Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc21.244 Carica papaya HOM05D003469 ORTHO05D004084 1.4e-44 182.6 89 100.0
GSVIVG01036699001 Vitis vinifera HOM05D003469 ORTHO05D004084 9.7e-35 149.8 89 79.8
Haze_14033 Corylus avellana HOM05D003469 ORTHO05D004084 3.7e-34 147.9 88 80.7
CiPaw.03G010300 Carya illinoinensis HOM05D003469 ORTHO05D004084 1.4e-33 146.0 89 78.7
Ca_19034_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 1.8e-33 145.6 89 76.4
Lj1g0005967 Lotus japonicus HOM05D003469 ORTHO05D004084 2.4e-33 145.2 89 77.5
TWI38G1177 Tripterygium wilfordii HOM05D003469 ORTHO05D004084 2.4e-33 145.2 89 76.4
Glyma.12G027700 Glycine max HOM05D003469 ORTHO05D004084 5.3e-33 144.1 89 76.4
TPR.G32330 Trifolium pratense HOM05D003469 ORTHO05D004084 5.3e-33 144.1 89 74.2
VMungo1127G1455 Vigna mungo HOM05D003469 ORTHO05D004084 7.0e-33 143.7 89 76.4
Phvul.011G031000 Phaseolus vulgaris HOM05D003469 ORTHO05D004084 9.1e-33 143.3 89 75.3
Thecc.08G168800 Theobroma cacao HOM05D003469 ORTHO05D004084 9.1e-33 143.3 88 78.4
QL09p054764 Quercus lobata HOM05D003469 ORTHO05D004084 1.2e-32 142.9 92 77.2
Medtr4g079390 Medicago truncatula HOM05D003469 ORTHO05D004084 1.6e-32 142.5 89 74.2
Lj9C162G1 Lonicera japonica HOM05D003469 ORTHO05D004084 2.0e-32 142.1 90 76.7
Peaxi162Scf00818g00323 Petunia axillaris HOM05D003469 ORTHO05D004084 2.0e-32 142.1 89 75.3
Medtr4g074860 Medicago truncatula HOM05D003469 ORTHO05D004084 2.6e-32 141.7 89 74.2
Manes.06G016500 Manihot esculenta HOM05D003469 ORTHO05D004084 3.5e-32 141.4 86 81.4
Glyma.11G102000 Glycine max HOM05D003469 ORTHO05D004084 4.5e-32 141.0 89 75.3
TPR.G38733 Trifolium pratense HOM05D003469 ORTHO05D004084 4.5e-32 141.0 89 71.9
Actinidia21939 Actinidia chinensis HOM05D003469 ORTHO05D004084 7.7e-32 140.2 89 75.3
arahy.Tifrunner.gnm1.ann1.046I3L Arachis hypogaea HOM05D003469 ORTHO05D004084 1.0e-31 139.8 89 77.5
arahy.Tifrunner.gnm1.ann1.M9HC5A Arachis hypogaea HOM05D003469 ORTHO05D004084 1.0e-31 139.8 89 77.5
FAN20G2279 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.0e-31 139.8 89 75.3
Nitab4.5_0002354g0130 Nicotiana tabacum HOM05D003469 ORTHO05D004084 1.0e-31 139.8 89 73.0
TAR628G0771 Trochodendron aralioides HOM05D003469 ORTHO05D004084 1.0e-31 139.8 86 76.7
FAN15G0576 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.7e-31 139.0 89 75.3
RcHm_v2.0_Chr6g0293861 Rosa chinensis HOM05D003469 ORTHO05D004084 1.7e-31 139.0 89 76.4
COL.COLO4_25120 Corchorus olitorius HOM05D003469 ORTHO05D004084 2.2e-31 138.7 86 76.7
Nitab4.5_0003757g0100 Nicotiana tabacum HOM05D003469 ORTHO05D004084 2.2e-31 138.7 89 73.0
CSS0010807 Camellia sinensis var. sinensis HOM05D003469 ORTHO05D004084 2.9e-31 138.3 89 77.5
Duzib235G0325 Durio zibethinus HOM05D003469 ORTHO05D004084 3.8e-31 137.9 86 77.9
FAN27G0386 Fragaria x ananassa HOM05D003469 ORTHO05D004084 3.8e-31 137.9 89 74.2
MBI03_g18641_MAGBIO Magnolia biondii HOM05D003469 ORTHO05D004084 3.8e-31 137.9 87 72.4
PSO170G4646 Papaver somniferum HOM05D003469 ORTHO05D004084 6.5e-31 137.1 89 74.2
SGA_v2.0_scaffold8G04312 Striga asiatica HOM05D003469 ORTHO05D004084 6.5e-31 137.1 85 74.1
Oeu019664.1 Olea europaea HOM05D003469 ORTHO05D004084 8.5e-31 136.7 85 75.3
vmacro00914 Vaccinium macrocarpon HOM05D003469 ORTHO05D004084 8.5e-31 136.7 89 73.0
Dinv28114 Davidia involucrata HOM05D003469 ORTHO05D004084 1.1e-30 136.3 89 73.0
Nn5g27173 Nelumbo nucifera HOM05D003469 ORTHO05D004084 1.5e-30 136.0 86 72.1
Potri.013G128900 Populus trichocarpa HOM05D003469 ORTHO05D004084 1.5e-30 136.0 89 76.4
FvH4_2g25610 Fragaria vesca HOM05D003469 ORTHO05D004084 2.5e-30 135.2 89 74.2
FAN24G3399 Fragaria x ananassa HOM05D003469 ORTHO05D004084 2.5e-30 135.2 89 74.2
TAR633G1289 Trochodendron aralioides HOM05D003469 ORTHO05D004084 3.2e-30 134.8 86 73.3
ECA232G2309 Erigeron canadensis HOM05D003469 ORTHO05D004084 4.2e-30 134.4 89 68.5
ECA232G2749 Erigeron canadensis HOM05D001807 ORTHO05D002044 4.2e-30 134.4 89 68.5
PGSC0003DMG400033134 Solanum tuberosum HOM05D003469 ORTHO05D004084 4.2e-30 134.4 89 71.9
CAN.G14.42 Capsicum annuum HOM05D003469 ORTHO05D004084 5.5e-30 134.0 89 71.9
HanXRQChr09g0266911 Helianthus annuus HOM05D003469 ORTHO05D004084 5.5e-30 134.0 88 68.2
Eucgr.G01221 Eucalyptus grandis HOM05D003469 ORTHO05D004084 7.2e-30 133.7 89 75.3
DCAR_001477 Daucus carota HOM05D003469 ORTHO05D004084 9.4e-30 133.3 80 77.5
HanXRQChr13g0406831 Helianthus annuus HOM05D003469 ORTHO05D004084 1.2e-29 132.9 88 67.0
MSTRG.1003 Avicennia marina HOM05D003469 ORTHO05D004084 1.6e-29 132.5 85 71.8
SalBow7G2370 Salvia bowleyana HOM05D003469 ORTHO05D004084 1.6e-29 132.5 85 75.3
Rhsim12G0000800 Rhododendron simsii HOM05D003469 ORTHO05D004084 2.1e-29 132.1 89 70.8
Lsat_1_v5_gn_4_131841 Lactuca sativa HOM05D003469 ORTHO05D004084 2.7e-29 131.7 89 68.5
MD09G1155000 Malus domestica HOM05D003469 ORTHO05D004084 2.7e-29 131.7 89 69.7
Prupe.8G070000 Prunus persica HOM05D003469 ORTHO05D004084 2.7e-29 131.7 89 70.8
RcHm_v2.0_Chr2g0151071 Rosa chinensis HOM05D003469 ORTHO05D004084 2.7e-29 131.7 89 69.7
Solyc06g063420.4 Solanum lycopersicum HOM05D003469 ORTHO05D004084 2.7e-29 131.7 89 70.8
Sopen06g022880 Solanum pennellii HOM05D003469 ORTHO05D004084 2.7e-29 131.7 89 70.8
Gohir.A12G230000 Gossypium hirsutum HOM05D003469 ORTHO05D004084 6.1e-29 130.6 88 75.0
Gorai.008G247300 Gossypium raimondii HOM05D003469 ORTHO05D004084 6.1e-29 130.6 88 75.0
Aqoxy6G00028 Aquilegia oxysepala HOM05D003469 ORTHO05D004084 8.0e-29 130.2 86 72.1
Carub.0001s1741 Capsella rubella HOM05D003469 ORTHO05D004084 8.0e-29 130.2 89 70.8
Cc00_g11470 Coffea canephora HOM05D003469 ORTHO05D004084 1.0e-28 129.8 89 73.0
FvH4_6g37900 Fragaria vesca HOM05D003469 ORTHO05D004084 1.0e-28 129.8 89 68.5
FAN14G5376 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.0e-28 129.8 89 68.5
Dinv15687 Davidia involucrata HOM05D003469 ORTHO05D004084 1.4e-28 129.4 86 72.1
Lj9C173G0 Lonicera japonica HOM05D003469 ORTHO05D004084 1.4e-28 129.4 81 77.8
Lalb_Chr07g0195581 Lupinus albus HOM05D003469 ORTHO05D004084 1.4e-28 129.4 90 71.1
BcaC05g25689 Brassica carinata HOM05D003469 ORTHO05D004084 1.8e-28 129.0 89 69.7
A06p13570 Brassica napus HOM05D003469 ORTHO05D004084 1.8e-28 129.0 89 69.7
C05p16090 Brassica napus HOM05D003469 ORTHO05D004084 1.8e-28 129.0 89 69.7
BraA06t24509Z Brassica rapa HOM05D003469 ORTHO05D004084 1.8e-28 129.0 89 69.7
FAN02G0848 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.8e-28 129.0 89 68.5
Gohir.D12G231100 Gossypium hirsutum HOM05D003469 ORTHO05D004084 1.8e-28 129.0 88 73.9
BolC5t30309H Brassica oleracea HOM05D003469 ORTHO05D004084 2.3e-28 128.6 89 68.5
MD17G1141100 Malus domestica HOM05D003469 ORTHO05D004084 3.0e-28 128.3 89 66.3
Sp1g15780 Schrenkiella parvula HOM05D003469 ORTHO05D004084 3.0e-28 128.3 89 69.7
Thhalv10006758m.g Eutrema salsugineum HOM05D003469 ORTHO05D004084 4.0e-28 127.9 89 69.7
Peaxi162Scf00015g00107 Petunia axillaris HOM05D003469 ORTHO05D004084 4.0e-28 127.9 89 68.5
AT1G17680 Arabidopsis thaliana HOM05D003469 ORTHO05D004084 5.2e-28 127.5 89 70.8
CANSAT78G0348 Cannabis sativa HOM05D003469 ORTHO05D004084 5.2e-28 127.5 89 71.9
AL1G30030 Arabidopsis lyrata HOM05D003469 ORTHO05D004084 6.7e-28 127.1 89 69.7
CDE05G0531 Ceratophyllum demersum HOM05D003469 ORTHO05D004084 6.7e-28 127.1 86 69.8
Migut.C00329 Erythranthe guttata HOM05D003469 ORTHO05D004084 6.7e-28 127.1 85 71.8
Hund09398 Selenicereus undatus HOM05D003469 ORTHO05D004084 8.8e-28 126.7 89 69.7
EL10Ac5g10861 Beta vulgaris HOM05D003469 ORTHO05D004084 1.5e-27 125.9 89 68.5
C04p00480 Brassica napus HOM05D003469 ORTHO05D004084 1.5e-27 125.9 89 67.4
Lj9A422T76 Lonicera japonica HOM05D003469 ORTHO05D004084 2.0e-27 125.6 88 70.5
Ciclev10019721m.g Citrus clementina HOM05D003469 ORTHO05D004084 2.6e-27 125.2 89 68.5
BcaB07g34024 Brassica carinata HOM05D003469 ORTHO05D004084 4.4e-27 124.4 85 69.4
Aqoxy4G02849 Aquilegia oxysepala HOM05D003469 ORTHO05D004084 5.7e-27 124.0 89 69.7
Atru.chr9.1130 Acer truncatum HOM05D003469 ORTHO05D004084 7.5e-27 123.6 89 65.2
BcaC02g11929 Brassica carinata HOM05D003469 ORTHO05D004084 7.5e-27 123.6 89 67.4
THA.LOC104800339 Tarenaya hassleriana HOM05D003469 ORTHO05D004084 7.5e-27 123.6 89 68.5
FAN09G4617 Fragaria x ananassa HOM05D003469 ORTHO05D004084 9.7e-27 123.2 89 66.3
THA.LOC104807542 Tarenaya hassleriana HOM05D003469 ORTHO05D004084 1.7e-26 122.5 89 68.5
Os11g0266800 Oryza sativa ssp. japonica HOM05D003469 ORTHO05D004084 2.2e-26 122.1 90 67.8
Rhsim02G0229800 Rhododendron simsii HOM05D000151 ORTHO05D000074 3.7e-26 121.3 80 72.5
Nitab4.5_0002906g0070 Nicotiana tabacum HOM05D003469 ORTHO05D004084 4.8e-26 120.9 82 72.0
C04p09790 Brassica napus HOM05D003469 ORTHO05D004084 6.3e-26 120.6 89 66.3
BolC4t22588H Brassica oleracea HOM05D003469 ORTHO05D004084 6.3e-26 120.6 89 66.3
RcHm_v2.0_Chr2g0151101 Rosa chinensis HOM05D003469 ORTHO05D004084 6.3e-26 120.6 83 67.5
unitig_26.g9845 Utricularia gibba HOM05D003469 ORTHO05D004084 6.3e-26 120.6 89 67.4
Nitab4.5_0005224g0040 Nicotiana tabacum HOM05D003469 ORTHO05D004084 1.1e-25 119.8 89 66.3
MELO3C013095.2 Cucumis melo HOM05D003469 ORTHO05D004084 1.4e-25 119.4 89 66.3
CsaV3_3G043790 Cucumis sativus L. HOM05D003469 ORTHO05D004084 1.4e-25 119.4 89 66.3
AUR62039415 Chenopodium quinoa HOM05D003469 ORTHO05D004084 1.8e-25 119.0 89 64.0
AUR62008300 Chenopodium quinoa HOM05D003469 ORTHO05D004084 2.4e-25 118.6 89 65.2
Ciclev10026956m.g Citrus clementina HOM05D003469 ORTHO05D004084 3.1e-25 118.2 89 69.7
ClCG07G013810 Citrullus lanatus HOM05D003469 ORTHO05D004084 4.1e-25 117.9 89 66.3
AUR62031062 Chenopodium quinoa HOM05D003469 ORTHO05D004084 5.3e-25 117.5 89 64.0
Aa31LG7G2510 Aethionema arabicum HOM05D003469 ORTHO05D004084 1.6e-24 115.9 89 60.7
Thhalv10002713m.g Eutrema salsugineum HOM05D003469 ORTHO05D004084 1.6e-24 115.9 89 62.9
Sed0013857 Sechium edule HOM05D003469 ORTHO05D004084 2.7e-24 115.2 89 65.2
BcaC02g12574 Brassica carinata HOM05D003469 ORTHO05D004084 1.0e-23 113.2 82 67.1
SEGI_08666 Sequoiadendron giganteum HOM05D003469 ORTHO05D004084 3.8e-23 111.3 91 61.5
Zm00001eb171180 Zea mays HOM05D003469 ORTHO05D004084 5.0e-23 110.9 90 60.0
Ah.15g095790 Amaranthus hybridus HOM05D003469 ORTHO05D004084 6.5e-23 110.5 89 59.6
Pp3c8_10360 Physcomitrium patens HOM05D003469 ORTHO05D004084 3.2e-22 108.2 94 60.6
Pp3c8_10366 Physcomitrium patens HOM05D003469 ORTHO05D004084 3.2e-22 108.2 94 60.6
ATR1089G047 Amborella trichopoda HOM05D003469 ORTHO05D004084 4.2e-22 107.8 81 65.4
Actinidia02459 Actinidia chinensis HOM05D003469 ORTHO05D004084 2.7e-21 105.1 81 61.7
SMO164G0159 Selaginella moellendorffii HOM05D003469 ORTHO05D004084 1.4e-20 102.8 92 58.7
Mapoly0024s0108 Marchantia polymorpha HOM05D003469 ORTHO05D004084 6.8e-20 100.5 98 52.0
HPP92_015320 Vanilla planifolia HOM05D003469 ORTHO05D004084 8.8e-20 100.1 71 70.4
Sc09g0010840 Simmondsia chinensis HOM05D003469 ORTHO05D004084 1.7e-18 95.9 89 58.4
SHI03012 Sapria himalayana HOM05D003469 ORTHO05D004084 1.8e-17 92.4 89 57.3
AagrBONN_evm.TU.Sc2ySwM_362.2764 Anthoceros agrestis HOM05D003469 ORTHO05D004084 8.0e-13 77.0 80 51.2
Sp4g05220 Schrenkiella parvula HOM05D003469 ORTHO05D004084 9.8e-11 70.1 50 66.0
FvH4_6g38050 Fragaria vesca HOM05D003469 ORTHO05D004084 1.7e-10 69.3 52 61.5
CBR_g36749 Chara braunii HOM05D003469 ORTHO05D004084 3.7e-10 68.2 102 43.1


User provided reference genes

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