4.2e-147 525.4 391 68.0
TPR.G10680 Trifolium pratense HOM05D004403 ORTHO05D006164 1.8e-137 493.4 412 62.9
Solyc03g007100.3 Solanum lycopersicum HOM05D004403 ORTHO05D006164 2.0e-136 490.0 404 63.6
CDE12G0311 Ceratophyllum demersum HOM05D004403 ORTHO05D006164 2.7e-133 479.6 392 62.8
unitig_0.g469 Utricularia gibba HOM05D004403 ORTHO05D006164 2.5e-131 473.0 409 59.9
Zm00001eb086790 Zea mays HOM05D004403 ORTHO05D006164 2.0e-128 463.4 416 58.2
Nitab4.5_0009404g0010 Nicotiana tabacum HOM05D004403 ORTHO05D006164 5.8e-128 461.8 333 69.7
AagrBONN_evm.TU.Sc2ySwM_228.3689 Anthoceros agrestis HOM05D004403 ORTHO05D006164 3.5e-125 452.6 420 55.0
Pp3c11_8810 Physcomitrium patens HOM05D004403 ORTHO05D006164 4.6e-125 452.2 420 54.3
Mapoly0021s0083 Marchantia polymorpha HOM05D004403 ORTHO05D006164 2.1e-122 443.4 420 54.5
Nitab4.5_0000072g0400 Nicotiana tabacum HOM05D004403 ORTHO05D006164 8.6e-116 421.4 398 58.3
Phvul.004G126600 Phaseolus vulgaris HOM05D004403 ORTHO05D006164 9.6e-115 417.9 241 83.4
Peaxi162Scf00192g01018 Petunia axillaris HOM05D004403 ORTHO05D006164 2.1e-114 416.8 370 59.7
Manes.06G138300 Manihot esculenta HOM05D004403 ORTHO05D006164 8.9e-113 411.4 243 83.1
SMO356G0002 Selaginella moellendorffii HOM05D004403 ORTHO05D006164 7.6e-112 408.3 408 54.4
CBR_g28568 Chara braunii HOM05D004403 ORTHO05D006164 2.0e-104 383.6 450 44.7
MD07G1258300 Malus domestica HOM05D004403 ORTHO05D006164 5.1e-100 369.0 245 75.9
ClCG09G013360 Citrullus lanatus HOM05D004403 ORTHO05D006164 3.6e-98 362.8 254 70.5
HPP92_003516 Vanilla planifolia HOM05D004403 ORTHO05D006164 4.5e-80 302.8 253 60.9
RhsimUnG0154200 Rhododendron simsii HOM05D000504 ORTHO05D000403 1.8e-76 290.8 207 69.6
Dinv02141 Davidia involucrata HOM05D004403 ORTHO05D006164 4.2e-70 269.6 191 71.2
Duzib068G0276 Durio zibethinus HOM05D004403 ORTHO05D006164 3.6e-61 240.0 135 83.0
SHI13862 Sapria himalayana HOM05D004403 ORTHO05D006164 7.9e-61 238.8 208 56.7
PRCOL_00006166 Prasinoderma coloniale HOM05D004403 ORTHO05D006164 1.5e-54 218.0 391 34.8
MCO07G456 Micromonas commoda HOM05D004403 ORTHO05D006164 5.9e-48 196.1 390 35.6
Dinv00168 Davidia involucrata HOM05D004403 ORTHO05D006164 1.7e-47 194.5 157 65.6
Dinv02142 Davidia involucrata HOM05D004403 ORTHO05D006164 3.8e-47 193.4 157 65.0
Dinv02140 Davidia involucrata HOM05D004403 ORTHO05D006164 1.5e-46 191.4 156 64.7
Hma1.2p1_0099F.1_g048890 Hydrangea macrophylla HOM05D004403 ORTHO05D006164 1.0e-44 185.3 159 61.6
Os04g0252200 Oryza sativa ssp. japonica HOM05D004403 ORTHO05D006164 5.7e-43 179.5 121 70.2
Cre13.g573450 Chlamydomonas reinhardtii HOM05D004403 ORTHO05D006164 1.7e-39 167.9 323 36.5
ClCG09G013380 Citrullus lanatus HOM05D004403 ORTHO05D006164 2.5e-38 164.1 104 79.8
Atru.chr1.4080 Acer truncatum HOM05D004403 ORTHO05D019398 2.7e-32 144.1 80 83.8
Dinv28531 Davidia involucrata HOM05D004403 ORTHO05D006164 2.7e-24 117.5 83 74.7
Glyma.17G179000 Glycine max HOM05D004403 ORTHO05D006164 6.4e-18 96.3 52 80.8
HPP92_003526 Vanilla planifolia HOM05D004403 ORTHO05D006164 2.7e-16 90.9 62 74.2
ClCG09G013370 Citrullus lanatus HOM05D004403 ORTHO05D019398 7.8e-16 89.4 42 92.9
TPR.G35938 Trifolium pratense HOM05D004403 ORTHO05D006164 6.6e-15 86.3 55 76.4
SEGI_39896 Sequoiadendron giganteum HOM05D004403 ORTHO05D019398 7.3e-14 82.8 70 61.4
HanXRQChr12g0366371 Helianthus annuus HOM05D004403 ORTHO05D019398 1.1e-12 79.0 47 70.2
Sopen12g017630 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-12 78.2 55 70.9
SEGI_20486 Sequoiadendron giganteum HOM05D004403 ORTHO05D006164 4.4e-11 73.6 47 68.1
CDE04G0245 Ceratophyllum demersum HOM05D002993 ORTHO05D003432 1.3e-10 72.0 55 63.6
SEGI_07215 Sequoiadendron giganteum HOM05D004403 ORTHO05D043538 1.6e-08 65.1 55 60.0
Atru.chr1.628 Acer truncatum HOM05D004403 ORTHO05D006164 3.0e-07 60.8 40 77.5
BolC3t20633H Brassica oleracea HOM05D003609 ORTHO05D004185 3.3e-06 57.4 262 24.8


User provided reference genes

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