Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc174.1 Carica papaya HOM05D001978 ORTHO05D003036 9.6e-65 250.0 124 100.0
Cpa.g.sc125.59 Carica papaya HOM05D001978 ORTHO05D003036 4.1e-31 138.3 88 79.5
Cpa.g.sc174.8 Carica papaya HOM05D001978 ORTHO05D003036 5.3e-31 137.9 88 79.5
Duzib138G1653 Durio zibethinus HOM05D001978 ORTHO05D003036 7.5e-17 90.9 90 55.6
Duzib133G0356 Durio zibethinus HOM05D001978 ORTHO05D003036 3.7e-16 88.6 88 55.7
Duzib268G1826 Durio zibethinus HOM05D001978 ORTHO05D003036 6.3e-16 87.8 88 55.7
Ciclev10030570m.g Citrus clementina HOM05D001978 ORTHO05D003036 8.3e-16 87.4 88 54.5
Gorai.008G112200 Gossypium raimondii HOM05D001978 ORTHO05D003036 1.8e-15 86.3 88 53.4
Gohir.D08G064900 Gossypium hirsutum HOM05D001978 ORTHO05D003036 4.1e-15 85.1 115 47.0
Gohir.A08G055600 Gossypium hirsutum HOM05D001978 ORTHO05D003036 9.1e-15 84.0 88 53.4
Gohir.D12G103000 Gossypium hirsutum HOM05D001978 ORTHO05D003036 1.6e-14 83.2 88 52.3
Gorai.004G067200 Gossypium raimondii HOM05D001978 ORTHO05D003036 1.6e-14 83.2 115 46.1
Manes.07G011900 Manihot esculenta HOM05D001978 ORTHO05D003036 6.5e-13 77.8 120 43.3
Gohir.A12G100200 Gossypium hirsutum HOM05D001978 ORTHO05D003036 1.5e-12 76.6 88 48.9
GSVIVG01001441001 Vitis vinifera HOM05D001978 ORTHO05D003036 2.5e-12 75.9 89 56.2
Manes.10G135100 Manihot esculenta HOM05D001978 ORTHO05D003036 3.2e-12 75.5 89 50.6
TAR369G0424 Trochodendron aralioides HOM05D001978 ORTHO05D003036 3.2e-12 75.5 92 57.6
Actinidia21535 Actinidia chinensis HOM05D001978 ORTHO05D003036 9.4e-12 73.9 88 51.1
EL10Ac2g04382 Beta vulgaris HOM05D001978 ORTHO05D003036 9.4e-12 73.9 89 52.8
CSS0022031 Camellia sinensis var. sinensis HOM05D001978 ORTHO05D003036 1.2e-11 73.6 88 51.1
Potri.001G260900 Populus trichocarpa HOM05D001978 ORTHO05D003036 1.6e-11 73.2 89 50.6
Hund16631 Selenicereus undatus HOM05D001978 ORTHO05D003036 2.7e-11 72.4 115 39.1
Ah.10g038540 Amaranthus hybridus HOM05D001978 ORTHO05D003036 6.1e-11 71.2 89 51.7
Gohir.A08G141300 Gossypium hirsutum HOM05D001978 ORTHO05D003036 6.1e-11 71.2 75 54.7
Gohir.A11G073600 Gossypium hirsutum HOM05D001978 ORTHO05D003036 1.0e-10 70.5 70 54.3
Nn7g36348 Nelumbo nucifera HOM05D001978 ORTHO05D003036 1.8e-10 69.7 77 55.8
Actinidia06286 Actinidia chinensis HOM05D001978 ORTHO05D003036 2.3e-10 69.3 89 49.4
Haze_03129 Corylus avellana HOM05D001978 ORTHO05D003036 2.3e-10 69.3 89 50.6
Rhsim07G0059400 Rhododendron simsii HOM05D001978 ORTHO05D003036 2.3e-10 69.3 89 49.4
Thecc.01G404200 Theobroma cacao HOM05D001978 ORTHO05D003036 3.0e-10 68.9 104 47.1
Haze_03128 Corylus avellana HOM05D001978 ORTHO05D003036 4.0e-10 68.6 89 50.6
Ah.16g100700 Amaranthus hybridus HOM05D001978 ORTHO05D003036 6.8e-10 67.8 79 53.2
Nn2g15171 Nelumbo nucifera HOM05D001978 ORTHO05D003036 6.8e-10 67.8 76 52.6
Sabra16G0159500 Salix brachista HOM05D001978 ORTHO05D003036 6.8e-10 67.8 89 48.3
Gorai.007G083600 Gossypium raimondii HOM05D001978 ORTHO05D003036 1.2e-09 67.0 61 59.0
AUR62023105 Chenopodium quinoa HOM05D001978 ORTHO05D003036 1.5e-09 66.6 88 45.5
Gohir.D11G078201 Gossypium hirsutum HOM05D001978 ORTHO05D003036 2.0e-09 66.2 61 57.4
AUR62009427 Chenopodium quinoa HOM05D001978 ORTHO05D003036 3.4e-09 65.5 88 44.3
C04p29860 Brassica napus HOM05D001978 ORTHO05D003036 4.4e-09 65.1 93 47.3
BolC4t24517H Brassica oleracea HOM05D001978 ORTHO05D003036 4.4e-09 65.1 93 47.3
TAR633G0096 Trochodendron aralioides HOM05D001978 ORTHO05D003036 5.7e-09 64.7 112 42.0
Dinv07425 Davidia involucrata HOM05D001978 ORTHO05D003036 7.5e-09 64.3 89 47.2
Cfa022633 Carpinus fangiana HOM05D001978 ORTHO05D003036 9.8e-09 63.9 89 49.4
Lj9A642G52 Lonicera japonica HOM05D001978 ORTHO05D003036 9.8e-09 63.9 89 47.2
vmacro13704 Vaccinium macrocarpon HOM05D001978 ORTHO05D003036 9.8e-09 63.9 85 52.9
Actinidia19428 Actinidia chinensis HOM05D001978 ORTHO05D003036 1.3e-08 63.5 89 48.3
CiPaw.14G004000 Carya illinoinensis HOM05D001978 ORTHO05D003036 1.3e-08 63.5 89 44.9
Sp5g00090 Schrenkiella parvula HOM05D001978 ORTHO05D003036 1.3e-08 63.5 92 45.7
Cpa.g.sc174.4 Carica papaya HOM05D001978 ORTHO05D003036 2.8e-08 62.4 56 66.1
Gohir.D08G162400 Gossypium hirsutum HOM05D001978 ORTHO05D003036 4.9e-08 61.6 69 52.2
Gorai.004G168700 Gossypium raimondii HOM05D001978 ORTHO05D003036 4.9e-08 61.6 69 52.2
Sabra09G0040500 Salix brachista HOM05D001978 ORTHO05D003036 4.9e-08 61.6 89 46.1
Lj7C575G6 Lonicera japonica HOM05D001978 ORTHO05D003036 6.3e-08 61.2 79 46.8
Potri.009G055400 Populus trichocarpa HOM05D001978 ORTHO05D003036 6.3e-08 61.2 89 47.2
TWI53G0392 Tripterygium wilfordii HOM05D001978 ORTHO05D003036 8.3e-08 60.8 88 48.9
THA.LOC104823030 Tarenaya hassleriana HOM05D001978 ORTHO05D003036 1.1e-07 60.5 68 50.0
Migut.B01256 Erythranthe guttata HOM05D001978 ORTHO05D003036 1.4e-07 60.1 89 44.9
Prupe.2G024600 Prunus persica HOM05D001978 ORTHO05D003036 1.4e-07 60.1 89 43.8
Atru.chr11.2543 Acer truncatum HOM05D001978 ORTHO05D003036 2.4e-07 59.3 95 45.3
MBI19_g16674_MAGBIO Magnolia biondii HOM05D001978 ORTHO05D003036 2.4e-07 59.3 89 44.9
Sc11g0009020 Simmondsia chinensis HOM05D001978 ORTHO05D003036 2.4e-07 59.3 89 46.1
QL04p010499 Quercus lobata HOM05D001978 ORTHO05D003036 3.1e-07 58.9 89 49.4
QL06p019642 Quercus lobata HOM05D001978 ORTHO05D003036 3.1e-07 58.9 89 49.4
Rhsim01G0124800 Rhododendron simsii HOM05D001978 ORTHO05D003036 4.1e-07 58.5 89 43.8
Rhsim07G0127800 Rhododendron simsii HOM05D001978 ORTHO05D003036 9.2e-07 57.4 75 50.7
MSTRG.17003 Avicennia marina HOM05D001978 ORTHO05D003036 2.0e-06 56.2 89 43.8
AT3G63460 Arabidopsis thaliana HOM05D001978 ORTHO05D003036 4.5e-06 55.1 71 47.9
BcaB02g08058 Brassica carinata HOM05D001978 ORTHO05D003036 5.9e-06 54.7 72 44.4
BcaC08g45262 Brassica carinata HOM05D001978 ORTHO05D003036 7.7e-06 54.3 80 45.0


User provided reference genes

Program Settings