Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc2.147 Carica papaya HOM05D003986 ORTHO05D004916 1.4e-47 192.6 95 100.0
CSS0009129 Camellia sinensis var. sinensis HOM05D003986 ORTHO05D004916 4.0e-26 121.3 82 76.8
COL.COLO4_06656 Corchorus olitorius HOM05D003986 ORTHO05D004916 4.0e-26 121.3 61 96.7
Oeu006345.3 Olea europaea HOM05D003986 ORTHO05D004916 4.0e-26 121.3 62 93.5
Ciclev10017843m.g Citrus clementina HOM05D003986 ORTHO05D004916 8.8e-26 120.2 61 95.1
Nn4g24477 Nelumbo nucifera HOM05D003986 ORTHO05D004916 1.2e-25 119.8 61 95.1
GSVIVG01011619001 Vitis vinifera HOM05D003986 ORTHO05D004916 1.2e-25 119.8 61 95.1
Atru.chr11.800 Acer truncatum HOM05D003986 ORTHO05D004916 2.0e-25 119.0 61 93.4
MSTRG.2114 Avicennia marina HOM05D003986 ORTHO05D004916 2.0e-25 119.0 79 75.9
Sabra19G0063600 Salix brachista HOM05D003986 ORTHO05D004916 2.0e-25 119.0 68 85.3
Lsat_1_v5_gn_3_102381 Lactuca sativa HOM05D003986 ORTHO05D004916 2.6e-25 118.6 61 93.4
Prupe.3G150800 Prunus persica HOM05D003986 ORTHO05D004916 2.6e-25 118.6 61 93.4
Lalb_Chr16g0387401 Lupinus albus HOM05D003986 ORTHO05D004916 3.3e-25 118.2 75 78.7
QL03p038358 Quercus lobata HOM05D003986 ORTHO05D004916 3.3e-25 118.2 69 81.2
Potri.019G054600 Populus trichocarpa HOM05D003986 ORTHO05D004916 4.4e-25 117.9 68 83.8
Haze_08333 Corylus avellana HOM05D003986 ORTHO05D004916 5.7e-25 117.5 61 91.8
CiPaw.06G055800 Carya illinoinensis HOM05D003986 ORTHO05D004916 9.7e-25 116.7 61 91.8
Gohir.D02G136832 Gossypium hirsutum HOM05D003986 ORTHO05D004916 9.7e-25 116.7 61 93.4
Gorai.005G152800 Gossypium raimondii HOM05D003986 ORTHO05D004916 9.7e-25 116.7 61 93.4
THA.LOC104825570 Tarenaya hassleriana HOM05D003986 ORTHO05D004916 9.7e-25 116.7 61 91.8
Actinidia12415 Actinidia chinensis HOM05D003986 ORTHO05D004916 1.3e-24 116.3 61 90.2
Glyma.08G048400 Glycine max HOM05D003986 ORTHO05D004916 1.7e-24 115.9 61 88.5
PGR142G4089 Punica granatum HOM05D003986 ORTHO05D004916 1.7e-24 115.9 61 90.2
Dinv14386 Davidia involucrata HOM05D003986 ORTHO05D004916 2.8e-24 115.2 60 93.3
Migut.E00504 Erythranthe guttata HOM05D003986 ORTHO05D004916 2.8e-24 115.2 79 72.2
MD09G1258800 Malus domestica HOM05D003986 ORTHO05D004916 2.8e-24 115.2 61 90.2
Manes.17G086100 Manihot esculenta HOM05D003986 ORTHO05D004916 2.8e-24 115.2 61 90.2
TWI74G0603 Tripterygium wilfordii HOM05D003986 ORTHO05D004916 2.8e-24 115.2 61 90.2
Gohir.A03G112200 Gossypium hirsutum HOM05D003986 ORTHO05D004916 4.8e-24 114.4 61 91.8
HanXRQChr12g0381871 Helianthus annuus HOM05D003986 ORTHO05D004916 4.8e-24 114.4 61 88.5
Lalb_Chr05g0222051 Lupinus albus HOM05D003986 ORTHO05D004916 4.8e-24 114.4 61 90.2
Sc14g0006590 Simmondsia chinensis HOM05D003986 ORTHO05D004916 4.8e-24 114.4 61 88.5
SGA_v2.0_scaffold3G01767 Striga asiatica HOM05D003986 ORTHO05D004916 4.8e-24 114.4 79 72.2
ECA246G1343 Erigeron canadensis HOM05D003986 ORTHO05D004916 6.3e-24 114.0 67 80.6
Phvul.002G324500 Phaseolus vulgaris HOM05D003986 ORTHO05D004916 6.3e-24 114.0 61 86.9
Solyc05g017890.4 Solanum lycopersicum HOM05D003986 ORTHO05D004916 6.3e-24 114.0 75 73.3
Sopen05g014610 Solanum pennellii HOM05D003986 ORTHO05D004916 6.3e-24 114.0 75 73.3
arahy.Tifrunner.gnm1.ann1.R76IPR Arachis hypogaea HOM05D003986 ORTHO05D004916 8.2e-24 113.6 61 86.9
Glyma.05G241400 Glycine max HOM05D003986 ORTHO05D004916 8.2e-24 113.6 61 86.9
FvH4_4g33200 Fragaria vesca HOM05D003986 ORTHO05D004916 1.4e-23 112.8 74 75.7
FAN07G2168 Fragaria x ananassa HOM05D003986 ORTHO05D004916 1.4e-23 112.8 74 75.7
FAN17G2354 Fragaria x ananassa HOM05D003986 ORTHO05D004916 1.4e-23 112.8 74 75.7
FAN22G0296 Fragaria x ananassa HOM05D003986 ORTHO05D004916 1.4e-23 112.8 74 75.7
Nitab4.5_0000011g0130 Nicotiana tabacum HOM05D003986 ORTHO05D004916 1.4e-23 112.8 75 72.0
RcHm_v2.0_Chr4g0442311 Rosa chinensis HOM05D003986 ORTHO05D004916 1.4e-23 112.8 74 75.7
THA.LOC104807876 Tarenaya hassleriana HOM05D003986 ORTHO05D004916 1.4e-23 112.8 61 88.5
Aqoxy3G04028 Aquilegia oxysepala HOM05D003986 ORTHO05D004916 1.8e-23 112.5 69 76.8
Dinv11756 Davidia involucrata HOM05D003986 ORTHO05D004916 1.8e-23 112.5 61 90.2
Lj3P862T26 Lonicera japonica HOM05D003986 ORTHO05D004916 1.8e-23 112.5 62 90.3
Lj4g0022556 Lotus japonicus HOM05D003986 ORTHO05D004916 1.8e-23 112.5 61 86.9
Potri.013G085000 Populus trichocarpa HOM05D003986 ORTHO05D004916 1.8e-23 112.5 68 80.9
Thecc.02G306600 Theobroma cacao HOM05D003986 ORTHO05D004916 1.8e-23 112.5 61 88.5
MELO3C005265.2 Cucumis melo HOM05D003986 ORTHO05D004916 2.4e-23 112.1 74 74.3
arahy.Tifrunner.gnm1.ann1.374THF Arachis hypogaea HOM05D003986 ORTHO05D004916 4.1e-23 111.3 61 85.2
FAN12G0920 Fragaria x ananassa HOM05D003986 ORTHO05D004916 4.1e-23 111.3 74 74.3
TAR629G0821 Trochodendron aralioides HOM05D003986 ORTHO05D004916 4.1e-23 111.3 60 88.3
Carub.0001s2544 Capsella rubella HOM05D003986 ORTHO05D004916 7.0e-23 110.5 61 88.5
ClCG01G006690 Citrullus lanatus HOM05D003986 ORTHO05D004916 7.0e-23 110.5 61 85.2
Nitab4.5_0004735g0040 Nicotiana tabacum HOM05D003986 ORTHO05D004916 7.0e-23 110.5 75 70.7
Rhsim09G0087200 Rhododendron simsii HOM05D003986 ORTHO05D004916 7.0e-23 110.5 61 86.9
unitig_8.g4016 Utricularia gibba HOM05D003986 ORTHO05D004916 7.0e-23 110.5 61 83.6
CsaV3_5G027880 Cucumis sativus L. HOM05D003986 ORTHO05D004916 9.1e-23 110.2 61 83.6
DCAR_026811 Daucus carota HOM05D003986 ORTHO05D004916 1.2e-22 109.8 61 83.6
AL1G40240 Arabidopsis lyrata HOM05D003986 ORTHO05D004916 1.6e-22 109.4 61 86.9
CARHR026420 Cardamine hirsuta HOM05D003986 ORTHO05D004916 1.6e-22 109.4 61 86.9
AT1G24706 Arabidopsis thaliana HOM05D003986 ORTHO05D004916 2.0e-22 109.0 61 86.9
CDE05G1569 Ceratophyllum demersum HOM05D003986 ORTHO05D004916 2.0e-22 109.0 60 85.0
VMungo0251G0132 Vigna mungo HOM05D003986 ORTHO05D004916 2.0e-22 109.0 61 83.6
Sabra13G0078400 Salix brachista HOM05D003986 ORTHO05D004916 2.7e-22 108.6 60 88.3
CANSAT78G0669 Cannabis sativa HOM05D003986 ORTHO05D004916 3.5e-22 108.2 61 83.6
CDE05G3646 Ceratophyllum demersum HOM05D003986 ORTHO05D004916 3.5e-22 108.2 60 85.0
Eucgr.B02697 Eucalyptus grandis HOM05D003986 ORTHO05D004916 3.5e-22 108.2 60 86.7
Peaxi162Scf00937g00119 Petunia axillaris HOM05D003986 ORTHO05D004916 3.5e-22 108.2 61 82.0
A08p26750 Brassica napus HOM05D003986 ORTHO05D004916 4.5e-22 107.8 75 70.7
C03p73260 Brassica napus HOM05D003986 ORTHO05D004916 4.5e-22 107.8 75 70.7
BolC3t19622H Brassica oleracea HOM05D003986 ORTHO05D004916 4.5e-22 107.8 75 70.7
BraA08t34620Z Brassica rapa HOM05D003986 ORTHO05D004916 4.5e-22 107.8 75 70.7
Thhalv10006540m.g Eutrema salsugineum HOM05D003986 ORTHO05D004916 5.9e-22 107.5 61 85.2
Medtr7g117220 Medicago truncatula HOM05D003986 ORTHO05D004916 5.9e-22 107.5 61 83.6
Aa31LG7G9380 Aethionema arabicum HOM05D003986 ORTHO05D004916 7.7e-22 107.1 61 85.2
Sed0014719 Sechium edule HOM05D003986 ORTHO05D004916 7.7e-22 107.1 60 83.3
Medtr8g106090 Medicago truncatula HOM05D003986 ORTHO05D004916 1.0e-21 106.7 61 85.2
Psat7g004480 Pisum sativum HOM05D003986 ORTHO05D004916 1.0e-21 106.7 61 83.6
Sp1g23110 Schrenkiella parvula HOM05D003986 ORTHO05D004916 1.0e-21 106.7 61 83.6
TPR.G12867 Trifolium pratense HOM05D003986 ORTHO05D004916 1.3e-21 106.3 61 82.0
PSO063G2585 Papaver somniferum HOM05D003986 ORTHO05D004916 1.7e-21 105.9 61 82.0
PSO782G5475 Papaver somniferum HOM05D003986 ORTHO05D004916 1.7e-21 105.9 61 82.0
EL10Ac6g14201 Beta vulgaris HOM05D003986 ORTHO05D004916 2.2e-21 105.5 61 80.3
Rhsim04G0143900 Rhododendron simsii HOM05D003986 ORTHO05D004916 2.9e-21 105.1 60 83.3
Ca_17244_v3 Cicer arietinum L. HOM05D003986 ORTHO05D004916 3.8e-21 104.8 61 83.6
Rhsim04G0125900 Rhododendron simsii HOM05D003986 ORTHO05D004916 3.8e-21 104.8 69 72.5
CAN.G206.116 Capsicum annuum HOM05D003986 ORTHO05D004916 6.5e-21 104.0 76 68.4
Ah.02g127910 Amaranthus hybridus HOM05D003986 ORTHO05D004916 8.5e-21 103.6 79 64.6
AUR62014146 Chenopodium quinoa HOM05D003986 ORTHO05D004916 1.9e-20 102.4 61 78.7
AagrBONN_evm.TU.Sc2ySwM_117.1912 Anthoceros agrestis HOM05D003986 ORTHO05D004916 1.6e-19 99.4 79 64.6
ATR0021G052 Amborella trichopoda HOM05D003986 ORTHO05D004916 4.7e-19 97.8 60 78.3
AUR62038486 Chenopodium quinoa HOM05D003986 ORTHO05D004916 1.8e-18 95.9 72 68.1
Mapoly0001s0369 Marchantia polymorpha HOM05D003986 ORTHO05D004916 1.8e-18 95.9 61 75.4
HPP92_004743 Vanilla planifolia HOM05D003986 ORTHO05D004916 2.3e-18 95.5 66 71.2
Zm00001eb156750 Zea mays HOM05D003986 ORTHO05D004916 5.2e-18 94.4 61 70.5
SHI04403 Sapria himalayana HOM05D003986 ORTHO05D004916 1.2e-17 93.2 54 79.6
Os01g0916800 Oryza sativa ssp. japonica HOM05D003986 ORTHO05D004916 5.7e-17 90.9 61 68.9
SMO145G0041 Selaginella moellendorffii HOM05D003986 ORTHO05D004916 5.7e-17 90.9 62 69.4
Pp3c11_17570 Physcomitrium patens HOM05D003986 ORTHO05D004916 7.5e-17 90.5 66 63.6
Hund24923 Selenicereus undatus HOM05D003986 ORTHO05D004916 6.5e-13 77.4 43 86.0
Ca_29522_v3 Cicer arietinum L. HOM05D003986 ORTHO05D004916 1.9e-12 75.9 125 40.8
Rhsim04G0143600 Rhododendron simsii HOM05D003986 ORTHO05D004916 5.2e-10 67.8 106 42.5


User provided reference genes

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