Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc223.13 Carica papaya HOM05D005955 ORTHO05D007633 2.0e-152 542.3 265 100.0
Thecc.10G166400 Theobroma cacao HOM05D005955 ORTHO05D007633 2.2e-114 416.0 262 79.8
TWI63G0596 Tripterygium wilfordii HOM05D005955 ORTHO05D007633 2.2e-111 406.0 237 83.1
Duzib128G0282 Durio zibethinus HOM05D005955 ORTHO05D007633 5.0e-111 404.8 262 78.2
CiPaw.13G012200 Carya illinoinensis HOM05D005955 ORTHO05D007633 1.9e-110 402.9 265 74.3
Haze_03068 Corylus avellana HOM05D005955 ORTHO05D007633 5.5e-110 401.4 261 77.0
GSVIVG01000659001 Vitis vinifera HOM05D005955 ORTHO05D007633 7.2e-110 401.0 252 78.2
Gohir.D04G014500 Gossypium hirsutum HOM05D005955 ORTHO05D007633 2.7e-109 399.1 257 77.8
Manes.11G004000 Manihot esculenta HOM05D005955 ORTHO05D007633 2.3e-108 396.0 254 77.2
TAR369G0753 Trochodendron aralioides HOM05D005955 ORTHO05D007633 6.7e-108 394.4 262 75.2
Potri.001G025601 Populus trichocarpa HOM05D005955 ORTHO05D007633 1.5e-107 393.3 237 81.0
QL04p014297 Quercus lobata HOM05D005955 ORTHO05D007633 3.3e-107 392.1 265 75.1
Actinidia02255 Actinidia chinensis HOM05D005955 ORTHO05D007633 5.7e-107 391.3 258 76.4
Glyma.11G154400 Glycine max HOM05D005955 ORTHO05D007633 7.5e-107 391.0 259 74.9
MD02G1290300 Malus domestica HOM05D005955 ORTHO05D007633 1.3e-106 390.2 264 73.9
Dinv09262 Davidia involucrata HOM05D005955 ORTHO05D007633 3.7e-106 388.7 254 76.8
Gohir.A05G401400 Gossypium hirsutum HOM05D005955 ORTHO05D007633 4.8e-106 388.3 246 79.3
Phvul.005G029600 Phaseolus vulgaris HOM05D005955 ORTHO05D007633 4.8e-106 388.3 247 75.3
THA.LOC104824190 Tarenaya hassleriana HOM05D005955 ORTHO05D007633 4.8e-106 388.3 247 77.7
Ciclev10005678m.g Citrus clementina HOM05D005955 ORTHO05D007633 6.3e-106 387.9 264 74.2
Sabra01G0018900 Salix brachista HOM05D005955 ORTHO05D007633 8.3e-106 387.5 237 79.7
Atru.chr12.1378 Acer truncatum HOM05D005955 ORTHO05D007633 1.4e-105 386.7 259 75.7
Gorai.012G017000 Gossypium raimondii HOM05D005955 ORTHO05D007633 1.8e-105 386.3 284 70.8
Eucgr.G03245 Eucalyptus grandis HOM05D005955 ORTHO05D007633 2.4e-105 386.0 260 76.2
arahy.Tifrunner.gnm1.ann1.RGX0XE Arachis hypogaea HOM05D005955 ORTHO05D007633 9.1e-105 384.0 228 79.8
CSS0025918 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 9.1e-105 384.0 253 76.7
VMungo1080G1708 Vigna mungo HOM05D005955 ORTHO05D007633 1.2e-104 383.6 229 80.8
Cfa010889 Carpinus fangiana HOM05D005955 ORTHO05D007633 4.5e-104 381.7 222 85.1
ClCG05G026720 Citrullus lanatus HOM05D005955 ORTHO05D007633 4.5e-104 381.7 261 72.4
CsaV3_5G036650 Cucumis sativus L. HOM05D005955 ORTHO05D007633 5.9e-104 381.3 261 72.0
Gohir.D04G013700 Gossypium hirsutum HOM05D005955 ORTHO05D007633 7.7e-104 380.9 285 69.5
Lalb_Chr04g0264041 Lupinus albus HOM05D005955 ORTHO05D007633 1.7e-103 379.8 256 74.6
Rhsim01G0123700 Rhododendron simsii HOM05D005955 ORTHO05D007633 1.7e-103 379.8 257 75.1
Sopen11g001560 Solanum pennellii HOM05D005955 ORTHO05D007633 2.9e-103 379.0 254 72.8
Hma1.2p1_1251F.1_g270440 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 3.8e-103 378.6 255 76.1
Prupe.2G032200 Prunus persica HOM05D005955 ORTHO05D007633 3.8e-103 378.6 264 72.7
Aqoxy2G00337 Aquilegia oxysepala HOM05D005955 ORTHO05D007633 6.5e-103 377.9 237 78.1
Medtr3g017610 Medicago truncatula HOM05D005955 ORTHO05D007633 8.5e-103 377.5 234 78.2
vmacro12691 Vaccinium macrocarpon HOM05D005955 ORTHO05D007633 1.9e-102 376.3 231 80.5
Psat5g219280 Pisum sativum HOM05D005955 ORTHO05D007633 2.5e-102 375.9 254 73.6
Solyc11g005590.1 Solanum lycopersicum HOM05D005955 ORTHO05D007633 3.2e-102 375.6 254 72.0
Aa31sc434G20 Aethionema arabicum HOM05D005955 ORTHO05D007633 4.2e-102 375.2 271 69.4
RcHm_v2.0_Chr1g0322011 Rosa chinensis HOM05D005955 ORTHO05D007633 4.2e-102 375.2 260 74.2
FvH4_7g02750 Fragaria vesca HOM05D005955 ORTHO05D007633 5.5e-102 374.8 257 73.5
FAN06G1602 Fragaria x ananassa HOM05D005955 ORTHO05D007633 5.5e-102 374.8 257 73.5
BcaB02g08444 Brassica carinata HOM05D005955 ORTHO05D007633 9.4e-102 374.0 244 75.4
Ca_27127_v3 Cicer arietinum L. HOM05D005955 ORTHO05D007633 9.4e-102 374.0 262 71.4
FAN10G0293 Fragaria x ananassa HOM05D005955 ORTHO05D007633 9.4e-102 374.0 260 72.7
Sp5g07940 Schrenkiella parvula HOM05D005955 ORTHO05D007633 9.4e-102 374.0 258 72.5
PGSC0003DMG401003979 Solanum tuberosum HOM05D005955 ORTHO05D007633 9.4e-102 374.0 254 72.0
AL5G35530 Arabidopsis lyrata HOM05D005955 ORTHO05D007633 3.6e-101 372.1 245 75.1
Thhalv10010628m.g Eutrema salsugineum HOM05D005955 ORTHO05D007633 4.0e-100 368.6 241 74.7
A04p05350 Brassica napus HOM05D005955 ORTHO05D007633 6.8e-100 367.9 246 74.0
FAN03G1179 Fragaria x ananassa HOM05D005955 ORTHO05D007633 8.8e-100 367.5 256 72.7
CANSAT56G4499 Cannabis sativa HOM05D005955 ORTHO05D007633 1.2e-99 367.1 231 79.2
Carub.0005s2110 Capsella rubella HOM05D005955 ORTHO05D007633 1.2e-99 367.1 242 75.2
Sed0001833 Sechium edule HOM05D005955 ORTHO05D007633 2.0e-99 366.3 233 76.0
BraA04t16235Z Brassica rapa HOM05D005955 ORTHO05D007633 4.4e-99 365.2 245 73.9
Cc02_g29700 Coffea canephora HOM05D005955 ORTHO05D007633 4.4e-99 365.2 259 69.9
Peaxi162Scf01732g00026 Petunia axillaris HOM05D005955 ORTHO05D007633 4.4e-99 365.2 255 72.2
MBI13_g36285_MAGBIO Magnolia biondii HOM05D005955 ORTHO05D007633 7.5e-99 364.4 243 72.8
AT3G54480 Arabidopsis thaliana HOM05D005955 ORTHO05D007633 9.8e-99 364.0 245 73.1
ECA248G0357 Erigeron canadensis HOM05D005955 ORTHO05D007633 2.2e-98 362.8 250 72.4
Nitab4.5_0001681g0050 Nicotiana tabacum HOM05D005955 ORTHO05D007633 2.2e-98 362.8 254 70.5
BcaB01g00190 Brassica carinata HOM05D005955 ORTHO05D007633 3.7e-98 362.1 259 71.4
EL10Ac2g02824 Beta vulgaris HOM05D005955 ORTHO05D007633 4.8e-98 361.7 265 69.4
A09p47410 Brassica napus HOM05D005955 ORTHO05D007633 4.8e-98 361.7 245 73.1
C08p29670 Brassica napus HOM05D005955 ORTHO05D007633 1.4e-97 360.1 245 73.5
BolC8t50576H Brassica oleracea HOM05D005955 ORTHO05D007633 1.4e-97 360.1 245 73.5
PGR031G3892 Punica granatum HOM05D005955 ORTHO05D007633 3.1e-97 359.0 246 72.8
BcaC02g09066 Brassica carinata HOM05D005955 ORTHO05D007633 4.1e-97 358.6 250 71.2
C04p38040 Brassica napus HOM05D005955 ORTHO05D007633 4.1e-97 358.6 250 71.2
HanXRQChr11g0341831 Helianthus annuus HOM05D005955 ORTHO05D007633 9.1e-97 357.5 237 74.3
MSTRG.5061 Avicennia marina HOM05D005955 ORTHO05D007633 1.6e-96 356.7 257 70.0
AUR62026845 Chenopodium quinoa HOM05D005955 ORTHO05D007633 4.5e-96 355.1 239 72.4
TPR.G17810 Trifolium pratense HOM05D005955 ORTHO05D007633 4.5e-96 355.1 275 66.2
PSO339G4535 Papaver somniferum HOM05D005955 ORTHO05D007633 5.9e-96 354.8 266 68.0
SGA_v2.0_scaffold232G43514 Striga asiatica HOM05D005955 ORTHO05D007633 7.7e-96 354.4 231 75.3
Migut.N01830 Erythranthe guttata HOM05D005955 ORTHO05D007633 2.3e-95 352.8 252 71.0
COL.COLO4_21458 Corchorus olitorius HOM05D005955 ORTHO05D007633 5.0e-95 351.7 208 82.2
Migut.O00720 Erythranthe guttata HOM05D005955 ORTHO05D007633 1.1e-94 350.5 252 70.6
unitig_8.g4774 Utricularia gibba HOM05D005955 ORTHO05D007633 1.1e-94 350.5 229 73.4
PSO384G0859 Papaver somniferum HOM05D005955 ORTHO05D007633 2.5e-94 349.4 233 73.8
Lj3g0013196 Lotus japonicus HOM05D005955 ORTHO05D007633 1.6e-93 346.7 230 73.9
Hund15721 Selenicereus undatus HOM05D005955 ORTHO05D007633 3.0e-92 342.4 336 56.5
HPP92_025011 Vanilla planifolia HOM05D005955 ORTHO05D007633 3.0e-92 342.4 253 67.6
CSS0041352 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 4.4e-91 338.6 209 81.3
Nitab4.5_0000320g0120 Nicotiana tabacum HOM05D005955 ORTHO05D007633 1.3e-90 337.0 322 56.2
ATR0075G002 Amborella trichopoda HOM05D005955 ORTHO05D007633 2.8e-90 335.9 237 68.8
DCAR_031830 Daucus carota HOM05D005955 ORTHO05D007633 6.3e-90 334.7 210 77.6
Sc10g0004360 Simmondsia chinensis HOM05D005955 ORTHO05D007633 1.1e-89 334.0 213 75.6
Lsat_1_v5_gn_1_114801 Lactuca sativa HOM05D005955 ORTHO05D007633 3.1e-89 332.4 242 68.6
MELO3C012462.2 Cucumis melo HOM05D005955 ORTHO05D007633 1.6e-88 330.1 218 73.9
Zm00001eb329830 Zea mays HOM05D005955 ORTHO05D007633 2.7e-88 329.3 227 68.3
Ah.10g030640 Amaranthus hybridus HOM05D000390 ORTHO05D000577 1.0e-87 327.4 259 65.3
CAN.G476.5 Capsicum annuum HOM05D005955 ORTHO05D007633 1.0e-87 327.4 208 76.4
Oeu015683.2 Olea europaea HOM05D005955 ORTHO05D007633 6.6e-87 324.7 211 77.3
Lj7A580T60 Lonicera japonica HOM05D005955 ORTHO05D007633 3.3e-86 322.4 213 75.6
Nn2g14899 Nelumbo nucifera HOM05D005955 ORTHO05D007633 2.3e-84 316.2 202 77.2
Hma1.2p1_1251F.1_g270450 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 6.8e-84 314.7 198 80.8
arahy.Tifrunner.gnm1.ann1.NJCB22 Arachis hypogaea HOM05D005955 ORTHO05D007633 1.5e-75 287.0 304 53.3
Os07g0659700 Oryza sativa ssp. japonica HOM05D005955 ORTHO05D007633 9.8e-75 284.3 197 70.1
SEGI_28535 Sequoiadendron giganteum HOM05D005955 ORTHO05D007633 1.7e-74 283.5 223 62.3
Atru.chr12.1174 Acer truncatum HOM05D005955 ORTHO05D007633 5.4e-73 278.5 174 78.7
Dinv09283 Davidia involucrata HOM05D005955 ORTHO05D007633 1.1e-70 270.8 167 82.0
AagrBONN_evm.TU.Sc2ySwM_344.4523 Anthoceros agrestis HOM05D005955 ORTHO05D007633 8.1e-69 264.6 238 53.4
SMO172G0212 Selaginella moellendorffii HOM05D005955 ORTHO05D007633 9.9e-67 257.7 240 53.3
Pp3c5_2560 Physcomitrium patens HOM05D005955 ORTHO05D007633 1.1e-62 244.2 224 55.4
CBR_g30624 Chara braunii HOM05D005955 ORTHO05D007633 1.2e-56 224.2 234 50.0
CDE12G0962 Ceratophyllum demersum HOM05D005955 ORTHO05D007633 2.7e-56 223.0 138 76.8
Manes.08G167250 Manihot esculenta HOM05D005955 ORTHO05D007633 3.9e-55 219.2 133 81.2
BolC8t50572H Brassica oleracea HOM05D005955 ORTHO05D007633 1.6e-48 197.2 146 69.2
BraA09t40201Z Brassica rapa HOM05D005955 ORTHO05D007633 1.6e-48 197.2 146 68.5
AUR62037202 Chenopodium quinoa HOM05D005955 ORTHO05D007633 2.7e-48 196.4 137 70.8
BolC8t50570H Brassica oleracea HOM05D005955 ORTHO05D007633 7.8e-48 194.9 146 68.5
Ciclev10002701m.g Citrus clementina HOM05D005955 ORTHO05D007633 6.2e-45 185.3 175 56.0
Manes.11G001251 Manihot esculenta HOM05D005955 ORTHO05D007633 3.1e-44 183.0 114 79.8
AUR62037203 Chenopodium quinoa HOM05D005955 ORTHO05D007633 7.9e-40 168.3 122 66.4
CARHR164380 Cardamine hirsuta HOM05D005955 ORTHO05D007633 1.8e-39 167.2 123 68.3
Psat7g193960 Pisum sativum HOM05D005955 ORTHO05D007633 2.4e-36 156.8 96 80.2
C08p29620 Brassica napus HOM05D005955 ORTHO05D007633 9.3e-33 144.8 103 70.9
CANSAT01G1797 Cannabis sativa HOM05D005955 ORTHO05D007633 7.9e-32 141.7 95 75.8
Nn8g40481 Nelumbo nucifera HOM05D005955 ORTHO05D007633 1.6e-24 117.5 78 67.9
Migut.N01795 Erythranthe guttata HOM05D005955 ORTHO05D007633 3.9e-23 112.8 117 53.8
TPR.G7208 Trifolium pratense HOM05D005955 ORTHO05D007633 7.9e-16 88.6 47 83.0
PRCOL_00001745 Prasinoderma coloniale HOM05D005955 ORTHO05D007633 6.7e-15 85.5 272 26.8
BcaC08g45413 Brassica carinata HOM05D005955 ORTHO05D007633 3.1e-12 76.6 114 44.7
BcaB05g22681 Brassica carinata HOM05D005955 ORTHO05D007633 2.6e-11 73.6 114 43.9


User provided reference genes

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