Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc26.238 Carica papaya HOM05D005865 ORTHO05D006867 5.2e-148 527.7 271 100.0
CiPaw.07G141800 Carya illinoinensis HOM05D005865 ORTHO05D006867 1.6e-56 223.8 140 79.3
Potri.005G247500 Populus trichocarpa HOM05D005865 ORTHO05D006867 1.6e-56 223.8 170 65.9
Thecc.08G054600 Theobroma cacao HOM05D005865 ORTHO05D006867 1.6e-56 223.8 170 66.5
Duzib093G0711 Durio zibethinus HOM05D005865 ORTHO05D006867 8.0e-56 221.5 170 66.5
GSVIVG01008710001 Vitis vinifera HOM05D005865 ORTHO05D006867 8.0e-56 221.5 164 67.1
Atru.chr13.184 Acer truncatum HOM05D005865 ORTHO05D006867 1.0e-55 221.1 160 67.5
Ciclev10000742m.g Citrus clementina HOM05D005865 ORTHO05D006867 1.0e-55 221.1 171 65.5
Sabra05G0191400 Salix brachista HOM05D005865 ORTHO05D006867 3.0e-55 219.5 173 61.8
QL02p013522 Quercus lobata HOM05D005865 ORTHO05D006867 6.8e-55 218.4 140 75.0
TAR381G0423 Trochodendron aralioides HOM05D005865 ORTHO05D006867 4.4e-54 215.7 168 66.7
Cfa014029 Carpinus fangiana HOM05D005865 ORTHO05D006867 2.2e-53 213.4 147 71.4
Haze_22735 Corylus avellana HOM05D005865 ORTHO05D006867 2.8e-53 213.0 147 71.4
Manes.18G007801 Manihot esculenta HOM05D005865 ORTHO05D006867 4.9e-53 212.2 165 64.8
Actinidia37960 Actinidia chinensis HOM05D005865 ORTHO05D006867 9.2e-52 208.0 170 62.9
PSO675G0073 Papaver somniferum HOM05D005865 ORTHO05D006867 9.2e-52 208.0 176 61.4
Dinv31911 Davidia involucrata HOM05D005865 ORTHO05D006867 1.2e-51 207.6 159 66.7
Gohir.A05G181600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 1.2e-51 207.6 170 62.4
Gohir.D05G184600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 1.2e-51 207.6 170 62.4
PSO541G4963 Papaver somniferum HOM05D005865 ORTHO05D006867 1.6e-51 207.2 147 69.4
CSS0021595 Camellia sinensis var. sinensis HOM05D005865 ORTHO05D006867 5.9e-51 205.3 169 62.1
TWI36G0296 Tripterygium wilfordii HOM05D005865 ORTHO05D006867 1.3e-50 204.1 171 63.2
Gorai.009G190100 Gossypium raimondii HOM05D005865 ORTHO05D006867 2.3e-50 203.4 170 61.8
Migut.N03192 Erythranthe guttata HOM05D005865 ORTHO05D006867 6.6e-50 201.8 153 67.3
MD08G1005300 Malus domestica HOM05D005865 ORTHO05D006867 6.6e-50 201.8 170 61.2
Lsat_1_v5_gn_2_5921 Lactuca sativa HOM05D005865 ORTHO05D006867 1.5e-49 200.7 145 66.2
Lj5g0011422 Lotus japonicus HOM05D005865 ORTHO05D006867 1.9e-49 200.3 147 66.0
Peaxi162Scf00174g01413 Petunia axillaris HOM05D005865 ORTHO05D006867 2.5e-49 199.9 179 57.0
Cc10_g00980 Coffea canephora HOM05D005865 ORTHO05D006867 4.3e-49 199.1 165 63.0
VMungo0647G1107 Vigna mungo HOM05D005865 ORTHO05D006867 4.3e-49 199.1 146 65.8
MSTRG.1133 Avicennia marina HOM05D005865 ORTHO05D006867 7.3e-49 198.4 125 75.2
Psat0s4771g0080 Pisum sativum HOM05D005865 ORTHO05D006867 7.3e-49 198.4 145 66.2
vmacro04388 Vaccinium macrocarpon HOM05D005865 ORTHO05D006867 1.2e-48 197.6 168 61.3
Glyma.14G222900 Glycine max HOM05D005865 ORTHO05D006867 1.6e-48 197.2 151 66.9
Ca_13490_v3 Cicer arietinum L. HOM05D005865 ORTHO05D006867 2.1e-48 196.8 147 66.0
Prupe.1G357400 Prunus persica HOM05D005865 ORTHO05D006867 2.1e-48 196.8 177 61.6
Sc15g0004650 Simmondsia chinensis HOM05D005865 ORTHO05D006867 2.1e-48 196.8 175 61.1
Aqoxy6G01868 Aquilegia oxysepala HOM05D005865 ORTHO05D006867 3.6e-48 196.1 130 73.8
Hma1.2p1_1100F.1_g257160 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 3.6e-48 196.1 179 58.1
Phvul.001G001600 Phaseolus vulgaris HOM05D005865 ORTHO05D006867 1.0e-47 194.5 172 60.5
RcHm_v2.0_Chr6g0303901 Rosa chinensis HOM05D005865 ORTHO05D006867 1.0e-47 194.5 178 59.6
Lj4A15G44 Lonicera japonica HOM05D005865 ORTHO05D006867 1.8e-47 193.7 170 60.6
SalBow6G0433 Salvia bowleyana HOM05D005865 ORTHO05D006867 4.0e-47 192.6 153 62.7
Nn5g30889 Nelumbo nucifera HOM05D005865 ORTHO05D006867 5.2e-47 192.2 167 60.5
FvH4_2g37810 Fragaria vesca HOM05D005865 ORTHO05D006867 6.8e-47 191.8 137 67.9
PGR031G3425 Punica granatum HOM05D005865 ORTHO05D006867 8.9e-47 191.4 167 60.5
FAN27G0680 Fragaria x ananassa HOM05D005865 ORTHO05D006867 2.0e-46 190.3 191 55.0
THA.LOC104813767 Tarenaya hassleriana HOM05D005865 ORTHO05D006867 4.4e-46 189.1 166 61.4
BcaNung03380 Brassica carinata HOM05D005865 ORTHO05D006867 7.5e-46 188.3 121 74.4
C07p23040 Brassica napus HOM05D005865 ORTHO05D006867 7.5e-46 188.3 121 74.4
BolC7t42845H Brassica oleracea HOM05D005865 ORTHO05D006867 7.5e-46 188.3 121 74.4
HanXRQChr14g0428991 Helianthus annuus HOM05D005865 ORTHO05D006867 9.8e-46 188.0 122 71.3
Rhsim07G0252700 Rhododendron simsii HOM05D005865 ORTHO05D006867 9.8e-46 188.0 164 57.9
CAN.G311.92 Capsicum annuum HOM05D005865 ORTHO05D006867 1.3e-45 187.6 167 58.1
PGSC0003DMG400009964 Solanum tuberosum HOM05D005865 ORTHO05D006867 1.7e-45 187.2 178 56.7
Medtr1g026400 Medicago truncatula HOM05D005865 ORTHO05D006867 2.2e-45 186.8 138 64.5
A07p15800 Brassica napus HOM05D005865 ORTHO05D006867 2.9e-45 186.4 121 74.4
BraA07t29307Z Brassica rapa HOM05D005865 ORTHO05D006867 2.9e-45 186.4 121 74.4
Sopen04g035760 Solanum pennellii HOM05D005865 ORTHO05D006867 2.9e-45 186.4 167 56.9
SGA_v2.0_scaffold25G11198 Striga asiatica HOM05D005865 ORTHO05D006867 2.9e-45 186.4 113 75.2
Solyc04g082130.4 Solanum lycopersicum HOM05D005865 ORTHO05D006867 3.7e-45 186.0 187 53.5
CsaV3_4G037060 Cucumis sativus L. HOM05D005865 ORTHO05D006867 4.9e-45 185.7 176 54.0
Sed0014892 Sechium edule HOM05D005865 ORTHO05D006867 4.9e-45 185.7 135 63.7
ClCG05G015260 Citrullus lanatus HOM05D005865 ORTHO05D006867 6.4e-45 185.3 167 56.9
Eucgr.F03532 Eucalyptus grandis HOM05D005865 ORTHO05D006867 6.4e-45 185.3 170 57.1
CARHR020860 Cardamine hirsuta HOM05D005865 ORTHO05D006867 8.3e-45 184.9 119 74.8
Hma1.2p1_1100F.1_g257170 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 8.3e-45 184.9 117 74.4
ECA238G0937 Erigeron canadensis HOM05D005865 ORTHO05D006867 1.1e-44 184.5 176 56.8
Lalb_Chr03g0033591 Lupinus albus HOM05D005865 ORTHO05D006867 1.1e-44 184.5 176 56.2
AL1G33330 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 1.4e-44 184.1 137 67.2
Thhalv10007426m.g Eutrema salsugineum HOM05D005865 ORTHO05D006867 1.4e-44 184.1 135 68.9
BcaB03g14323 Brassica carinata HOM05D005865 ORTHO05D006867 2.4e-44 183.3 121 73.6
BcaB07g32044 Brassica carinata HOM05D005865 ORTHO05D006867 2.4e-44 183.3 135 67.4
AT1G20410 Arabidopsis thaliana HOM05D005865 ORTHO05D006867 3.2e-44 183.0 137 66.4
BcaC05g25951 Brassica carinata HOM05D005865 ORTHO05D006867 3.2e-44 183.0 135 68.9
A06p16480 Brassica napus HOM05D005865 ORTHO05D006867 3.2e-44 183.0 135 67.4
C05p19010 Brassica napus HOM05D005865 ORTHO05D006867 3.2e-44 183.0 135 68.9
BolC5t30602H Brassica oleracea HOM05D005865 ORTHO05D006867 3.2e-44 183.0 135 68.9
Ah.00g000500 Amaranthus hybridus HOM05D005865 ORTHO05D006867 4.1e-44 182.6 176 55.1
AL1G33260 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 7.0e-44 181.8 134 67.2
Aa31LG7G4730 Aethionema arabicum HOM05D005865 ORTHO05D006867 9.2e-44 181.4 137 66.4
Carub.0001s1989 Capsella rubella HOM05D005865 ORTHO05D006867 1.2e-43 181.0 179 54.2
Sp1g18130 Schrenkiella parvula HOM05D005865 ORTHO05D006867 1.2e-43 181.0 179 55.3
DCAR_013898 Daucus carota HOM05D005865 ORTHO05D006867 2.0e-43 180.3 166 56.0
ATR0665G248 Amborella trichopoda HOM05D005865 ORTHO05D006867 2.7e-43 179.9 140 62.9
BraA06t24751Z Brassica rapa HOM05D005865 ORTHO05D006867 3.5e-43 179.5 135 66.7
Hund05136 Selenicereus undatus HOM05D005865 ORTHO05D006867 3.5e-43 179.5 121 70.2
CANSAT56G1424 Cannabis sativa HOM05D005865 ORTHO05D006867 4.6e-43 179.1 182 54.4
Os04g0561700 Oryza sativa ssp. japonica HOM05D005865 ORTHO05D006867 1.0e-42 177.9 174 55.2
arahy.Tifrunner.gnm1.ann1.88Q24L Arachis hypogaea HOM05D005865 ORTHO05D006867 3.9e-42 176.0 173 52.6
SEGI_14934 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 5.6e-41 172.2 140 60.0
HPP92_014547 Vanilla planifolia HOM05D005865 ORTHO05D006867 5.6e-41 172.2 131 64.1
Zm00001eb074060 Zea mays HOM05D005865 ORTHO05D006867 5.6e-41 172.2 171 54.4
arahy.Tifrunner.gnm1.ann1.YCE7MW Arachis hypogaea HOM05D005865 ORTHO05D006867 1.1e-39 167.9 167 52.7
COL.COLO4_26054 Corchorus olitorius HOM05D005865 ORTHO05D006867 2.0e-38 163.7 101 78.2
Pp3c20_10980 Physcomitrium patens HOM05D005865 ORTHO05D006867 3.4e-38 162.9 127 57.5
A07p15700 Brassica napus HOM05D005865 ORTHO05D006867 4.4e-38 162.5 100 78.0
AUR62036767 Chenopodium quinoa HOM05D005865 ORTHO05D006867 9.8e-38 161.4 94 80.9
AUR62013839 Chenopodium quinoa HOM05D005865 ORTHO05D006867 3.7e-37 159.5 108 72.2
EL10Ac1g02030 Beta vulgaris HOM05D005865 ORTHO05D006867 8.3e-37 158.3 97 75.3
Nitab4.5_0000588g0310 Nicotiana tabacum HOM05D005865 ORTHO05D006867 3.2e-36 156.4 95 75.8
MELO3C017004.2 Cucumis melo HOM05D005865 ORTHO05D006867 1.0e-34 151.4 93 75.3
Mapoly0006s0010 Marchantia polymorpha HOM05D005865 ORTHO05D006867 8.6e-34 148.3 124 54.0
AagrBONN_evm.TU.Sc2ySwM_344.4811 Anthoceros agrestis HOM05D005865 ORTHO05D006867 1.5e-30 137.5 161 44.1
CDE02G0067 Ceratophyllum demersum HOM05D005865 ORTHO05D006867 2.9e-29 133.3 94 67.0
unitig_747.g21718 Utricularia gibba HOM05D005865 ORTHO05D006867 4.1e-28 129.4 76 77.6
SMO364G0210 Selaginella moellendorffii HOM05D005865 ORTHO05D006867 3.0e-26 123.2 147 46.9
CBR_g81579 Chara braunii HOM05D005865 ORTHO05D006867 2.5e-25 120.2 112 50.0
MELO3C035627.2 Cucumis melo HOM05D005865 ORTHO05D006867 3.5e-19 99.8 86 57.0
MD15G1004800 Malus domestica HOM05D005865 ORTHO05D006867 6.6e-18 95.5 69 68.1
BcaC07g42576 Brassica carinata HOM05D005865 ORTHO05D006867 2.1e-16 90.5 94 53.2
MCO16G112 Micromonas commoda HOM05D005865 ORTHO05D006867 1.1e-15 88.2 86 50.0
SHI04101 Sapria himalayana HOM05D005865 ORTHO05D006867 3.1e-15 86.7 54 72.2
Cre12.g506900 Chlamydomonas reinhardtii HOM05D005865 ORTHO05D006867 9.3e-12 75.1 105 40.0
PRCOL_00003715 Prasinoderma coloniale HOM05D005865 ORTHO05D006867 4.3e-09 66.2 110 31.8
MELO3C032646.2 Cucumis melo HOM05D005865 ORTHO05D006867 5.3e-07 59.3 43 65.1
MELO3C031410.2 Cucumis melo HOM05D005865 ORTHO05D006867 7.6e-06 55.5 44 61.4


User provided reference genes

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