Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc3.265 Carica papaya HOM05D004403 ORTHO05D043538 3.6e-36 154.5 81 100.0
MD01G1186100 Malus domestica HOM05D004403 ORTHO05D006164 6.8e-19 97.1 62 82.3
Manes.06G138300 Manihot esculenta HOM05D004403 ORTHO05D006164 1.2e-18 96.3 62 80.6
Thecc.03G162000 Theobroma cacao HOM05D004403 ORTHO05D006164 1.2e-18 96.3 62 80.6
Potri.012G022700 Populus trichocarpa HOM05D004403 ORTHO05D006164 1.5e-18 95.9 62 79.0
Ciclev10004147m.g Citrus clementina HOM05D004403 ORTHO05D006164 2.0e-18 95.5 62 80.6
COL.COLO4_14184 Corchorus olitorius HOM05D004403 ORTHO05D006164 2.0e-18 95.5 62 79.0
QL12p039581 Quercus lobata HOM05D004403 ORTHO05D006164 2.0e-18 95.5 62 82.3
TWI39G0431 Tripterygium wilfordii HOM05D004403 ORTHO05D006164 2.6e-18 95.1 62 79.0
Glyma.09G153100 Glycine max HOM05D004403 ORTHO05D006164 5.8e-18 94.0 62 79.0
Ca_26390_v3 Cicer arietinum L. HOM05D004403 ORTHO05D006164 7.5e-18 93.6 62 75.8
Gohir.D09G045100 Gossypium hirsutum HOM05D004403 ORTHO05D006164 7.5e-18 93.6 62 79.0
Gorai.006G065300 Gossypium raimondii HOM05D004403 ORTHO05D006164 7.5e-18 93.6 62 79.0
FvH4_7g28210 Fragaria vesca HOM05D004403 ORTHO05D006164 9.8e-18 93.2 62 77.4
FAN03G1790 Fragaria x ananassa HOM05D004403 ORTHO05D006164 9.8e-18 93.2 62 77.4
FAN06G1852 Fragaria x ananassa HOM05D004403 ORTHO05D006164 9.8e-18 93.2 62 77.4
FAN06G4744 Fragaria x ananassa HOM05D004403 ORTHO05D006164 9.8e-18 93.2 62 77.4
FAN10G1553 Fragaria x ananassa HOM05D004403 ORTHO05D006164 9.8e-18 93.2 62 77.4
Glyma.16G203900 Glycine max HOM05D004403 ORTHO05D006164 1.3e-17 92.8 62 77.4
Sed0016961 Sechium edule HOM05D004403 ORTHO05D006164 1.3e-17 92.8 62 79.0
RcHm_v2.0_Chr1g0375181 Rosa chinensis HOM05D004403 ORTHO05D006164 1.7e-17 92.4 62 75.8
Sabra12G0011100 Salix brachista HOM05D004403 ORTHO05D006164 1.7e-17 92.4 62 75.8
Eucgr.K00143 Eucalyptus grandis HOM05D004403 ORTHO05D006164 2.2e-17 92.0 62 79.0
Medtr6g461810 Medicago truncatula HOM05D004403 ORTHO05D006164 2.2e-17 92.0 62 74.2
Phvul.004G126600 Phaseolus vulgaris HOM05D004403 ORTHO05D006164 2.2e-17 92.0 62 77.4
Prupe.2G282700 Prunus persica HOM05D004403 ORTHO05D006164 2.2e-17 92.0 62 77.4
Duzib205G1350 Durio zibethinus HOM05D004403 ORTHO05D006164 3.7e-17 91.3 62 77.4
FAN03G0558 Fragaria x ananassa HOM05D004403 ORTHO05D006164 3.7e-17 91.3 62 75.8
Gohir.A09G043600 Gossypium hirsutum HOM05D004403 ORTHO05D006164 3.7e-17 91.3 62 77.4
TPR.G10680 Trifolium pratense HOM05D004403 ORTHO05D006164 3.7e-17 91.3 62 75.8
ClCG09G013380 Citrullus lanatus HOM05D004403 ORTHO05D006164 6.4e-17 90.5 62 77.4
Lj2g0001335 Lotus japonicus HOM05D004403 ORTHO05D006164 6.4e-17 90.5 62 75.8
Psat1g115120 Pisum sativum HOM05D004403 ORTHO05D006164 1.1e-16 89.7 62 74.2
Hund11791 Selenicereus undatus HOM05D004403 ORTHO05D006164 1.1e-16 89.7 62 74.2
CsaV3_2G009710 Cucumis sativus L. HOM05D004403 ORTHO05D006164 1.4e-16 89.4 62 75.8
FAN01G1597 Fragaria x ananassa HOM05D004403 ORTHO05D006164 1.4e-16 89.4 63 76.2
Lalb_Chr03g0033081 Lupinus albus HOM05D004403 ORTHO05D006164 1.9e-16 89.0 62 71.0
CiPaw.04G063300 Carya illinoinensis HOM05D004403 ORTHO05D006164 2.4e-16 88.6 62 74.2
EL10Ac3g05779 Beta vulgaris HOM05D004403 ORTHO05D006164 3.2e-16 88.2 62 74.2
Cfa008231 Carpinus fangiana HOM05D004403 ORTHO05D006164 4.1e-16 87.8 63 77.8
Haze_13825 Corylus avellana HOM05D004403 ORTHO05D006164 4.1e-16 87.8 63 77.8
DCAR_005517 Daucus carota HOM05D004403 ORTHO05D006164 4.1e-16 87.8 62 74.2
DCAR_016012 Daucus carota HOM05D004403 ORTHO05D006164 4.1e-16 87.8 62 74.2
Lj8C36G18 Lonicera japonica HOM05D004403 ORTHO05D006164 4.1e-16 87.8 62 74.2
MELO3C008722.2 Cucumis melo HOM05D004403 ORTHO05D006164 5.4e-16 87.4 62 74.2
Hma1.2p1_0099F.1_g048870 Hydrangea macrophylla HOM05D004403 ORTHO05D006164 5.4e-16 87.4 61 75.4
arahy.Tifrunner.gnm1.ann1.R8RU34 Arachis hypogaea HOM05D004403 ORTHO05D006164 7.0e-16 87.0 63 76.2
arahy.Tifrunner.gnm1.ann1.ZK7SIQ Arachis hypogaea HOM05D004403 ORTHO05D006164 7.0e-16 87.0 63 76.2
AUR62016090 Chenopodium quinoa HOM05D004403 ORTHO05D006164 7.0e-16 87.0 62 71.0
AUR62035037 Chenopodium quinoa HOM05D004403 ORTHO05D006164 7.0e-16 87.0 62 71.0
Migut.F01168 Erythranthe guttata HOM05D004403 ORTHO05D006164 1.2e-15 86.3 62 69.4
TAR375G1017 Trochodendron aralioides HOM05D004403 ORTHO05D006164 1.2e-15 86.3 62 69.4
Aa31LG3G8090 Aethionema arabicum HOM05D004403 ORTHO05D006164 1.6e-15 85.9 62 71.0
CSS0005074 Camellia sinensis var. sinensis HOM05D004403 ORTHO05D006164 3.5e-15 84.7 62 71.0
Nn1g01207 Nelumbo nucifera HOM05D004403 ORTHO05D006164 4.6e-15 84.3 66 71.2
CAN.G916.4 Capsicum annuum HOM05D004403 ORTHO05D006164 6.0e-15 84.0 62 69.4
PGR142G2186 Punica granatum HOM05D004403 ORTHO05D006164 6.0e-15 84.0 62 69.4
AL8G25910 Arabidopsis lyrata HOM05D004403 ORTHO05D006164 1.3e-14 82.8 62 69.4
AT5G51660 Arabidopsis thaliana HOM05D004403 ORTHO05D006164 1.3e-14 82.8 62 69.4
Carub.0008s1166 Capsella rubella HOM05D004403 ORTHO05D006164 1.3e-14 82.8 62 69.4
Sp6g13860 Schrenkiella parvula HOM05D004403 ORTHO05D006164 1.3e-14 82.8 62 69.4
SGA_v2.0_scaffold303G47887 Striga asiatica HOM05D004403 ORTHO05D006164 1.7e-14 82.4 69 62.3
CARHR264420 Cardamine hirsuta HOM05D004403 ORTHO05D006164 2.3e-14 82.0 62 67.7
Oeu021730.2 Olea europaea HOM05D004403 ORTHO05D006164 2.3e-14 82.0 63 63.5
THA.LOC104825074 Tarenaya hassleriana HOM05D004403 ORTHO05D006164 2.3e-14 82.0 66 68.2
Actinidia25041 Actinidia chinensis HOM05D004403 ORTHO05D006164 3.0e-14 81.6 62 69.4
BcaB05g23994 Brassica carinata HOM05D004403 ORTHO05D006164 3.0e-14 81.6 62 67.7
BcaC03g14584 Brassica carinata HOM05D004403 ORTHO05D006164 3.0e-14 81.6 62 67.7
A02p12180 Brassica napus HOM05D004403 ORTHO05D006164 3.0e-14 81.6 62 67.7
C02p20300 Brassica napus HOM05D004403 ORTHO05D006164 3.0e-14 81.6 62 67.7
BolC2t08162H Brassica oleracea HOM05D004403 ORTHO05D006164 3.0e-14 81.6 62 67.7
BraA02t06282Z Brassica rapa HOM05D004403 ORTHO05D006164 3.0e-14 81.6 62 67.7
Sc17g0003760 Simmondsia chinensis HOM05D004403 ORTHO05D006164 3.9e-14 81.3 63 66.7
Solyc03g007100.3 Solanum lycopersicum HOM05D004403 ORTHO05D006164 3.9e-14 81.3 62 66.1
Sopen03g003090 Solanum pennellii HOM05D004403 ORTHO05D006164 3.9e-14 81.3 62 66.1
vmacro06764 Vaccinium macrocarpon HOM05D004403 ORTHO05D006164 3.9e-14 81.3 62 67.7
Ah.07g208350 Amaranthus hybridus HOM05D004403 ORTHO05D006164 6.6e-14 80.5 62 69.4
Thhalv10012441m.g Eutrema salsugineum HOM05D004403 ORTHO05D006164 8.6e-14 80.1 62 66.1
Atru.chr1.628 Acer truncatum HOM05D004403 ORTHO05D006164 1.1e-13 79.7 62 67.7
Aqoxy7G00599 Aquilegia oxysepala HOM05D004403 ORTHO05D006164 1.1e-13 79.7 62 66.1
Rhsim03G0172000 Rhododendron simsii HOM05D004403 ORTHO05D006164 1.1e-13 79.7 57 71.9
unitig_0.g469 Utricularia gibba HOM05D004403 ORTHO05D006164 1.1e-13 79.7 52 76.9
SalBow2G1183 Salvia bowleyana HOM05D004403 ORTHO05D006164 1.9e-13 79.0 62 64.5
GSVIVG01018506001 Vitis vinifera HOM05D004403 ORTHO05D006164 1.9e-13 79.0 61 72.1
HanXRQChr08g0214911 Helianthus annuus HOM05D004403 ORTHO05D006164 2.5e-13 78.6 50 80.0
Peaxi162Scf00192g01018 Petunia axillaris HOM05D004403 ORTHO05D006164 2.5e-13 78.6 59 69.5
Lsat_1_v5_gn_8_8061 Lactuca sativa HOM05D004403 ORTHO05D006164 4.3e-13 77.8 57 70.2
MBI04_g32240_MAGBIO Magnolia biondii HOM05D004403 ORTHO05D006164 9.5e-13 76.6 62 69.4
ECA233G5768 Erigeron canadensis HOM05D004403 ORTHO05D006164 1.6e-12 75.9 51 74.5
Cc02_g03860 Coffea canephora HOM05D004403 ORTHO05D006164 2.1e-12 75.5 58 65.5
ATR0810G058 Amborella trichopoda HOM05D004403 ORTHO05D006164 2.8e-12 75.1 63 65.1
CDE12G0311 Ceratophyllum demersum HOM05D004403 ORTHO05D006164 6.2e-12 73.9 60 71.7
PSO782G0596 Papaver somniferum HOM05D004403 ORTHO05D006164 6.2e-12 73.9 59 67.8
PSO478G4614 Papaver somniferum HOM05D004403 ORTHO05D006164 2.3e-11 72.0 59 66.1
SEGI_07215 Sequoiadendron giganteum HOM05D004403 ORTHO05D043538 2.6e-10 68.6 71 52.1
Zm00001eb086790 Zea mays HOM05D004403 ORTHO05D006164 4.4e-10 67.8 62 61.3
Pp3c11_8810 Physcomitrium patens HOM05D004403 ORTHO05D006164 1.3e-09 66.2 57 63.2
AagrBONN_evm.TU.Sc2ySwM_228.3689 Anthoceros agrestis HOM05D004403 ORTHO05D006164 2.9e-09 65.1 52 61.5
SMO356G0002 Selaginella moellendorffii HOM05D004403 ORTHO05D006164 3.7e-09 64.7 62 54.8
CBR_g28568 Chara braunii HOM05D004403 ORTHO05D006164 1.2e-07 59.7 61 52.5
Mapoly0021s0083 Marchantia polymorpha HOM05D004403 ORTHO05D006164 2.7e-07 58.5 68 45.6


User provided reference genes

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