Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc216.18 Carica papaya HOM05D005643 ORTHO05D006819 9.0e-37 156.4 77 100.0
Atru.chr3.3643 Acer truncatum HOM05D005643 ORTHO05D006819 5.7e-23 110.5 76 71.1
Sabra09G0008500 Salix brachista HOM05D005643 ORTHO05D006819 3.7e-22 107.8 76 71.1
Ciclev10029093m.g Citrus clementina HOM05D005643 ORTHO05D006819 1.8e-21 105.5 82 65.9
Potri.009G012700 Populus trichocarpa HOM05D005643 ORTHO05D006819 1.5e-20 102.4 77 71.4
TWI79G0673 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 1.5e-20 102.4 76 72.4
Gohir.A05G074000 Gossypium hirsutum HOM05D005643 ORTHO05D006819 2.0e-20 102.1 76 64.5
Gohir.D05G076900 Gossypium hirsutum HOM05D005643 ORTHO05D006819 2.0e-20 102.1 76 64.5
Gorai.009G078300 Gossypium raimondii HOM05D005643 ORTHO05D006819 2.0e-20 102.1 76 64.5
Manes.04G022200 Manihot esculenta HOM05D005643 ORTHO05D006819 2.0e-20 102.1 76 71.1
GSVIVG01025172001 Vitis vinifera HOM05D005643 ORTHO05D006819 5.9e-20 100.5 76 69.7
Thecc.09G257100 Theobroma cacao HOM05D005643 ORTHO05D006819 7.6e-20 100.1 76 65.8
CiPaw.13G111900 Carya illinoinensis HOM05D005643 ORTHO05D006819 1.0e-19 99.8 76 68.4
Carub.0008s2123 Capsella rubella HOM05D005643 ORTHO05D006819 3.8e-19 97.8 78 64.1
CiPaw.13G111500 Carya illinoinensis HOM05D005643 ORTHO05D006819 5.0e-19 97.4 76 67.1
THA.LOC104814830 Tarenaya hassleriana HOM05D005643 ORTHO05D006819 5.0e-19 97.4 78 66.7
PGR102G1730 Punica granatum HOM05D005643 ORTHO05D006819 1.9e-18 95.5 71 67.6
AT5G60540 Arabidopsis thaliana HOM05D005643 ORTHO05D006819 3.2e-18 94.7 78 62.8
TWI75G1433 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 3.2e-18 94.7 76 63.2
Prupe.6G100100 Prunus persica HOM05D005643 ORTHO05D006819 4.2e-18 94.4 76 67.1
AL8G37130 Arabidopsis lyrata HOM05D005643 ORTHO05D006819 7.2e-18 93.6 78 62.8
Eucgr.B02489 Eucalyptus grandis HOM05D005643 ORTHO05D006819 9.3e-18 93.2 76 64.5
Dinv12496 Davidia involucrata HOM05D005643 ORTHO05D006819 1.2e-17 92.8 76 65.8
Dinv32759 Davidia involucrata HOM05D005643 ORTHO05D006819 1.2e-17 92.8 76 65.8
Rhsim13G0093700 Rhododendron simsii HOM05D005643 ORTHO05D006819 2.1e-17 92.0 64 73.4
Glyma.01G116100 Glycine max HOM05D005643 ORTHO05D006819 2.7e-17 91.7 79 60.8
BcaB08g36348 Brassica carinata HOM05D005643 ORTHO05D006819 3.6e-17 91.3 78 59.0
Duzib150G0959 Durio zibethinus HOM05D005643 ORTHO05D006819 3.6e-17 91.3 67 71.6
MBI07_g41453_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 3.6e-17 91.3 77 66.2
Actinidia03737 Actinidia chinensis HOM05D005643 ORTHO05D006819 4.6e-17 90.9 70 67.1
Glyma.03G060100 Glycine max HOM05D005643 ORTHO05D006819 4.6e-17 90.9 76 59.2
Sp6g22110 Schrenkiella parvula HOM05D005643 ORTHO05D006819 4.6e-17 90.9 77 62.3
A10p17720 Brassica napus HOM05D005643 ORTHO05D006819 6.1e-17 90.5 65 67.7
BraA10t43851Z Brassica rapa HOM05D005643 ORTHO05D006819 6.1e-17 90.5 65 67.7
QL01p022418 Quercus lobata HOM05D005643 ORTHO05D006819 7.9e-17 90.1 69 68.1
MD11G1133800 Malus domestica HOM05D005643 ORTHO05D006819 1.0e-16 89.7 68 70.6
BcaB08g36349 Brassica carinata HOM05D005643 ORTHO05D006819 1.3e-16 89.4 78 59.0
BcaC04g19711 Brassica carinata HOM05D005643 ORTHO05D006819 1.3e-16 89.4 78 59.0
C09p53180 Brassica napus HOM05D005643 ORTHO05D006819 1.3e-16 89.4 78 59.0
BolC9t58193H Brassica oleracea HOM05D005643 ORTHO05D006819 1.3e-16 89.4 78 59.0
MBI07_g42630_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 1.3e-16 89.4 74 67.6
PSO339G3071 Papaver somniferum HOM05D005643 ORTHO05D006819 1.3e-16 89.4 75 57.3
RcHm_v2.0_Chr5g0059641 Rosa chinensis HOM05D005643 ORTHO05D006819 1.3e-16 89.4 74 63.5
FvH4_3g32570 Fragaria vesca HOM05D005643 ORTHO05D006819 1.8e-16 89.0 74 64.9
FAN11G2689 Fragaria x ananassa HOM05D005643 ORTHO05D006819 1.8e-16 89.0 74 64.9
PSO384G4957 Papaver somniferum HOM05D005643 ORTHO05D006819 1.8e-16 89.0 75 57.3
Phvul.010G001900 Phaseolus vulgaris HOM05D005643 ORTHO05D006819 1.8e-16 89.0 79 60.8
DCAR_006056 Daucus carota HOM05D005643 ORTHO05D006819 2.3e-16 88.6 76 59.2
Lj1A190T89 Lonicera japonica HOM05D005643 ORTHO05D006819 2.3e-16 88.6 76 60.5
TAR633G1751 Trochodendron aralioides HOM05D005643 ORTHO05D006819 2.3e-16 88.6 69 66.7
Haze_23864 Corylus avellana HOM05D005643 ORTHO05D006819 3.0e-16 88.2 71 66.2
Duzib170G0435 Durio zibethinus HOM05D005643 ORTHO05D006819 3.0e-16 88.2 65 66.2
Duzib170G0739 Durio zibethinus HOM05D005643 ORTHO05D006819 3.0e-16 88.2 65 66.2
FAN16G3648 Fragaria x ananassa HOM05D005643 ORTHO05D006819 3.0e-16 88.2 74 64.9
FAN21G1883 Fragaria x ananassa HOM05D005643 ORTHO05D006819 3.0e-16 88.2 74 64.9
VMungo0331G1810 Vigna mungo HOM05D005643 ORTHO05D006819 3.0e-16 88.2 79 59.5
C02p11600 Brassica napus HOM05D005643 ORTHO05D006819 3.9e-16 87.8 78 59.0
BolC2t07247H Brassica oleracea HOM05D005643 ORTHO05D006819 3.9e-16 87.8 78 57.7
Hma1.2p1_1030F.1_g249820 Hydrangea macrophylla HOM05D005643 ORTHO05D006819 3.9e-16 87.8 74 62.2
TAR636G0837 Trochodendron aralioides HOM05D005643 ORTHO05D006819 6.7e-16 87.0 71 63.4
Cfa011331 Carpinus fangiana HOM05D005643 ORTHO05D006819 8.7e-16 86.7 71 64.8
Thhalv10014160m.g Eutrema salsugineum HOM05D005643 ORTHO05D006819 8.7e-16 86.7 70 61.4
Nitab4.5_0006757g0010 Nicotiana tabacum HOM05D005643 ORTHO05D006819 8.7e-16 86.7 76 59.2
arahy.Tifrunner.gnm1.ann1.X5NJ7E Arachis hypogaea HOM05D005643 ORTHO05D006819 1.5e-15 85.9 77 59.7
CSS0039600 Camellia sinensis var. sinensis HOM05D005643 ORTHO05D006819 1.5e-15 85.9 71 67.6
Peaxi162Scf00270g00108 Petunia axillaris HOM05D005643 ORTHO05D006819 1.9e-15 85.5 76 59.2
Sc06g0010070 Simmondsia chinensis HOM05D005643 ORTHO05D006819 1.9e-15 85.5 69 66.7
Ca_09130_v3 Cicer arietinum L. HOM05D005643 ORTHO05D006819 2.5e-15 85.1 79 59.5
Lj3g0018588 Lotus japonicus HOM05D005643 ORTHO05D006819 2.5e-15 85.1 74 59.5
Lalb_Chr03g0043331 Lupinus albus HOM05D005643 ORTHO05D006819 2.5e-15 85.1 77 59.7
Oeu059095.1 Olea europaea HOM05D005643 ORTHO05D006819 2.5e-15 85.1 54 75.9
CARHR274200 Cardamine hirsuta HOM05D005643 ORTHO05D006819 3.3e-15 84.7 78 57.7
Migut.D02214 Erythranthe guttata HOM05D005643 ORTHO05D006819 3.3e-15 84.7 73 61.6
Lj2A1030T58 Lonicera japonica HOM05D005643 ORTHO05D006819 3.3e-15 84.7 70 65.7
vmacro03191 Vaccinium macrocarpon HOM05D005643 ORTHO05D006819 3.3e-15 84.7 64 68.8
Migut.D02210 Erythranthe guttata HOM05D005643 ORTHO05D006819 4.3e-15 84.3 73 61.6
SalBow5G2340 Salvia bowleyana HOM05D005643 ORTHO05D006819 5.7e-15 84.0 74 60.8
TPR.G13337 Trifolium pratense HOM05D005643 ORTHO05D006819 5.7e-15 84.0 78 60.3
MSTRG.21131 Avicennia marina HOM05D005643 ORTHO05D006819 7.4e-15 83.6 52 76.9
CAN.G1001.26 Capsicum annuum HOM05D005643 ORTHO05D006819 7.4e-15 83.6 71 64.8
Cc01_g11250 Coffea canephora HOM05D005643 ORTHO05D006819 7.4e-15 83.6 76 57.9
Nitab4.5_0000650g0110 Nicotiana tabacum HOM05D005643 ORTHO05D006819 9.7e-15 83.2 71 60.6
SGA_v2.0_scaffold97G29210 Striga asiatica HOM05D005643 ORTHO05D006819 9.7e-15 83.2 69 60.9
arahy.Tifrunner.gnm1.ann1.QSC7KM Arachis hypogaea HOM05D005643 ORTHO05D006819 1.3e-14 82.8 77 58.4
Sed0015117 Sechium edule HOM05D005643 ORTHO05D006819 1.3e-14 82.8 69 60.9
Lalb_Chr19g0124481 Lupinus albus HOM05D005643 ORTHO05D006819 1.6e-14 82.4 77 58.4
Medtr4g015590 Medicago truncatula HOM05D005643 ORTHO05D006819 1.6e-14 82.4 77 57.1
Oeu002854.1 Olea europaea HOM05D005643 ORTHO05D006819 1.6e-14 82.4 54 74.1
Oeu002855.1 Olea europaea HOM05D005643 ORTHO05D006819 1.6e-14 82.4 54 74.1
ATR0115G033 Amborella trichopoda HOM05D005643 ORTHO05D006819 2.8e-14 81.6 47 80.9
Nn2g10757 Nelumbo nucifera HOM05D005643 ORTHO05D006819 6.3e-14 80.5 69 60.9
Aa31LG1G12530 Aethionema arabicum HOM05D005643 ORTHO05D006819 8.2e-14 80.1 52 71.2
PGSC0003DMG400008060 Solanum tuberosum HOM05D005643 ORTHO05D006819 1.4e-13 79.3 70 60.0
Aqoxy1G03172 Aquilegia oxysepala HOM05D005643 ORTHO05D006819 2.4e-13 78.6 75 60.0
Psat7g245880 Pisum sativum HOM05D005643 ORTHO05D006819 2.4e-13 78.6 77 55.8
Solyc11g069290.2 Solanum lycopersicum HOM05D005643 ORTHO05D006819 3.1e-13 78.2 70 60.0
Sopen11g028020 Solanum pennellii HOM05D005643 ORTHO05D006819 3.1e-13 78.2 70 60.0
CAN.G631.16 Capsicum annuum HOM05D005643 ORTHO05D006819 4.1e-13 77.8 70 61.4
Lsat_1_v5_gn_1_65480 Lactuca sativa HOM05D005643 ORTHO05D006819 4.1e-13 77.8 70 57.1
SMO364G0700 Selaginella moellendorffii HOM05D005643 ORTHO05D006819 9.1e-13 76.6 68 55.9
unitig_0.g1517 Utricularia gibba HOM05D005643 ORTHO05D006819 1.2e-12 76.3 68 55.9
MELO3C025766.2 Cucumis melo HOM05D005643 ORTHO05D006819 2.6e-12 75.1 69 59.4
ECA248G1947 Erigeron canadensis HOM05D005643 ORTHO05D006819 3.4e-12 74.7 74 54.1
CsaV3_6G013840 Cucumis sativus L. HOM05D005643 ORTHO05D006819 4.5e-12 74.3 67 58.2
HanXRQChr01g0018371 Helianthus annuus HOM05D005643 ORTHO05D006819 1.0e-11 73.2 71 53.5
AUR62024993 Chenopodium quinoa HOM05D005643 ORTHO05D006819 1.3e-11 72.8 74 51.4
AUR62039626 Chenopodium quinoa HOM05D005643 ORTHO05D006819 1.3e-11 72.8 74 51.4
MD03G1113000 Malus domestica HOM05D005643 ORTHO05D006819 1.3e-11 72.8 58 60.3
arahy.Tifrunner.gnm1.ann1.9U2L6D Arachis hypogaea HOM05D005643 ORTHO05D006819 2.2e-11 72.0 50 66.0
Rhsim13G0093600 Rhododendron simsii HOM05D000699 ORTHO05D000519 2.2e-11 72.0 47 76.6
EL10Ac9g22501 Beta vulgaris HOM05D005643 ORTHO05D006819 6.5e-11 70.5 78 50.0
HPP92_025849 Vanilla planifolia HOM05D005643 ORTHO05D006819 8.5e-11 70.1 39 76.9
Os02g0130100 Oryza sativa ssp. japonica HOM05D005643 ORTHO05D006819 1.9e-10 68.9 77 45.5
AagrBONN_evm.TU.Sc2ySwM_117.2790 Anthoceros agrestis HOM05D005643 ORTHO05D006819 4.2e-10 67.8 47 66.0
SEGI_15740 Sequoiadendron giganteum HOM05D005643 ORTHO05D006819 4.2e-10 67.8 37 78.4
Mapoly0081s0077 Marchantia polymorpha HOM05D005643 ORTHO05D006819 1.2e-09 66.2 39 76.9
TAR005G0002 Trochodendron aralioides HOM05D005643 ORTHO05D006819 2.1e-09 65.5 67 52.2
Pp3c19_5510 Physcomitrium patens HOM05D005643 ORTHO05D006819 3.6e-09 64.7 44 70.5
Pp3c18_20140 Physcomitrium patens HOM05D005643 ORTHO05D006819 4.6e-09 64.3 48 60.4
SHI06096 Sapria himalayana HOM05D005643 ORTHO05D006819 1.8e-08 62.4 35 80.0
CBR_g31179 Chara braunii HOM05D005643 ORTHO05D006819 3.3e-07 58.2 33 75.8
MCO05G014 Micromonas commoda HOM05D005643 ORTHO05D006819 2.2e-06 55.5 37 59.5


User provided reference genes

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