Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc25.56 Carica papaya HOM05D006300 ORTHO05D007623 1.1e-106 390.2 222 100.0
Duzib192G0510 Durio zibethinus HOM05D006300 ORTHO05D007623 5.1e-32 142.1 184 53.8
Manes.04G139300 Manihot esculenta HOM05D006300 ORTHO05D007623 2.6e-28 129.8 173 48.0
Duzib235G0903 Durio zibethinus HOM05D006300 ORTHO05D007623 1.7e-27 127.1 180 47.2
Actinidia21757 Actinidia chinensis HOM05D006300 ORTHO05D007623 8.4e-27 124.8 169 49.7
COL.COLO4_30656 Corchorus olitorius HOM05D006300 ORTHO05D007623 2.1e-25 120.2 178 49.4
Thecc.06G111200 Theobroma cacao HOM05D006300 ORTHO05D007623 2.7e-25 119.8 173 50.9
MD17G1174400 Malus domestica HOM05D006300 ORTHO05D007623 6.0e-25 118.6 173 48.6
QL05p012743 Quercus lobata HOM05D006300 ORTHO05D007623 2.3e-24 116.7 152 53.3
Duzib160G0060 Durio zibethinus HOM05D006300 ORTHO05D007623 3.9e-24 115.9 171 50.9
Dinv30382 Davidia involucrata HOM05D006300 ORTHO05D007623 6.6e-24 115.2 171 49.7
Prupe.3G050100 Prunus persica HOM05D006300 ORTHO05D007623 6.6e-24 115.2 173 48.6
Gohir.D03G056300 Gossypium hirsutum HOM05D006300 ORTHO05D007623 3.3e-23 112.8 169 49.1
Haze_15947 Corylus avellana HOM05D006300 ORTHO05D007623 4.3e-23 112.5 175 46.9
Manes.11G026800 Manihot esculenta HOM05D006300 ORTHO05D007623 7.3e-23 111.7 170 42.4
Gorai.003G059300 Gossypium raimondii HOM05D006300 ORTHO05D007623 9.6e-23 111.3 169 48.5
Gohir.A02G115200 Gossypium hirsutum HOM05D006300 ORTHO05D007623 2.1e-22 110.2 172 50.0
Gohir.D10G061000 Gossypium hirsutum HOM05D006300 ORTHO05D007623 2.8e-22 109.8 222 36.9
Gorai.011G065200 Gossypium raimondii HOM05D006300 ORTHO05D007623 1.1e-21 107.8 222 36.5
CANSAT56G1450 Cannabis sativa HOM05D006300 ORTHO05D007623 1.4e-21 107.5 170 47.6
Potri.003G038600 Populus trichocarpa HOM05D006300 ORTHO05D007623 6.9e-21 105.1 167 49.1
CiPaw.02G140400 Carya illinoinensis HOM05D006300 ORTHO05D007623 8.9e-21 104.8 148 50.7
THA.LOC104812213 Tarenaya hassleriana HOM05D006300 ORTHO05D007623 1.2e-20 104.4 175 42.3
CiPaw.01G225300 Carya illinoinensis HOM05D006300 ORTHO05D007623 2.6e-20 103.2 162 42.0
GSVIVG01016850001 Vitis vinifera HOM05D006300 ORTHO05D007623 3.4e-20 102.8 137 51.8
Gohir.A10G059500 Gossypium hirsutum HOM05D006300 ORTHO05D007623 4.4e-20 102.4 222 38.3
Peaxi162Scf00038g01529 Petunia axillaris HOM05D006300 ORTHO05D007623 3.8e-19 99.4 163 39.3
Dinv37916 Davidia involucrata HOM05D006300 ORTHO05D007623 1.9e-18 97.1 169 39.6
AT1G17665 Arabidopsis thaliana HOM05D006300 ORTHO05D007623 2.1e-17 93.6 155 43.2
Atru.chr1.3720 Acer truncatum HOM05D001008 ORTHO05D003146 4.6e-17 92.4 176 37.5
arahy.Tifrunner.gnm1.ann1.X9C73S Arachis hypogaea HOM05D006300 ORTHO05D007623 6.0e-17 92.0 163 40.5
Sabra03G0025100 Salix brachista HOM05D006300 ORTHO05D007623 6.0e-17 92.0 164 48.2
PGSC0003DMG400002589 Solanum tuberosum HOM05D006300 ORTHO05D007623 6.0e-17 92.0 151 45.0
Ah.15g094170 Amaranthus hybridus HOM05D006300 ORTHO05D007623 7.8e-17 91.7 211 35.5
Sopen03g040370 Solanum pennellii HOM05D006300 ORTHO05D007623 7.8e-17 91.7 151 41.7
arahy.Tifrunner.gnm1.ann1.F4I7X2 Arachis hypogaea HOM05D006300 ORTHO05D007623 1.0e-16 91.3 210 38.1
CARHR018270 Cardamine hirsuta HOM05D006300 ORTHO05D007623 1.7e-16 90.5 148 41.9
Solyc03g121560.3 Solanum lycopersicum HOM05D006300 ORTHO05D007623 1.7e-16 90.5 209 39.2
Thhalv10008108m.g Eutrema salsugineum HOM05D006300 ORTHO05D007623 5.1e-16 89.0 151 41.7
Nitab4.5_0001295g0030 Nicotiana tabacum HOM05D006300 ORTHO05D007623 5.1e-16 89.0 166 40.4
CSS0019345 Camellia sinensis var. sinensis HOM05D006300 ORTHO05D007623 6.6e-16 88.6 169 41.4
Nitab4.5_0007429g0010 Nicotiana tabacum HOM05D006300 ORTHO05D007623 6.6e-16 88.6 138 47.1
AL1G29990 Arabidopsis lyrata HOM05D006300 ORTHO05D007623 8.7e-16 88.2 147 42.2
Lalb_Chr24g0396361 Lupinus albus HOM05D006300 ORTHO05D007623 1.9e-15 87.0 136 40.4
Lj9P518T56 Lonicera japonica HOM05D006300 ORTHO05D007623 3.3e-15 86.3 161 44.1
ClCG09G000650 Citrullus lanatus HOM05D006300 ORTHO05D007623 1.3e-14 84.3 140 42.1
MSTRG.10986 Avicennia marina HOM05D006300 ORTHO05D007623 1.6e-14 84.0 169 37.3
vmacro18787 Vaccinium macrocarpon HOM05D006300 ORTHO05D007623 1.6e-14 84.0 138 50.0
TAR624G0799 Trochodendron aralioides HOM05D006300 ORTHO05D007623 3.6e-14 82.8 180 37.2
CsaV3_7G034830 Cucumis sativus L. HOM05D006300 ORTHO05D007623 8.1e-14 81.6 138 49.3
TAR636G0696 Trochodendron aralioides HOM05D006300 ORTHO05D007623 8.1e-14 81.6 191 38.2
CAN.G1389.16 Capsicum annuum HOM05D006300 ORTHO05D007623 1.4e-13 80.9 130 49.2
Nn6g35476 Nelumbo nucifera HOM05D006300 ORTHO05D007623 1.4e-13 80.9 187 40.6
Sp1g15770 Schrenkiella parvula HOM05D006300 ORTHO05D007623 4.0e-13 79.3 165 45.5
MELO3C024394.2 Cucumis melo HOM05D006300 ORTHO05D007623 6.9e-13 78.6 138 47.1
BcaB07g34023 Brassica carinata HOM05D006300 ORTHO05D007623 9.0e-13 78.2 50 74.0
A06p13560 Brassica napus HOM05D006300 ORTHO05D007623 9.0e-13 78.2 50 74.0
BraA06t24508Z Brassica rapa HOM05D006300 ORTHO05D007623 9.0e-13 78.2 50 74.0
Medtr2g100100 Medicago truncatula HOM05D006300 ORTHO05D007623 9.0e-13 78.2 133 42.9
BcaC05g25688 Brassica carinata HOM05D006300 ORTHO05D007623 1.2e-12 77.8 59 67.8
C05p16080 Brassica napus HOM05D006300 ORTHO05D007623 1.2e-12 77.8 59 67.8
BolC5t30308H Brassica oleracea HOM05D006300 ORTHO05D007623 1.2e-12 77.8 59 67.8
Carub.0001s1740 Capsella rubella HOM05D006300 ORTHO05D007623 1.5e-12 77.4 158 40.5
PGR102G2043 Punica granatum HOM05D006300 ORTHO05D007623 2.6e-12 76.6 78 53.8
Lj3g0013508 Lotus japonicus HOM05D006300 ORTHO05D007623 3.4e-12 76.3 63 61.9
PGR102G2710 Punica granatum HOM05D006300 ORTHO05D007623 3.4e-12 76.3 76 53.9
Rhsim08G0233100 Rhododendron simsii HOM05D006300 ORTHO05D007623 5.8e-12 75.5 42 83.3
HanXRQChr09g0276431 Helianthus annuus HOM05D006300 ORTHO05D007623 9.9e-12 74.7 53 71.7
Lsat_1_v5_gn_4_95241 Lactuca sativa HOM05D006300 ORTHO05D007623 1.7e-11 73.9 43 83.7
Cc04_g01980 Coffea canephora HOM05D006300 ORTHO05D007623 2.9e-11 73.2 127 45.7
FvH4_6g33270 Fragaria vesca HOM05D006300 ORTHO05D007623 6.4e-11 72.0 64 56.2
FAN14G0371 Fragaria x ananassa HOM05D006300 ORTHO05D007623 6.4e-11 72.0 64 56.2
RcHm_v2.0_Chr2g0142971 Rosa chinensis HOM05D006300 ORTHO05D007623 6.4e-11 72.0 171 36.3
FAN02G1261 Fragaria x ananassa HOM05D006300 ORTHO05D007623 8.4e-11 71.6 64 56.2
TAR383G0464 Trochodendron aralioides HOM05D006300 ORTHO05D007623 1.4e-10 70.9 190 35.8
Hund20857 Selenicereus undatus HOM05D006300 ORTHO05D007623 1.9e-10 70.5 174 39.1
SalBow6G0902 Salvia bowleyana HOM05D006300 ORTHO05D007623 2.4e-10 70.1 159 35.8
Sc15g0000130 Simmondsia chinensis HOM05D006300 ORTHO05D007623 3.2e-10 69.7 154 43.5
FAN05G1138 Fragaria x ananassa HOM05D006300 ORTHO05D007623 4.2e-10 69.3 64 54.7
TPR.G6530 Trifolium pratense HOM05D006300 ORTHO05D007623 4.2e-10 69.3 165 38.8
DCAR_007620 Daucus carota HOM05D006300 ORTHO05D007623 5.4e-10 68.9 123 41.5
Migut.I01022 Erythranthe guttata HOM05D006300 ORTHO05D007623 9.3e-10 68.2 174 32.8
Glyma.15G023900 Glycine max HOM05D006300 ORTHO05D007623 2.1e-09 67.0 52 63.5
Oeu007005.1 Olea europaea HOM05D006300 ORTHO05D007623 3.5e-09 66.2 50 62.0
ECA232G1041 Erigeron canadensis HOM05D000140 ORTHO05D000087 7.9e-09 65.1 45 80.0
Sed0006903 Sechium edule HOM05D006300 ORTHO05D007623 7.9e-09 65.1 136 39.7
VMungo1080G1020 Vigna mungo HOM05D006300 ORTHO05D007623 7.9e-09 65.1 63 54.0
Aa31LG7G2500 Aethionema arabicum HOM05D006300 ORTHO05D007623 1.8e-08 63.9 209 28.7
Aqoxy7G01215 Aquilegia oxysepala HOM05D006300 ORTHO05D007623 1.8e-08 63.9 171 39.8
PSO210G0359 Papaver somniferum HOM05D006300 ORTHO05D007623 1.8e-08 63.9 39 79.5
PSO210G2046 Papaver somniferum HOM05D006300 ORTHO05D007623 1.8e-08 63.9 39 79.5
Phvul.005G159900 Phaseolus vulgaris HOM05D006300 ORTHO05D007623 3.9e-08 62.8 61 54.1
Glyma.13G350600 Glycine max HOM05D006300 ORTHO05D007623 5.1e-08 62.4 54 57.4
arahy.Tifrunner.gnm1.ann1.GTSR33 Arachis hypogaea HOM05D006300 ORTHO05D007623 6.7e-08 62.0 58 53.4
Psat4g199680 Pisum sativum HOM05D006300 ORTHO05D007623 1.1e-07 61.2 56 60.7
MBI04_g34125_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 1.5e-07 60.8 180 31.7
MBI01_g01269_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 3.3e-07 59.7 58 53.4
Ca_28052_v3 Cicer arietinum L. HOM05D006300 ORTHO05D007623 5.6e-07 58.9 49 57.1
Ca_30533_v3 Cicer arietinum L. HOM05D006300 ORTHO05D007623 5.6e-07 58.9 49 57.1
Ciclev10025783m.g Citrus clementina HOM05D006300 ORTHO05D007623 7.4e-07 58.5 185 33.5
TPR.G8429 Trifolium pratense HOM05D006300 ORTHO05D007623 9.6e-07 58.2 62 48.4
Nn8g38867 Nelumbo nucifera HOM05D006300 ORTHO05D007623 2.1e-06 57.0 164 37.2
ATR0026G017 Amborella trichopoda HOM05D006300 ORTHO05D007623 4.8e-06 55.8 56 53.6


User provided reference genes

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