Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc215.8 Carica papaya HOM05D001104 ORTHO05D006624 6.1e-252 873.6 424 100.0
Atru.chr6.2305 Acer truncatum HOM05D001104 ORTHO05D006624 3.6e-228 794.7 424 88.0
CsaV3_5G027380 Cucumis sativus L. HOM05D001104 ORTHO05D006624 3.0e-227 791.6 426 87.1
Haze_14675 Corylus avellana HOM05D001104 ORTHO05D006624 1.2e-226 789.6 422 87.7
TWI12G0063 Tripterygium wilfordii HOM05D001104 ORTHO05D006624 2.0e-226 788.9 424 86.6
Dinv35069 Davidia involucrata HOM05D001104 ORTHO05D006624 1.3e-225 786.2 426 86.9
Potri.001G348700 Populus trichocarpa HOM05D001104 ORTHO05D006624 1.7e-225 785.8 424 87.0
MELO3C021546.2 Cucumis melo HOM05D001104 ORTHO05D006624 1.4e-224 782.7 426 85.9
Prupe.3G285400 Prunus persica HOM05D001104 ORTHO05D006624 4.1e-224 781.2 433 84.3
Ciclev10015353m.g Citrus clementina HOM05D001104 ORTHO05D006624 9.1e-224 780.0 424 85.8
Sed0005946 Sechium edule HOM05D001104 ORTHO05D006624 9.1e-224 780.0 424 85.4
Dinv33487 Davidia involucrata HOM05D001104 ORTHO05D006624 1.7e-222 775.8 424 85.8
CiPaw.03G038600 Carya illinoinensis HOM05D001104 ORTHO05D006624 1.2e-220 769.6 424 84.7
CSS0039746 Camellia sinensis var. sinensis HOM05D001104 ORTHO05D006624 1.6e-220 769.2 426 84.3
Thecc.04G010000 Theobroma cacao HOM05D001104 ORTHO05D006624 3.6e-220 768.1 424 84.4
Hma1.2p1_0993F.1_g245480 Hydrangea macrophylla HOM05D001104 ORTHO05D006624 1.8e-219 765.8 426 84.3
MD17G1034200 Malus domestica HOM05D001104 ORTHO05D006624 4.4e-218 761.1 445 79.3
CSS0024274 Camellia sinensis var. sinensis HOM05D001104 ORTHO05D006624 5.7e-218 760.8 430 83.3
Rhsim10G0021500 Rhododendron simsii HOM05D001104 ORTHO05D006624 9.8e-218 760.0 418 85.2
Duzib147G0036 Durio zibethinus HOM05D001104 ORTHO05D006624 4.1e-216 754.6 423 82.0
Actinidia06020 Actinidia chinensis HOM05D001104 ORTHO05D006624 5.4e-216 754.2 419 84.5
Oeu062922.1 Olea europaea HOM05D001104 ORTHO05D006624 9.2e-216 753.4 426 81.9
Cc07_g02180 Coffea canephora HOM05D001104 ORTHO05D006624 5.9e-215 750.7 426 83.1
Actinidia35743 Actinidia chinensis HOM05D001104 ORTHO05D006624 6.6e-214 747.3 425 82.6
Nitab4.5_0001709g0040 Nicotiana tabacum HOM05D001104 ORTHO05D006624 2.1e-212 742.3 426 80.8
MSTRG.15512 Avicennia marina HOM05D001104 ORTHO05D006624 2.8e-212 741.9 417 81.8
Solyc02g067740.4 Solanum lycopersicum HOM05D001104 ORTHO05D006624 2.3e-211 738.8 427 81.0
TAR374G1405 Trochodendron aralioides HOM05D001104 ORTHO05D006624 2.3e-211 738.8 424 80.4
ClCG09G018970 Citrullus lanatus HOM05D001104 ORTHO05D006624 2.6e-210 735.3 476 74.2
CAN.G973.9 Capsicum annuum HOM05D001104 ORTHO05D006624 4.4e-210 734.6 426 81.0
Sopen02g016860 Solanum pennellii HOM05D001104 ORTHO05D006624 4.4e-210 734.6 427 80.6
Eucgr.I01793 Eucalyptus grandis HOM05D001104 ORTHO05D006624 2.2e-209 732.3 427 81.5
PGSC0003DMG400006955 Solanum tuberosum HOM05D001104 ORTHO05D006624 2.2e-209 732.3 427 80.8
Gorai.001G262300 Gossypium raimondii HOM05D001104 ORTHO05D006624 4.9e-209 731.1 424 79.7
GSVIVG01032469001 Vitis vinifera HOM05D001104 ORTHO05D006624 4.9e-209 731.1 424 80.4
Gohir.A07G220700 Gossypium hirsutum HOM05D001104 ORTHO05D006624 1.1e-208 729.9 424 79.5
Migut.H00115 Erythranthe guttata HOM05D001104 ORTHO05D006624 5.4e-208 727.6 427 79.9
Cfa007422 Carpinus fangiana HOM05D001104 ORTHO05D006624 3.5e-207 724.9 388 87.9
COL.COLO4_28978 Corchorus olitorius HOM05D001104 ORTHO05D006624 4.6e-207 724.5 448 78.1
RcHm_v2.0_Chr2g0171701 Rosa chinensis HOM05D001104 ORTHO05D006624 3.9e-206 721.5 439 77.2
CANSAT64G0855 Cannabis sativa HOM05D001104 ORTHO05D006624 8.6e-206 720.3 424 78.8
vmacro05831 Vaccinium macrocarpon HOM05D001104 ORTHO05D006624 8.0e-204 713.8 426 79.8
QL02p076349 Quercus lobata HOM05D001104 ORTHO05D006624 5.2e-203 711.1 418 80.4
MD09G1032600 Malus domestica HOM05D001104 ORTHO05D006624 3.4e-202 708.4 446 75.6
Lj7C592G4 Lonicera japonica HOM05D001104 ORTHO05D006624 4.9e-201 704.5 426 78.2
Nn4g22776 Nelumbo nucifera HOM05D001104 ORTHO05D006624 6.4e-201 704.1 425 76.7
FAN14G0697 Fragaria x ananassa HOM05D001104 ORTHO05D006624 1.4e-200 703.0 440 75.0
FvH4_6g50760 Fragaria vesca HOM05D001104 ORTHO05D006624 1.9e-200 702.6 440 75.0
FAN05G2035 Fragaria x ananassa HOM05D001104 ORTHO05D006624 3.2e-200 701.8 440 75.0
HanXRQChr14g0450311 Helianthus annuus HOM05D001104 ORTHO05D006624 7.0e-200 700.7 426 76.8
arahy.Tifrunner.gnm1.ann1.PA6DSG Arachis hypogaea HOM05D001104 ORTHO05D006624 3.5e-199 698.4 426 76.8
SalBow1G5303 Salvia bowleyana HOM05D001104 ORTHO05D006624 3.9e-198 694.9 428 76.4
Medtr6g007040 Medicago truncatula HOM05D001104 ORTHO05D006624 6.6e-198 694.1 417 77.9
ECA232G2826 Erigeron canadensis HOM05D001104 ORTHO05D006624 8.6e-198 693.7 422 75.8
Peaxi162Scf00933g00005 Petunia axillaris HOM05D001104 ORTHO05D006624 1.2e-196 689.9 392 81.1
Hma1.2p1_3249F.1_g334430 Hydrangea macrophylla HOM05D001104 ORTHO05D006624 2.8e-196 688.7 394 81.0
THA.LOC104825337 Tarenaya hassleriana HOM05D001104 ORTHO05D006624 4.7e-196 688.0 427 76.3
Glyma.19G007900 Glycine max HOM05D001104 ORTHO05D006624 2.3e-195 685.6 424 76.7
Phvul.004G013700 Phaseolus vulgaris HOM05D001104 ORTHO05D006624 4.0e-195 684.9 417 77.9
ECA238G2799 Erigeron canadensis HOM05D001104 ORTHO05D006624 6.8e-195 684.1 423 74.7
arahy.Tifrunner.gnm1.ann1.S5BZSG Arachis hypogaea HOM05D001104 ORTHO05D006624 2.6e-194 682.2 446 73.1
VMungo0464G0407 Vigna mungo HOM05D001104 ORTHO05D006624 1.3e-193 679.9 417 76.0
PSO478G3469 Papaver somniferum HOM05D001104 ORTHO05D006624 2.2e-193 679.1 428 75.2
PGR142G0881 Punica granatum HOM05D001104 ORTHO05D006624 6.4e-193 677.6 421 76.0
HanXRQChr09g0266171 Helianthus annuus HOM05D001104 ORTHO05D006624 3.2e-192 675.2 412 75.5
Aqoxy3G01030 Aquilegia oxysepala HOM05D001104 ORTHO05D006624 7.1e-192 674.1 428 75.2
Sp2g16980 Schrenkiella parvula HOM05D001104 ORTHO05D006624 2.1e-191 672.5 426 74.9
BcaC06g30950 Brassica carinata HOM05D001104 ORTHO05D006624 1.7e-190 669.5 427 74.7
Gohir.D07G227400 Gossypium hirsutum HOM05D001104 ORTHO05D006624 5.1e-190 667.9 394 78.4
DCAR_011201 Daucus carota HOM05D001104 ORTHO05D006624 2.1e-188 662.5 395 78.0
BcaC06g33770 Brassica carinata HOM05D001104 ORTHO05D006624 3.6e-188 661.8 426 73.7
C07p37130 Brassica napus HOM05D001104 ORTHO05D006624 3.6e-188 661.8 426 73.7
Thhalv10004293m.g Eutrema salsugineum HOM05D001104 ORTHO05D006624 2.4e-187 659.1 425 74.8
Lalb_Chr06g0176011 Lupinus albus HOM05D001104 ORTHO05D006624 4.0e-187 658.3 413 75.1
Ca_04192_v3 Cicer arietinum L. HOM05D001104 ORTHO05D006624 5.2e-187 657.9 416 74.8
Lj2g0012499 Lotus japonicus HOM05D001104 ORTHO05D006624 1.3e-185 653.3 410 74.9
AL5G17430 Arabidopsis lyrata HOM05D001104 ORTHO05D006624 2.3e-182 642.5 426 72.1
PSO017G6424 Papaver somniferum HOM05D001104 ORTHO05D006624 8.7e-182 640.6 428 72.0
Carub.0005s0650 Capsella rubella HOM05D001104 ORTHO05D006624 9.6e-181 637.1 425 71.8
DCAR_015045 Daucus carota HOM05D001104 ORTHO05D006624 9.6e-181 637.1 473 66.4
CARHR149500 Cardamine hirsuta HOM05D001104 ORTHO05D006624 2.8e-180 635.6 430 70.9
AT3G27930 Arabidopsis thaliana HOM05D001104 ORTHO05D006624 8.1e-180 634.0 426 71.8
FAN02G3192 Fragaria x ananassa HOM05D001104 ORTHO05D006624 1.8e-179 632.9 495 63.4
Lsat_1_v5_gn_4_182480 Lactuca sativa HOM05D001104 ORTHO05D006624 6.9e-179 630.9 426 70.9
MBI16_g05636_MAGBIO Magnolia biondii HOM05D001104 ORTHO05D006624 5.4e-176 621.3 394 72.3
SGA_v2.0_scaffold135G34875 Striga asiatica HOM05D001104 ORTHO05D006624 7.1e-176 620.9 370 79.5
Manes.17G117000 Manihot esculenta HOM05D001104 ORTHO05D006624 3.9e-174 615.1 424 71.7
EL10Ac4g08579 Beta vulgaris HOM05D001104 ORTHO05D006624 3.3e-173 612.1 424 69.1
CSS0016338 Camellia sinensis var. sinensis HOM05D001104 ORTHO05D006624 6.2e-172 607.8 456 68.6
Aa31LG2G4840 Aethionema arabicum HOM05D001104 ORTHO05D006285 3.8e-169 598.6 381 74.8
ATR0730G148 Amborella trichopoda HOM05D001104 ORTHO05D006624 3.8e-169 598.6 422 66.1
Sc03g0007930 Simmondsia chinensis HOM05D001104 ORTHO05D006624 5.1e-166 588.2 343 79.9
Os05g0577800 Oryza sativa ssp. japonica HOM05D001104 ORTHO05D006624 1.9e-160 569.7 425 62.8
Oeu043054.1 Olea europaea HOM05D001104 ORTHO05D006285 5.6e-157 558.1 385 69.9
CDE06G1183 Ceratophyllum demersum HOM05D001104 ORTHO05D006624 8.2e-156 554.3 424 63.7
Nitab4.5_0001125g0070 Nicotiana tabacum HOM05D001104 ORTHO05D006624 6.5e-153 544.7 431 63.3
vmacro18250 Vaccinium macrocarpon HOM05D001104 ORTHO05D006624 1.0e-150 537.3 425 63.8
CSS0012459 Camellia sinensis var. sinensis HOM05D001104 ORTHO05D006624 1.8e-150 536.6 435 63.9
HPP92_024321 Vanilla planifolia HOM05D001104 ORTHO05D006285 9.7e-149 530.8 356 69.7
BcaC03g17495 Brassica carinata HOM05D001104 ORTHO05D006624 2.0e-146 523.1 406 64.8
Psat1g057160 Pisum sativum HOM05D001104 ORTHO05D006624 9.7e-141 504.2 302 77.8
unitig_899.g15491 Utricularia gibba HOM05D000928 ORTHO05D001186 9.4e-136 487.6 401 59.1
AUR62029365 Chenopodium quinoa HOM05D001104 ORTHO05D006624 2.5e-128 463.0 426 54.9
Os05g0577900 Oryza sativa ssp. japonica HOM05D001104 ORTHO05D006624 1.4e-126 457.2 420 53.3
A06p40770 Brassica napus HOM05D001104 ORTHO05D006624 2.6e-125 453.0 289 75.4
BolC7t44224H Brassica oleracea HOM05D001104 ORTHO05D006624 5.7e-125 451.8 288 75.0
BraA06t26998Z Brassica rapa HOM05D001104 ORTHO05D006624 7.4e-125 451.4 288 75.3
C02p54520 Brassica napus HOM05D001104 ORTHO05D006624 1.3e-121 440.7 433 54.5
Rhsim08G0054100 Rhododendron simsii HOM05D001104 ORTHO05D006285 2.1e-119 433.3 423 55.6
C02p54570 Brassica napus HOM05D001104 ORTHO05D006624 1.5e-117 427.2 455 51.4
AUR62043218 Chenopodium quinoa HOM05D001104 ORTHO05D006624 1.7e-116 423.7 424 53.3
AagrBONN_evm.TU.Sc2ySwM_340.221 Anthoceros agrestis HOM05D001104 ORTHO05D006624 8.0e-111 404.8 434 48.2
BolC2t11515H Brassica oleracea HOM05D001104 ORTHO05D006624 1.3e-105 387.5 633 38.9
Pp3c25_9610 Physcomitrium patens HOM05D001104 ORTHO05D006624 7.5e-101 371.7 431 47.1
HanXRQChr06g0175561 Helianthus annuus HOM05D001104 ORTHO05D006624 1.7e-97 360.5 300 59.3
Zm00001eb344500 Zea mays HOM05D001104 ORTHO05D006624 6.1e-95 352.1 269 61.3
TPR.G2265 Trifolium pratense HOM05D001104 ORTHO05D006624 2.0e-90 337.0 192 78.1
A02p35680 Brassica napus HOM05D001104 ORTHO05D006624 1.0e-89 334.7 689 33.4
Hund10304 Selenicereus undatus HOM05D001104 ORTHO05D006624 3.9e-89 332.8 265 61.9
BraA02t08571Z Brassica rapa HOM05D001104 ORTHO05D006624 1.0e-65 255.0 541 33.8
BolC2t11520H Brassica oleracea HOM05D001104 ORTHO05D006624 3.6e-63 246.5 331 45.6
Cfa008567 Carpinus fangiana HOM05D001104 ORTHO05D006624 1.1e-59 235.0 161 72.7
Psat0s3401g0080 Pisum sativum HOM05D001104 ORTHO05D006624 9.3e-59 231.9 145 75.2
A06p40780 Brassica napus HOM05D001104 ORTHO05D006624 3.3e-48 196.8 122 72.1
BraA02t08570Z Brassica rapa HOM05D001104 ORTHO05D006624 1.9e-43 181.0 107 73.8
SEGI_13753 Sequoiadendron giganteum HOM05D001104 ORTHO05D006624 5.6e-40 169.5 147 54.4
Oeu043225.1 Olea europaea HOM05D003428 ORTHO05D006624 1.1e-38 165.2 288 37.2
Oeu051906.1 Olea europaea HOM05D003428 ORTHO05D006624 3.1e-38 163.7 288 37.2
Glyma.05G007402 Glycine max HOM05D001104 ORTHO05D006624 9.3e-35 152.1 88 83.0
Psat1g219520 Pisum sativum HOM05D001104 ORTHO05D006624 3.0e-33 147.1 112 65.2
Thecc.04G111800 Theobroma cacao HOM05D001104 ORTHO05D006624 2.1e-26 124.4 85 64.7
Actinidia36089 Actinidia chinensis HOM05D001104 ORTHO05D006624 4.6e-26 123.2 76 76.3
Cfa008566 Carpinus fangiana HOM05D001104 ORTHO05D006624 9.7e-24 115.5 58 91.4
BcaB07g30139 Brassica carinata HOM05D001104 ORTHO05D006624 5.5e-19 99.8 67 74.6
HanXRQChr16g0517041 Helianthus annuus HOM05D001104 ORTHO05D006624 1.1e-16 92.0 73 57.5
Cre08.g358552 Chlamydomonas reinhardtii HOM05D001104 ORTHO05D006624 1.4e-14 85.1 462 23.2
SEGI_37884 Sequoiadendron giganteum HOM05D001104 ORTHO05D006624 4.1e-14 83.6 56 58.9
Sopen07g006450 Solanum pennellii HOM05D001104 ORTHO05D006624 8.0e-10 69.3 43 69.8
TPR.G18830 Trifolium pratense HOM05D001104 ORTHO05D006624 8.0e-10 69.3 44 75.0
SEGI_12261 Sequoiadendron giganteum HOM05D001104 ORTHO05D006624 2.2e-07 61.2 54 55.6


User provided reference genes

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