Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc200.33 Carica papaya HOM05D000187 ORTHO05D000230 3.0e-125 451.8 221 100.0
Cpa.g.sc200.34 Carica papaya HOM05D000187 ORTHO05D000230 9.7e-84 313.9 279 64.9
Atru.chr5.2655 Acer truncatum HOM05D000187 ORTHO05D000230 1.8e-37 160.2 296 37.8
COL.COLO4_32635 Corchorus olitorius HOM05D000187 ORTHO05D000230 1.8e-37 160.2 306 35.9
Ciclev10027894m.g Citrus clementina HOM05D000187 ORTHO05D000230 8.9e-37 157.9 292 36.3
Thecc.02G103000 Theobroma cacao HOM05D000187 ORTHO05D000230 2.6e-36 156.4 305 36.4
Potri.001G304900 Populus trichocarpa HOM05D000187 ORTHO05D000230 1.1e-34 151.0 298 35.2
QL11p034968 Quercus lobata HOM05D000187 ORTHO05D000230 5.9e-33 145.2 297 35.4
Gohir.D04G161900 Gossypium hirsutum HOM05D000187 ORTHO05D000230 3.9e-32 142.5 298 35.6
Haze_10099 Corylus avellana HOM05D000187 ORTHO05D000230 5.0e-32 142.1 296 34.8
Gorai.012G149900 Gossypium raimondii HOM05D000187 ORTHO05D000230 5.0e-32 142.1 298 35.6
Gohir.D13G040300 Gossypium hirsutum HOM05D000187 ORTHO05D000230 6.6e-32 141.7 306 33.7
Gorai.013G045200 Gossypium raimondii HOM05D000187 ORTHO05D000230 6.6e-32 141.7 306 33.7
Potri.009G100100 Populus trichocarpa HOM05D000187 ORTHO05D000230 8.6e-32 141.4 297 34.0
Dinv15731 Davidia involucrata HOM05D000187 ORTHO05D000230 1.5e-31 140.6 297 35.0
Cfa004537 Carpinus fangiana HOM05D003014 ORTHO05D003233 1.9e-31 140.2 296 33.8
Duzib132G0227 Durio zibethinus HOM05D000187 ORTHO05D000230 7.3e-31 138.3 306 34.0
Sabra09G0076100 Salix brachista HOM05D000187 ORTHO05D000230 2.8e-30 136.3 296 33.8
Gorai.008G024100 Gossypium raimondii HOM05D000187 ORTHO05D000230 1.4e-29 134.0 301 31.9
Duzib248G1643 Durio zibethinus HOM05D000187 ORTHO05D000230 1.8e-29 133.7 306 33.3
Gohir.A12G023000 Gossypium hirsutum HOM05D000187 ORTHO05D000230 1.5e-28 130.6 297 31.3
Prupe.8G127800 Prunus persica HOM05D000187 ORTHO05D000230 1.5e-28 130.6 294 32.7
Gohir.D12G023700 Gossypium hirsutum HOM05D000187 ORTHO05D000230 7.5e-28 128.3 297 31.0
Sabra16G0191500 Salix brachista HOM05D000187 ORTHO05D000230 8.3e-27 124.8 302 32.1
Lj9C357G3 Lonicera japonica HOM05D000187 ORTHO05D000230 2.7e-25 119.8 243 35.8
CiPaw.06G171600 Carya illinoinensis HOM05D000187 ORTHO05D000230 7.8e-25 118.2 265 33.2
CiPaw.05G008000 Carya illinoinensis HOM05D000187 ORTHO05D000230 1.7e-24 117.1 135 45.2
Gohir.A04G120400 Gossypium hirsutum HOM05D000187 ORTHO05D000230 1.7e-24 117.1 279 33.7
Gohir.A13G041600 Gossypium hirsutum HOM05D000187 ORTHO05D000230 1.6e-22 110.5 146 44.5
Lj9C355G13 Lonicera japonica HOM05D000187 ORTHO05D000230 2.8e-22 109.8 276 32.6
TAR381G0132 Trochodendron aralioides HOM05D000187 ORTHO05D000230 1.1e-21 107.8 294 29.9
arahy.Tifrunner.gnm1.ann1.JELE8T Arachis hypogaea HOM05D000187 ORTHO05D000230 1.4e-21 107.5 300 30.0
arahy.Tifrunner.gnm1.ann1.4UH9TR Arachis hypogaea HOM05D000187 ORTHO05D000230 4.0e-21 105.9 300 29.7
vmacro19510 Vaccinium macrocarpon HOM05D000187 ORTHO05D000230 2.0e-20 103.6 296 30.4
MD00G1050100 Malus domestica HOM05D000187 ORTHO05D000230 1.7e-19 100.5 274 33.9
Dinv39290 Davidia involucrata HOM05D000187 ORTHO05D000230 4.9e-19 99.0 137 43.1
Rhsim05G0086400 Rhododendron simsii HOM05D000187 ORTHO05D000230 1.4e-18 97.4 295 29.5
CSS0000462 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D000230 3.2e-18 96.3 298 28.9
Glyma.07G214600 Glycine max HOM05D000187 ORTHO05D000230 4.1e-18 95.9 135 40.0
CSS0014239 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D000230 7.1e-18 95.1 297 30.0
Potri.002G124300 Populus trichocarpa HOM05D000187 ORTHO05D000230 9.2e-18 94.7 287 30.3
Lalb_Chr09g0328401 Lupinus albus HOM05D000187 ORTHO05D000230 1.6e-17 94.0 135 39.3
Glyma.02G103300 Glycine max HOM05D000187 ORTHO05D000230 2.1e-17 93.6 135 39.3
TAR376G0642 Trochodendron aralioides HOM05D000187 ORTHO05D000230 2.1e-17 93.6 137 42.3
Dinv42168 Davidia involucrata HOM05D000187 ORTHO05D000230 3.5e-17 92.8 250 29.6
Sabra02G0097600 Salix brachista HOM05D000187 ORTHO05D000230 1.3e-16 90.9 287 29.3
Actinidia17875 Actinidia chinensis HOM05D000015 ORTHO05D000734 3.9e-16 89.4 287 28.6
Dinv35939 Davidia involucrata HOM05D000187 ORTHO05D000230 8.6e-16 88.2 136 40.4
Nn1g04799 Nelumbo nucifera HOM05D000187 ORTHO05D000230 1.9e-15 87.0 259 30.5
AUR62042727 Chenopodium quinoa HOM05D000187 ORTHO05D000230 4.3e-15 85.9 292 28.1
TWI36G1439 Tripterygium wilfordii HOM05D000187 ORTHO05D000230 5.6e-15 85.5 277 27.8
AUR62038831 Chenopodium quinoa HOM05D000187 ORTHO05D000230 9.5e-15 84.7 292 27.1
Aqoxy6G01277 Aquilegia oxysepala HOM05D000187 ORTHO05D000230 1.2e-14 84.3 137 37.2
Oeu025583.1 Olea europaea HOM05D000187 ORTHO05D000230 1.2e-14 84.3 125 36.8
Nitab4.5_0007431g0010 Nicotiana tabacum HOM05D000187 ORTHO05D000230 2.1e-14 83.6 272 26.5
MBI19_g14802_MAGBIO Magnolia biondii HOM05D000187 ORTHO05D000230 4.7e-14 82.4 138 36.2
Sp7g31770 Schrenkiella parvula HOM05D000187 ORTHO05D000230 4.7e-14 82.4 235 31.5
Hma1.2p1_0360F.1_g135710 Hydrangea macrophylla HOM05D000187 ORTHO05D000230 6.2e-14 82.0 137 38.0
THA.LOC104807264 Tarenaya hassleriana HOM05D000187 ORTHO05D000230 6.2e-14 82.0 251 30.3
Nitab4.5_0001428g0050 Nicotiana tabacum HOM05D000187 ORTHO05D000230 8.1e-14 81.6 296 26.0
CSS0010742 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D000230 1.1e-13 81.3 138 38.4
TWI31G1329 Tripterygium wilfordii HOM05D000187 ORTHO05D000230 1.1e-13 81.3 104 44.2
Atru.chr13.725 Acer truncatum HOM05D000187 ORTHO05D000230 1.8e-13 80.5 124 42.7
AT4G34040 Arabidopsis thaliana HOM05D000187 ORTHO05D000230 1.8e-13 80.5 226 30.5
Glyma.06G041000 Glycine max HOM05D000187 ORTHO05D000230 1.8e-13 80.5 135 40.0
Lalb_Chr14g0368591 Lupinus albus HOM05D000187 ORTHO05D000230 1.8e-13 80.5 132 40.2
Actinidia01095 Actinidia chinensis HOM05D000187 ORTHO05D000230 3.1e-13 79.7 252 29.0
Glyma.04G039800 Glycine max HOM05D000187 ORTHO05D000230 3.1e-13 79.7 135 40.0
Lalb_Chr08g0245361 Lupinus albus HOM05D000187 ORTHO05D000230 4.0e-13 79.3 131 38.2
Psat7g126120 Pisum sativum HOM05D000187 ORTHO05D000230 5.2e-13 79.0 278 29.1
Actinidia22646 Actinidia chinensis HOM05D000187 ORTHO05D000230 6.8e-13 78.6 257 27.6
AL7G17340 Arabidopsis lyrata HOM05D000187 ORTHO05D000230 6.8e-13 78.6 236 30.5
Carub.0007s0636 Capsella rubella HOM05D000187 ORTHO05D000230 6.8e-13 78.6 230 30.9
Oeu010595.1 Olea europaea HOM05D000187 ORTHO05D000230 6.8e-13 78.6 122 34.4
Hma1.2p1_0370F.1_g137640 Hydrangea macrophylla HOM05D000187 ORTHO05D000230 8.9e-13 78.2 286 28.0
Phvul.009G066000 Phaseolus vulgaris HOM05D000187 ORTHO05D000230 8.9e-13 78.2 124 39.5
Manes.18G039900 Manihot esculenta HOM05D000187 ORTHO05D000230 1.5e-12 77.4 124 37.9
TAR625G0353 Trochodendron aralioides HOM05D000187 ORTHO05D000230 1.5e-12 77.4 136 38.2
Lalb_Chr23g0267101 Lupinus albus HOM05D000187 ORTHO05D000230 2.0e-12 77.0 159 34.0
TWI79G0047 Tripterygium wilfordii HOM05D000187 ORTHO05D000230 2.0e-12 77.0 104 42.3
Haze_18037 Corylus avellana HOM05D000187 ORTHO05D000230 2.6e-12 76.6 131 38.9
VMungo1309G2085 Vigna mungo HOM05D000187 ORTHO05D000230 3.4e-12 76.3 124 38.7
COL.COLO4_26547 Corchorus olitorius HOM05D000187 ORTHO05D000230 5.8e-12 75.5 272 27.2
Psat0s2139g0240 Pisum sativum HOM05D000187 ORTHO05D000230 7.6e-12 75.1 122 38.5
RcHm_v2.0_Chr6g0308261 Rosa chinensis HOM05D000187 ORTHO05D000230 9.9e-12 74.7 124 40.3
Hund23937 Selenicereus undatus HOM05D000187 ORTHO05D000230 9.9e-12 74.7 122 37.7
Oeu012954.1 Olea europaea HOM05D000187 ORTHO05D000230 1.3e-11 74.3 136 34.6
CiPaw.15G054500 Carya illinoinensis HOM05D000187 ORTHO05D000230 2.2e-11 73.6 133 34.6
Duzib116G0443 Durio zibethinus HOM05D000187 ORTHO05D000230 2.2e-11 73.6 193 30.6
Thecc.08G003700 Theobroma cacao HOM05D000187 ORTHO05D000230 2.2e-11 73.6 272 28.3
Lj4g0022544 Lotus japonicus HOM05D000187 ORTHO05D000230 2.9e-11 73.2 279 28.0
Lalb_Chr24g0399301 Lupinus albus HOM05D000187 ORTHO05D000230 2.9e-11 73.2 133 38.3
PSO170G6274 Papaver somniferum HOM05D000187 ORTHO05D000230 2.9e-11 73.2 135 35.6
PSO210G7164 Papaver somniferum HOM05D000187 ORTHO05D000230 2.9e-11 73.2 135 35.6
Prupe.1G432700 Prunus persica HOM05D000187 ORTHO05D000230 2.9e-11 73.2 124 40.3
Sc15g0005980 Simmondsia chinensis HOM05D000187 ORTHO05D000230 2.9e-11 73.2 279 26.2
Duzib093G1398 Durio zibethinus HOM05D000187 ORTHO05D000230 3.8e-11 72.8 123 35.8
TPR.G12607 Trifolium pratense HOM05D000187 ORTHO05D000230 4.9e-11 72.4 278 27.3
Cfa018070 Carpinus fangiana HOM05D000187 ORTHO05D000230 6.4e-11 72.0 281 28.5
MD15G1079700 Malus domestica HOM05D000187 ORTHO05D000230 6.4e-11 72.0 127 39.4
Lalb_Chr22g0355041 Lupinus albus HOM05D000187 ORTHO05D000230 8.4e-11 71.6 124 36.3
Medtr4g085625 Medicago truncatula HOM05D000187 ORTHO05D000230 8.4e-11 71.6 101 42.6
Manes.18G039700 Manihot esculenta HOM05D000187 ORTHO05D000230 1.1e-10 71.2 124 37.1
Ca_13282_v3 Cicer arietinum L. HOM05D000187 ORTHO05D000230 1.4e-10 70.9 122 37.7
Duzib041G0535 Durio zibethinus HOM05D000187 ORTHO05D000230 1.4e-10 70.9 255 26.7
Sc02g0007280 Simmondsia chinensis HOM05D000187 ORTHO05D000230 1.9e-10 70.5 136 35.3
HanXRQChr05g0163141 Helianthus annuus HOM05D000187 ORTHO05D000230 2.4e-10 70.1 224 26.3
arahy.Tifrunner.gnm1.ann1.81V7JE Arachis hypogaea HOM05D000187 ORTHO05D000230 3.2e-10 69.7 146 35.6
arahy.Tifrunner.gnm1.ann1.S0CDCC Arachis hypogaea HOM05D000187 ORTHO05D000230 3.2e-10 69.7 146 35.6
Oeu057264.1 Olea europaea HOM05D000187 ORTHO05D000230 3.2e-10 69.7 191 30.4
QL02p004379 Quercus lobata HOM05D000187 ORTHO05D000230 5.4e-10 68.9 123 36.6
Ca_18706_v3 Cicer arietinum L. HOM05D000187 ORTHO05D000230 7.1e-10 68.6 265 26.8
GSVIVG01009465001 Vitis vinifera HOM05D000187 ORTHO05D000230 7.1e-10 68.6 113 37.2
Peaxi162Scf00016g02027 Petunia axillaris HOM05D000187 ORTHO05D000230 9.2e-10 68.2 269 27.5
MSTRG.20166 Avicennia marina HOM05D000187 ORTHO05D000230 1.2e-09 67.8 281 28.1
CANSAT25G2748 Cannabis sativa HOM05D000187 ORTHO05D000230 1.6e-09 67.4 275 26.5
FAN15G1912 Fragaria x ananassa HOM05D000187 ORTHO05D000230 1.6e-09 67.4 127 37.0
Thhalv10024583m.g Eutrema salsugineum HOM05D000187 ORTHO05D000230 2.1e-09 67.0 239 27.2
FvH4_2g34090 Fragaria vesca HOM05D000187 ORTHO05D000230 2.1e-09 67.0 127 37.0
FAN20G2802 Fragaria x ananassa HOM05D000187 ORTHO05D000230 2.1e-09 67.0 127 37.0
Oeu021388.1 Olea europaea HOM05D000187 ORTHO05D000230 2.1e-09 67.0 136 33.1
Cpa.g.sc21.175 Carica papaya HOM05D000187 ORTHO05D000230 2.7e-09 66.6 123 35.0
Aa31LG2G16460 Aethionema arabicum HOM05D000187 ORTHO05D000230 3.5e-09 66.2 251 27.1
EL10As7g23754 Beta vulgaris HOM05D000187 ORTHO05D000230 3.5e-09 66.2 135 34.1
Nitab4.5_0007480g0050 Nicotiana tabacum HOM05D000187 ORTHO05D000230 4.6e-09 65.9 298 27.5
Solyc10g050170.3 Solanum lycopersicum HOM05D000187 ORTHO05D000230 4.6e-09 65.9 138 30.4
FAN24G2489 Fragaria x ananassa HOM05D000187 ORTHO05D000230 6.0e-09 65.5 127 37.0
Medtr1g019200 Medicago truncatula HOM05D000187 ORTHO05D000230 6.0e-09 65.5 122 35.2
ATR0800G045 Amborella trichopoda HOM05D000187 ORTHO05D000230 7.8e-09 65.1 145 31.0
Hma1.2p1_1072F.1_g254190 Hydrangea macrophylla HOM05D000187 ORTHO05D000230 7.8e-09 65.1 198 26.8
Lj1g0026591 Lotus japonicus HOM05D000187 ORTHO05D000230 7.8e-09 65.1 126 31.7
CARHR242180 Cardamine hirsuta HOM05D000187 ORTHO05D000230 1.0e-08 64.7 225 27.1
Lj5g0011958 Lotus japonicus HOM05D000187 ORTHO05D000230 1.7e-08 63.9 122 36.9
Nitab4.5_0000287g0070 Nicotiana tabacum HOM05D000187 ORTHO05D000230 1.7e-08 63.9 124 36.3
Oeu049993.1 Olea europaea HOM05D000187 ORTHO05D000230 1.7e-08 63.9 136 33.8
Sopen10g021330 Solanum pennellii HOM05D000187 ORTHO05D000230 1.7e-08 63.9 138 29.7
MD08G1097400 Malus domestica HOM05D000187 ORTHO05D000230 2.3e-08 63.5 127 37.0
FAN27G0573 Fragaria x ananassa HOM05D000187 ORTHO05D000230 3.0e-08 63.2 127 36.2
Gorai.009G213900 Gossypium raimondii HOM05D000187 ORTHO05D000230 3.0e-08 63.2 119 37.8
Glyma.17G240800 Glycine max HOM05D000187 ORTHO05D000230 3.9e-08 62.8 132 34.1
Nitab4.5_0006769g0060 Nicotiana tabacum HOM05D000187 ORTHO05D000230 3.9e-08 62.8 124 36.3
Migut.B00363 Erythranthe guttata HOM05D000187 ORTHO05D000230 6.6e-08 62.0 212 28.8
Sp3g28780 Schrenkiella parvula HOM05D000187 ORTHO05D000230 6.6e-08 62.0 256 25.8
AL3G47260 Arabidopsis lyrata HOM05D000187 ORTHO05D000230 8.6e-08 61.6 232 26.3
Lsat_1_v5_gn_5_112240 Lactuca sativa HOM05D000187 ORTHO05D000230 8.6e-08 61.6 244 28.7
Solyc04g078680.4 Solanum lycopersicum HOM05D000187 ORTHO05D000230 1.1e-07 61.2 134 34.3
Sopen04g032280 Solanum pennellii HOM05D000187 ORTHO05D000230 1.1e-07 61.2 134 34.3
THA.LOC104804377 Tarenaya hassleriana HOM05D000187 ORTHO05D000230 1.1e-07 61.2 271 28.4
VMungo0647G1412 Vigna mungo HOM05D000187 ORTHO05D000230 1.1e-07 61.2 132 34.8
Ah.11g042940 Amaranthus hybridus HOM05D000187 ORTHO05D000230 1.9e-07 60.5 134 30.6
MELO3C010842.2 Cucumis melo HOM05D000187 ORTHO05D000230 1.9e-07 60.5 123 39.0
TPR.G3771 Trifolium pratense HOM05D000187 ORTHO05D000230 1.9e-07 60.5 124 33.1
Gohir.A05G204100 Gossypium hirsutum HOM05D000187 ORTHO05D000230 3.3e-07 59.7 123 35.0
PGSC0003DMG400007954 Solanum tuberosum HOM05D000187 ORTHO05D000230 3.3e-07 59.7 135 35.6
Rhsim06G0052700 Rhododendron simsii HOM05D000187 ORTHO05D000230 4.3e-07 59.3 94 38.3
Sed0014852 Sechium edule HOM05D000187 ORTHO05D000230 4.3e-07 59.3 211 29.9
FAN20G1867 Fragaria x ananassa HOM05D000187 ORTHO05D000230 5.6e-07 58.9 252 31.0
Peaxi162Scf00503g00314 Petunia axillaris HOM05D000187 ORTHO05D000230 5.6e-07 58.9 124 33.9
vmacro21501 Vaccinium macrocarpon HOM05D000187 ORTHO05D000230 5.6e-07 58.9 135 31.9
AT2G15530 Arabidopsis thaliana HOM05D000187 ORTHO05D000230 7.3e-07 58.5 232 26.3
Ciclev10000459m.g Citrus clementina HOM05D000187 ORTHO05D000230 7.3e-07 58.5 138 34.1
CsaV3_2G026530 Cucumis sativus L. HOM05D000187 ORTHO05D000230 7.3e-07 58.5 123 39.0
Gohir.D05G207300 Gossypium hirsutum HOM05D000187 ORTHO05D000230 7.3e-07 58.5 119 37.0
Phvul.001G023300 Phaseolus vulgaris HOM05D000187 ORTHO05D000230 7.3e-07 58.5 137 35.8
Lj4C769G12 Lonicera japonica HOM05D000187 ORTHO05D000230 1.2e-06 57.8 124 34.7
Actinidia08286 Actinidia chinensis HOM05D000187 ORTHO05D000230 1.6e-06 57.4 275 24.0
ClCG08G016100 Citrullus lanatus HOM05D000187 ORTHO05D000230 1.6e-06 57.4 123 38.2
Solyc01g107940.3 Solanum lycopersicum HOM05D000187 ORTHO05D000230 2.1e-06 57.0 126 28.6
Sopen01g050120 Solanum pennellii HOM05D000187 ORTHO05D000230 2.1e-06 57.0 124 29.0
RcHm_v2.0_Chr6g0257951 Rosa chinensis HOM05D000187 ORTHO05D000230 2.8e-06 56.6 257 27.6
DCAR_029072 Daucus carota HOM05D000187 ORTHO05D000230 4.7e-06 55.8 267 24.7
FAN15G3694 Fragaria x ananassa HOM05D000187 ORTHO05D000230 4.7e-06 55.8 255 29.4
FAN27G1863 Fragaria x ananassa HOM05D000187 ORTHO05D000230 6.2e-06 55.5 261 28.7
Thhalv10022580m.g Eutrema salsugineum HOM05D000187 ORTHO05D000230 8.1e-06 55.1 234 27.4


User provided reference genes

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