Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc27.175 Carica papaya HOM05D000641 ORTHO05D007351 1.7e-183 646.0 357 100.0
Thecc.06G244800 Theobroma cacao HOM05D000641 ORTHO05D007351 1.7e-45 187.6 341 45.7
THA.LOC104827569 Tarenaya hassleriana HOM05D000641 ORTHO05D007351 4.9e-45 186.0 290 49.0
THA.LOC104804470 Tarenaya hassleriana HOM05D000641 ORTHO05D007351 1.2e-43 181.4 301 47.5
Aa31LG1G25850 Aethionema arabicum HOM05D000641 ORTHO05D007351 1.1e-39 168.3 288 47.9
Haze_07064 Corylus avellana HOM05D000641 ORTHO05D007351 2.0e-38 164.1 337 42.7
AL5G42180 Arabidopsis lyrata HOM05D000641 ORTHO05D007351 3.8e-37 159.8 296 42.9
TWI63G1332 Tripterygium wilfordii HOM05D000641 ORTHO05D007351 3.8e-37 159.8 347 40.9
Haze_19388 Corylus avellana HOM05D000641 ORTHO05D007351 2.4e-36 157.1 340 41.5
Gohir.D12G267300 Gossypium hirsutum HOM05D000641 ORTHO05D007351 1.2e-35 154.8 326 42.3
AT2G44190 Arabidopsis thaliana HOM05D000641 ORTHO05D007351 2.1e-35 154.1 304 46.7
Gorai.008G287300 Gossypium raimondii HOM05D000641 ORTHO05D007351 1.0e-34 151.8 323 42.1
Thhalv10001435m.g Eutrema salsugineum HOM05D000641 ORTHO05D007351 2.3e-34 150.6 292 46.6
Sp5g03180 Schrenkiella parvula HOM05D000641 ORTHO05D007351 3.9e-34 149.8 294 42.5
Thhalv10006479m.g Eutrema salsugineum HOM05D000641 ORTHO05D007351 3.3e-33 146.7 287 43.2
Sp4g26270 Schrenkiella parvula HOM05D000641 ORTHO05D007351 4.8e-32 142.9 310 44.5
CARHR170320 Cardamine hirsuta HOM05D000641 ORTHO05D007351 6.2e-32 142.5 284 44.4
AT3G60000 Arabidopsis thaliana HOM05D000641 ORTHO05D007351 1.8e-31 141.0 290 40.3
BraA05t19413Z Brassica rapa HOM05D000641 ORTHO05D007351 2.4e-31 140.6 303 47.5
Sabra16G0008000 Salix brachista HOM05D000641 ORTHO05D007351 6.9e-31 139.0 322 39.4
CiPaw.10G085300 Carya illinoinensis HOM05D000641 ORTHO05D007351 1.2e-30 138.3 368 37.8
A05p04280 Brassica napus HOM05D000641 ORTHO05D007351 3.4e-30 136.7 303 46.5
Carub.0004s2676 Capsella rubella HOM05D000641 ORTHO05D007351 2.2e-29 134.0 303 43.6
Atru.chr1.2252 Acer truncatum HOM05D000641 ORTHO05D007351 3.8e-29 133.3 297 39.4
Potri.006G000400 Populus trichocarpa HOM05D000641 ORTHO05D007351 8.4e-29 132.1 313 38.3
Ciclev10014837m.g Citrus clementina HOM05D000641 ORTHO05D007351 1.1e-28 131.7 352 35.8
AL4G43140 Arabidopsis lyrata HOM05D000641 ORTHO05D007351 2.4e-28 130.6 308 42.5
Eucgr.D00975 Eucalyptus grandis HOM05D000641 ORTHO05D007351 3.2e-28 130.2 316 40.2
MD10G1342500 Malus domestica HOM05D000641 ORTHO05D007351 3.5e-27 126.7 371 36.1
C04p05060 Brassica napus HOM05D000641 ORTHO05D007351 4.6e-27 126.3 276 44.2
FAN21G1917 Fragaria x ananassa HOM05D000641 ORTHO05D007351 4.6e-27 126.3 326 39.9
Prupe.4G000100 Prunus persica HOM05D000641 ORTHO05D007351 4.6e-27 126.3 402 35.3
FAN25G1388 Fragaria x ananassa HOM05D000641 ORTHO05D007351 7.9e-27 125.6 332 38.9
BcaC02g12331 Brassica carinata HOM05D000641 ORTHO05D007351 1.8e-26 124.4 300 44.0
FvH4_3g00020 Fragaria vesca HOM05D000641 ORTHO05D007351 2.3e-26 124.0 332 39.2
BolC4t22139H Brassica oleracea HOM05D000641 ORTHO05D007351 3.0e-26 123.6 276 44.2
BraA03t11678Z Brassica rapa HOM05D000641 ORTHO05D007351 1.1e-25 121.7 290 41.0
A03p24720 Brassica napus HOM05D000641 ORTHO05D007351 4.3e-25 119.8 290 39.3
RcHm_v2.0_Chr5g0000021 Rosa chinensis HOM05D000641 ORTHO05D007351 7.4e-25 119.0 345 36.5
C03p29460 Brassica napus HOM05D000641 ORTHO05D007351 1.3e-24 118.2 289 39.4
PGR004G1652 Punica granatum HOM05D000641 ORTHO05D007351 1.6e-24 117.9 353 35.7
BcaC01g05182 Brassica carinata HOM05D000641 ORTHO05D007351 2.1e-24 117.5 289 40.1
BolC3t15294H Brassica oleracea HOM05D000641 ORTHO05D007351 2.1e-24 117.5 289 40.1
QL05p066137 Quercus lobata HOM05D000641 ORTHO05D007351 2.1e-24 117.5 341 37.2
COL.COLO4_31969 Corchorus olitorius HOM05D007436 ORTHO05D009398 4.8e-24 116.3 314 35.7
Actinidia02270 Actinidia chinensis HOM05D000641 ORTHO05D007351 2.4e-23 114.0 373 35.1
Gohir.A12G266850 Gossypium hirsutum HOM05D000641 ORTHO05D007351 3.1e-23 113.6 306 36.9
Manes.10G068200 Manihot esculenta HOM05D000641 ORTHO05D007351 9.0e-23 112.1 373 37.5
CARHR139350 Cardamine hirsuta HOM05D000641 ORTHO05D007351 1.2e-22 111.7 294 39.5
Carub.0005s2673 Capsella rubella HOM05D000641 ORTHO05D007351 1.5e-22 111.3 231 39.0
TAR623G1040 Trochodendron aralioides HOM05D000641 ORTHO05D007351 2.6e-22 110.5 417 31.7
Aqoxy3G02597 Aquilegia oxysepala HOM05D000641 ORTHO05D007351 3.4e-22 110.2 380 34.7
HanXRQChr16g0515301 Helianthus annuus HOM05D000641 ORTHO05D007351 4.5e-22 109.8 357 33.6
BolC4t28593H Brassica oleracea HOM05D000641 ORTHO05D007351 1.7e-21 107.8 285 37.5
BcaB01g03325 Brassica carinata HOM05D000641 ORTHO05D007351 3.2e-20 103.6 295 37.6
arahy.Tifrunner.gnm1.ann1.IFG75D Arachis hypogaea HOM05D000641 ORTHO05D007351 5.5e-20 102.8 362 35.1
arahy.Tifrunner.gnm1.ann1.J86N0J Arachis hypogaea HOM05D000641 ORTHO05D007351 5.5e-20 102.8 354 36.2
Dinv04374 Davidia involucrata HOM05D000641 ORTHO05D007351 1.6e-19 101.3 473 31.9
PSO063G1593 Papaver somniferum HOM05D000641 ORTHO05D007351 2.7e-19 100.5 393 32.8
PSO782G1815 Papaver somniferum HOM05D000641 ORTHO05D007351 1.0e-18 98.6 392 33.7
Potri.016G000300 Populus trichocarpa HOM05D000641 ORTHO05D007351 3.0e-18 97.1 98 56.1
Nn1g08378 Nelumbo nucifera HOM05D000641 ORTHO05D007351 3.9e-18 96.7 398 32.2
Hund04725 Selenicereus undatus HOM05D000641 ORTHO05D007351 3.9e-18 96.7 364 32.7
BraA04t18783Z Brassica rapa HOM05D000641 ORTHO05D007351 6.7e-18 95.9 285 34.0
Sc11g0005780 Simmondsia chinensis HOM05D000641 ORTHO05D007351 1.9e-17 94.4 282 35.5
BcaB06g29364 Brassica carinata HOM05D000641 ORTHO05D007351 7.4e-17 92.4 290 35.5
SGA_v2.0_scaffold186G40163 Striga asiatica HOM05D000641 ORTHO05D007351 7.4e-17 92.4 327 33.0
Lalb_Chr15g0088501 Lupinus albus HOM05D000641 ORTHO05D007351 9.7e-17 92.0 372 30.4
EL10Ac3g05668 Beta vulgaris HOM05D000641 ORTHO05D007351 3.7e-16 90.1 334 33.2
vmacro03582 Vaccinium macrocarpon HOM05D000641 ORTHO05D007351 6.3e-16 89.4 110 53.6
CSS0037478 Camellia sinensis var. sinensis HOM05D000641 ORTHO05D007351 1.1e-15 88.6 474 31.4
Oeu031376.1 Olea europaea HOM05D000040 ORTHO05D007351 1.8e-15 87.8 347 33.4
Lalb_Chr20g0119771 Lupinus albus HOM05D000641 ORTHO05D007351 2.4e-15 87.4 365 30.7
MD00G1208400 Malus domestica HOM05D000641 ORTHO05D007351 9.0e-15 85.5 184 42.4
Rhsim13G0137700 Rhododendron simsii HOM05D000641 ORTHO05D007351 9.0e-15 85.5 420 31.0
VMungo0540G1063 Vigna mungo HOM05D000641 ORTHO05D007351 2.6e-14 84.0 342 33.0
Oeu031373.1 Olea europaea HOM05D000641 ORTHO05D007351 3.4e-14 83.6 295 34.2
MSTRG.13094 Avicennia marina HOM05D000641 ORTHO05D007351 5.9e-14 82.8 339 31.9
MSTRG.14577 Avicennia marina HOM05D000641 ORTHO05D007351 7.6e-14 82.4 329 34.3
Ca_00787_v3 Cicer arietinum L. HOM05D000641 ORTHO05D007351 1.0e-13 82.0 289 31.8
Phvul.006G134011 Phaseolus vulgaris HOM05D000641 ORTHO05D007351 1.3e-13 81.6 313 31.0
Migut.M01486 Erythranthe guttata HOM05D000641 ORTHO05D007351 5.0e-13 79.7 296 31.8
Lj1P1250T23 Lonicera japonica HOM05D000641 ORTHO05D007351 5.0e-13 79.7 164 39.6
QL05p065797 Quercus lobata HOM05D000641 ORTHO05D007351 5.0e-13 79.7 289 35.6
Oeu025985.1 Olea europaea HOM05D000641 ORTHO05D007351 8.5e-13 79.0 348 32.5
Lsat_1_v5_gn_4_65181 Lactuca sativa HOM05D000641 ORTHO05D007351 1.9e-12 77.8 89 53.9
Peaxi162Scf00647g00043 Petunia axillaris HOM05D000641 ORTHO05D007351 2.5e-12 77.4 149 39.6
unitig_0.g969 Utricularia gibba HOM05D000641 ORTHO05D007351 2.5e-12 77.4 306 31.0
Oeu025984.1 Olea europaea HOM05D000641 ORTHO05D007351 3.2e-12 77.0 348 33.0
Glyma.15G124000 Glycine max HOM05D000641 ORTHO05D007351 2.1e-11 74.3 177 40.7
DCAR_022840 Daucus carota HOM05D000641 ORTHO05D007351 3.6e-11 73.6 356 30.9
Lj6g0021862 Lotus japonicus HOM05D000641 ORTHO05D007351 3.6e-11 73.6 333 27.3
TPR.G10485 Trifolium pratense HOM05D000641 ORTHO05D007351 3.6e-11 73.6 279 32.3
ECA234G3276 Erigeron canadensis HOM05D000641 ORTHO05D007351 1.0e-10 72.0 339 32.2
CDE06G1215 Ceratophyllum demersum HOM05D000222 ORTHO05D000329 1.3e-10 71.6 112 42.9
Ca_11372_v3 Cicer arietinum L. HOM05D000641 ORTHO05D007351 1.8e-10 71.2 247 32.4
MBI14_g11780_MAGBIO Magnolia biondii HOM05D000641 ORTHO05D007351 1.8e-10 71.2 421 29.0
A04p33240 Brassica napus HOM05D000914 ORTHO05D000718 6.7e-10 69.3 274 30.3
PGSC0003DMG400027505 Solanum tuberosum HOM05D000641 ORTHO05D007351 6.7e-10 69.3 111 43.2
Nitab4.5_0005056g0070 Nicotiana tabacum HOM05D000641 ORTHO05D007351 8.8e-10 68.9 170 35.3
Ah.07g207340 Amaranthus hybridus HOM05D000641 ORTHO05D007351 1.9e-09 67.8 311 32.2
Psat1g170840 Pisum sativum HOM05D000641 ORTHO05D007351 3.3e-09 67.0 280 32.5
Medtr2g028220 Medicago truncatula HOM05D000641 ORTHO05D007351 5.7e-09 66.2 195 33.3
Cc09_g00010 Coffea canephora HOM05D000641 ORTHO05D007351 1.7e-08 64.7 125 40.0
CAN.G134.47 Capsicum annuum HOM05D000641 ORTHO05D007351 3.7e-08 63.5 174 33.9
Migut.H01644 Erythranthe guttata HOM05D000641 ORTHO05D007351 4.8e-08 63.2 352 29.3
Glyma.09G018100 Glycine max HOM05D000641 ORTHO05D007351 4.8e-08 63.2 309 28.5
SGA_v2.0_scaffold239G43988 Striga asiatica HOM05D000641 ORTHO05D007351 8.2e-08 62.4 316 30.1
HPP92_020491 Vanilla planifolia HOM05D000641 ORTHO05D007351 8.2e-08 62.4 144 37.5
Nitab4.5_0001611g0110 Nicotiana tabacum HOM05D000641 ORTHO05D007351 1.4e-07 61.6 168 35.1
Solyc01g096840.3 Solanum lycopersicum HOM05D000641 ORTHO05D007351 2.4e-07 60.8 112 41.1
Sopen01g040550 Solanum pennellii HOM05D000641 ORTHO05D007351 2.4e-07 60.8 112 40.2
Nitab4.5_0002611g0050 Nicotiana tabacum HOM05D000641 ORTHO05D000944 4.1e-07 60.1 47 55.3
Nitab4.5_0007821g0020 Nicotiana tabacum HOM05D000641 ORTHO05D000944 4.1e-07 60.1 47 55.3
CAN.G160.24 Capsicum annuum HOM05D000641 ORTHO05D000944 6.9e-07 59.3 47 55.3
AUR62016006 Chenopodium quinoa HOM05D000641 ORTHO05D007351 9.1e-07 58.9 316 28.5
Lj7A462T54 Lonicera japonica HOM05D000641 ORTHO05D000944 1.5e-06 58.2 48 50.0
GSVIVG01023645001 Vitis vinifera HOM05D000641 ORTHO05D000944 2.0e-06 57.8 54 55.6
HPP92_020488 Vanilla planifolia HOM05D000641 ORTHO05D007351 3.4e-06 57.0 145 36.6
CSS0045716 Camellia sinensis var. sinensis HOM05D000641 ORTHO05D000944 4.5e-06 56.6 47 53.2
Oeu015338.1 Olea europaea HOM05D000641 ORTHO05D000944 4.5e-06 56.6 48 54.2
MSTRG.10710 Avicennia marina HOM05D000641 ORTHO05D000944 5.9e-06 56.2 47 55.3
PGSC0003DMG400011200 Solanum tuberosum HOM05D000641 ORTHO05D000944 5.9e-06 56.2 43 55.8
Actinidia24373 Actinidia chinensis HOM05D000641 ORTHO05D000944 7.7e-06 55.8 43 60.5
Dinv41356 Davidia involucrata HOM05D000641 ORTHO05D000944 7.7e-06 55.8 43 58.1
Oeu028999.1 Olea europaea HOM05D000641 ORTHO05D000944 7.7e-06 55.8 53 50.9


User provided reference genes

Program Settings