Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc28.115 Carica papaya HOM05D006355 ORTHO05D008284 3.0e-182 641.7 327 100.0
Thecc.09G082800 Theobroma cacao HOM05D006355 ORTHO05D008284 2.7e-114 416.0 330 67.3
Gohir.D07G013200 Gossypium hirsutum HOM05D006355 ORTHO05D008284 4.7e-111 405.2 332 65.1
Gorai.001G013900 Gossypium raimondii HOM05D006355 ORTHO05D008284 1.8e-110 403.3 332 64.8
QL02p061794 Quercus lobata HOM05D006355 ORTHO05D008284 6.8e-110 401.4 330 65.2
QL02p061767 Quercus lobata HOM05D006355 ORTHO05D008284 2.6e-109 399.4 330 64.8
Gohir.A07G013400 Gossypium hirsutum HOM05D006355 ORTHO05D008284 2.2e-108 396.4 332 63.9
Rhsim05G0014000 Rhododendron simsii HOM05D006355 ORTHO05D008284 4.9e-108 395.2 332 64.5
Haze_25952 Corylus avellana HOM05D006355 ORTHO05D008284 2.4e-107 392.9 325 64.9
Manes.16G098900 Manihot esculenta HOM05D006355 ORTHO05D008284 1.6e-106 390.2 330 64.2
GSVIVG01015151001 Vitis vinifera HOM05D006355 ORTHO05D008284 6.0e-106 388.3 328 64.3
TAR413G0001 Trochodendron aralioides HOM05D006355 ORTHO05D008284 1.1e-104 384.0 329 62.9
Atru.chr7.1648 Acer truncatum HOM05D006355 ORTHO05D008284 1.5e-104 383.6 330 64.8
CiPaw.03G211000 Carya illinoinensis HOM05D006355 ORTHO05D008284 1.5e-104 383.6 331 63.1
Lj4A288G20 Lonicera japonica HOM05D006355 ORTHO05D008284 1.2e-103 380.6 335 63.9
Cfa003044 Carpinus fangiana HOM05D006355 ORTHO05D008284 1.6e-103 380.2 325 64.0
Hma1.2p1_0672F.1_g200900 Hydrangea macrophylla HOM05D006355 ORTHO05D008284 8.9e-102 374.4 329 64.1
Potri.006G146200 Populus trichocarpa HOM05D006355 ORTHO05D008284 8.9e-102 374.4 329 61.7
Eucgr.C00847 Eucalyptus grandis HOM05D006355 ORTHO05D008284 2.0e-101 373.2 332 61.4
Migut.L01533 Erythranthe guttata HOM05D006355 ORTHO05D008284 8.3e-100 367.9 325 60.3
Ciclev10008972m.g Citrus clementina HOM05D006355 ORTHO05D008284 4.1e-99 365.5 325 61.5
TWI34G0237 Tripterygium wilfordii HOM05D006355 ORTHO05D008284 4.6e-98 362.1 325 60.3
Oeu010827.1 Olea europaea HOM05D006355 ORTHO05D008284 7.8e-98 361.3 330 58.5
SalBow1G0189 Salvia bowleyana HOM05D006355 ORTHO05D008284 7.8e-98 361.3 329 59.0
Nitab4.5_0002079g0060 Nicotiana tabacum HOM05D006355 ORTHO05D008284 1.3e-97 360.5 326 60.1
Duzib168G2189 Durio zibethinus HOM05D006355 ORTHO05D008284 1.7e-97 360.1 328 59.8
Glyma.17G052200 Glycine max HOM05D006355 ORTHO05D008284 1.7e-97 360.1 329 62.9
Sed0027351 Sechium edule HOM05D006355 ORTHO05D008284 2.3e-97 359.8 326 62.0
Peaxi162Scf00494g00027 Petunia axillaris HOM05D006355 ORTHO05D008284 3.9e-97 359.0 330 58.8
Prupe.7G204300 Prunus persica HOM05D006355 ORTHO05D008284 5.1e-97 358.6 328 60.7
Glyma.13G107200 Glycine max HOM05D006355 ORTHO05D008284 6.6e-97 358.2 328 61.0
Phvul.003G133900 Phaseolus vulgaris HOM05D006355 ORTHO05D008284 4.3e-96 355.5 329 61.1
CANSAT56G3969 Cannabis sativa HOM05D006355 ORTHO05D008284 5.6e-96 355.1 330 58.2
CANSAT56G1278 Cannabis sativa HOM05D006355 ORTHO05D008284 1.6e-95 353.6 330 57.9
Ca_21303_v3 Cicer arietinum L. HOM05D006355 ORTHO05D008284 1.6e-95 353.6 330 59.4
Solyc07g041020.3 Solanum lycopersicum HOM05D006355 ORTHO05D008284 1.1e-94 350.9 324 57.7
Lj4g0004716 Lotus japonicus HOM05D006355 ORTHO05D008284 1.4e-94 350.5 329 60.8
MELO3C004639.2 Cucumis melo HOM05D006355 ORTHO05D008284 1.8e-94 350.1 326 60.7
vmacro17166 Vaccinium macrocarpon HOM05D006355 ORTHO05D008284 3.1e-94 349.4 329 58.4
ClCG11G001610 Citrullus lanatus HOM05D006355 ORTHO05D008284 2.0e-93 346.7 327 59.6
CsaV3_2G001300 Cucumis sativus L. HOM05D006355 ORTHO05D008284 2.6e-93 346.3 326 59.8
Hund08706 Selenicereus undatus HOM05D006355 ORTHO05D008284 2.6e-93 346.3 332 61.1
CAN.G35.5 Capsicum annuum HOM05D006355 ORTHO05D008284 9.9e-93 344.4 325 57.8
RcHm_v2.0_Chr2g0094111 Rosa chinensis HOM05D006355 ORTHO05D008284 6.4e-92 341.7 328 57.6
Sabra06G0115400 Salix brachista HOM05D006355 ORTHO05D008284 2.4e-91 339.7 370 53.5
ECA234G3558 Erigeron canadensis HOM05D006355 ORTHO05D008284 4.2e-91 339.0 328 58.2
Nn8g38760 Nelumbo nucifera HOM05D006355 ORTHO05D008284 4.2e-91 339.0 329 58.4
Nn8g41302 Nelumbo nucifera HOM05D006355 ORTHO05D008284 4.2e-91 339.0 329 58.4
COL.COLO4_18155 Corchorus olitorius HOM05D006355 ORTHO05D008284 5.4e-91 338.6 330 59.1
Sopen07g020150 Solanum pennellii HOM05D006355 ORTHO05D008284 5.4e-91 338.6 324 56.8
arahy.Tifrunner.gnm1.ann1.I94R61 Arachis hypogaea HOM05D006355 ORTHO05D008284 7.1e-91 338.2 330 59.4
Nitab4.5_0002842g0040 Nicotiana tabacum HOM05D006355 ORTHO05D008284 7.1e-91 338.2 333 56.5
Cc06_g11800 Coffea canephora HOM05D006355 ORTHO05D008284 2.7e-90 336.3 336 54.5
PGSC0003DMG400014101 Solanum tuberosum HOM05D006355 ORTHO05D008284 3.5e-90 335.9 324 57.4
Aqoxy7G01135 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 4.6e-90 335.5 332 57.8
Thhalv10022802m.g Eutrema salsugineum HOM05D006355 ORTHO05D008284 3.0e-89 332.8 327 55.7
DCAR_024718 Daucus carota HOM05D006355 ORTHO05D008284 1.9e-88 330.1 331 55.3
HanXRQChr12g0354551 Helianthus annuus HOM05D006355 ORTHO05D008284 2.5e-88 329.7 328 55.5
FAN28G1606 Fragaria x ananassa HOM05D006355 ORTHO05D008284 1.6e-87 327.0 328 56.7
FvH4_1g08060 Fragaria vesca HOM05D006355 ORTHO05D008284 2.1e-87 326.6 329 56.5
FAN19G0491 Fragaria x ananassa HOM05D006355 ORTHO05D008284 2.1e-87 326.6 329 56.5
Psat4g016280 Pisum sativum HOM05D006355 ORTHO05D008284 2.1e-87 326.6 329 56.2
SGA_v2.0_scaffold21G09447 Striga asiatica HOM05D006355 ORTHO05D008284 3.6e-87 325.9 330 55.8
TPR.G9437 Trifolium pratense HOM05D006355 ORTHO05D008284 6.2e-87 325.1 329 56.5
FAN23G1962 Fragaria x ananassa HOM05D006355 ORTHO05D008284 1.8e-86 323.6 329 56.8
Sp3g32760 Schrenkiella parvula HOM05D006355 ORTHO05D008284 4.0e-86 322.4 327 58.4
Carub.0003s3364 Capsella rubella HOM05D006355 ORTHO05D008284 6.9e-86 321.6 327 56.0
FAN26G2768 Fragaria x ananassa HOM05D006355 ORTHO05D008284 1.5e-85 320.5 341 55.7
FAN26G1509 Fragaria x ananassa HOM05D006355 ORTHO05D008284 2.0e-85 320.1 341 55.4
CARHR109830 Cardamine hirsuta HOM05D006355 ORTHO05D008284 2.6e-85 319.7 328 55.2
MD02G1085300 Malus domestica HOM05D006355 ORTHO05D008284 4.4e-85 318.9 330 54.8
Medtr4g125720 Medicago truncatula HOM05D006355 ORTHO05D008284 7.6e-85 318.2 332 53.3
PGR142G1993 Punica granatum HOM05D006355 ORTHO05D008284 7.6e-85 318.2 334 55.4
Lalb_Chr12g0199961 Lupinus albus HOM05D006355 ORTHO05D008284 9.9e-85 317.8 326 55.5
Lsat_1_v5_gn_5_143521 Lactuca sativa HOM05D006355 ORTHO05D008284 1.3e-84 317.4 322 56.5
Aa31LG8G16390 Aethionema arabicum HOM05D006355 ORTHO05D008284 2.2e-84 316.6 326 54.0
AT2G19385 Arabidopsis thaliana HOM05D006355 ORTHO05D008284 5.4e-83 312.0 327 55.0
MD15G1212400 Malus domestica HOM05D006355 ORTHO05D008284 9.3e-83 311.2 332 54.8
Gohir.A05G032100 Gossypium hirsutum HOM05D006355 ORTHO05D008284 1.2e-82 310.8 327 56.0
AUR62025162 Chenopodium quinoa HOM05D006355 ORTHO05D008284 2.5e-80 303.1 330 54.8
CDE06G0893 Ceratophyllum demersum HOM05D006355 ORTHO05D008284 1.3e-79 300.8 333 53.2
VMungo1215G0260 Vigna mungo HOM05D006355 ORTHO05D008284 1.3e-79 300.8 305 59.0
A07p01380 Brassica napus HOM05D006355 ORTHO05D008284 2.1e-79 300.1 327 55.4
BcaB03g16724 Brassica carinata HOM05D006355 ORTHO05D008284 2.8e-79 299.7 327 52.3
AL3G48940 Arabidopsis lyrata HOM05D006355 ORTHO05D008284 6.2e-79 298.5 327 52.0
BraA07t27933Z Brassica rapa HOM05D006355 ORTHO05D008284 1.8e-78 297.0 327 53.2
C07p02840 Brassica napus HOM05D006355 ORTHO05D008284 2.4e-78 296.6 326 54.9
BolC7t40681H Brassica oleracea HOM05D006355 ORTHO05D008284 2.4e-78 296.6 326 54.9
Sc08g0008680 Simmondsia chinensis HOM05D006355 ORTHO05D008284 9.0e-78 294.7 339 52.2
BcaC06g36568 Brassica carinata HOM05D006355 ORTHO05D008284 2.0e-77 293.5 327 54.7
AUR62029015 Chenopodium quinoa HOM05D006355 ORTHO05D008284 9.9e-77 291.2 332 53.0
MBI11_g07532_MAGBIO Magnolia biondii HOM05D006355 ORTHO05D008284 1.7e-76 290.4 328 52.7
EL10Ac8g19156 Beta vulgaris HOM05D006355 ORTHO05D008284 2.2e-76 290.0 412 46.6
Os01g0583200 Oryza sativa ssp. japonica HOM05D006355 ORTHO05D008284 1.0e-73 281.2 329 49.2
arahy.Tifrunner.gnm1.ann1.2VE13Z Arachis hypogaea HOM05D006355 ORTHO05D008284 1.3e-73 280.8 330 52.7
Zm00001eb357030 Zea mays HOM05D006355 ORTHO05D008284 3.9e-73 279.3 328 50.6
ATR0051G027 Amborella trichopoda HOM05D006355 ORTHO05D008284 7.4e-72 275.0 332 49.1
Dinv36798 Davidia involucrata HOM05D006355 ORTHO05D008284 2.5e-67 260.0 273 55.3
Actinidia25231 Actinidia chinensis HOM05D006355 ORTHO05D008284 9.3e-67 258.1 154 77.9
PSO063G0296 Papaver somniferum HOM05D006355 ORTHO05D008284 3.7e-63 246.1 329 47.1
PSO832G0549 Papaver somniferum HOM05D006355 ORTHO05D008284 1.5e-61 240.7 329 45.9
SEGI_15381 Sequoiadendron giganteum HOM05D006355 ORTHO05D008284 1.8e-57 227.3 329 42.6
HPP92_009733 Vanilla planifolia HOM05D006355 ORTHO05D008284 3.7e-55 219.5 331 42.6
CSS0037261 Camellia sinensis var. sinensis HOM05D006355 ORTHO05D008284 1.6e-42 177.6 265 45.3
Pp3c3_280 Physcomitrium patens HOM05D006355 ORTHO05D008284 2.1e-42 177.2 324 38.0
CBR_g39727 Chara braunii HOM05D006355 ORTHO05D008284 1.0e-41 174.9 135 62.2
unitig_8.g3528 Utricularia gibba HOM05D001583 ORTHO05D001900 1.8e-41 174.1 321 38.9
SMO200G0211 Selaginella moellendorffii HOM05D006355 ORTHO05D008284 5.7e-40 169.1 330 35.2
Mapoly0108s0017 Marchantia polymorpha HOM05D006355 ORTHO05D008284 1.3e-39 167.9 272 39.0
AagrBONN_evm.TU.Sc2ySwM_228.3887 Anthoceros agrestis HOM05D006355 ORTHO05D008284 5.9e-37 159.1 266 41.7
Carub.0003s3362 Capsella rubella HOM05D006355 ORTHO05D008284 2.2e-36 157.1 339 35.7
AT2G19380 Arabidopsis thaliana HOM05D006355 ORTHO05D011679 7.2e-35 152.1 206 42.7
AL3G48950 Arabidopsis lyrata HOM05D006355 ORTHO05D008284 9.4e-35 151.8 205 43.4
SGA_v2.0_scaffold23G10049 Striga asiatica HOM05D006355 ORTHO05D008284 1.8e-33 147.5 361 31.9
PRCOL_00003845 Prasinoderma coloniale HOM05D006355 ORTHO05D008284 4.2e-27 126.3 133 45.9
Cre17.g701050 Chlamydomonas reinhardtii HOM05D006355 ORTHO05D008284 7.2e-27 125.6 144 46.5
MCO07G733 Micromonas commoda HOM05D006355 ORTHO05D008284 4.4e-24 116.3 138 42.8
Migut.B00896 Erythranthe guttata HOM05D002142 ORTHO05D001189 6.3e-23 112.5 208 39.4
SHI30664 Sapria himalayana HOM05D006355 ORTHO05D008284 2.7e-21 107.1 176 39.8
SHI23456 Sapria himalayana HOM05D006355 ORTHO05D008284 1.3e-20 104.8 57 75.4
SHI30666 Sapria himalayana HOM05D006355 ORTHO05D008284 3.8e-20 103.2 57 73.7
Aqoxy7G02122 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 3.2e-19 100.1 240 35.8
Aqoxy4G01928 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 1.4e-17 94.7 240 35.0
Actinidia25232 Actinidia chinensis HOM05D006355 ORTHO05D008284 6.8e-09 65.9 118 39.0
GSVIVG01008148001 Vitis vinifera HOM05D006355 ORTHO05D000948 5.7e-08 62.8 91 40.7
Os01g0583300 Oryza sativa ssp. japonica HOM05D006355 ORTHO05D300111 1.3e-07 61.6 40 72.5


User provided reference genes

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