Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc17.139 Carica papaya HOM05D007973 ORTHO05D011027 4.5e-65 251.1 128 100.0
Cpa.g.sc17.122 Carica papaya HOM05D002276 ORTHO05D002381 5.0e-32 141.4 72 97.2
Cpa.g.sc17.136 Carica papaya HOM05D002276 ORTHO05D002381 4.2e-31 138.3 72 95.8
Cpa.g.c30173.2 Carica papaya HOM05D002276 ORTHO05D002381 1.2e-30 136.7 72 93.1
Cpa.g.c34878 Carica papaya HOM05D002276 ORTHO05D002381 1.6e-30 136.3 72 93.1
Cpa.g.sc17.144 Carica papaya HOM05D002276 ORTHO05D002381 1.6e-30 136.3 72 93.1
Cpa.g.c27218.2 Carica papaya HOM05D002276 ORTHO05D002381 3.6e-30 135.2 72 93.1
Cpa.g.c31254 Carica papaya HOM05D002276 ORTHO05D002381 4.7e-30 134.8 72 91.7
Cpa.g.sc17.131 Carica papaya HOM05D002276 ORTHO05D002381 1.0e-29 133.7 72 91.7
Cpa.g.sc17.140 Carica papaya HOM05D002276 ORTHO05D002381 1.8e-29 132.9 72 91.7
Cpa.g.sc17.143 Carica papaya HOM05D007973 ORTHO05D011027 3.0e-29 132.1 73 89.0
Cpa.g.sc17.145 Carica papaya HOM05D002276 ORTHO05D002381 5.1e-29 131.3 72 90.3
Cpa.g.c40325 Carica papaya HOM05D002276 ORTHO05D002381 6.7e-29 131.0 72 90.3
Cpa.g.c41267 Carica papaya HOM05D002276 ORTHO05D002381 1.1e-28 130.2 71 88.7
Cpa.g.sc956.1 Carica papaya HOM05D002276 ORTHO05D002381 2.0e-28 129.4 66 95.5
Cpa.g.sc736.3 Carica papaya HOM05D002276 ORTHO05D002381 5.5e-23 111.3 72 76.4
Cpa.g.sc736.1 Carica papaya HOM05D002276 ORTHO05D002381 3.5e-17 92.0 69 69.6
Cpa.g.sc17.133 Carica papaya HOM05D002276 ORTHO05D002381 7.2e-15 84.3 44 88.6
THA.LOC104798702 Tarenaya hassleriana HOM05D007973 ORTHO05D011027 2.7e-14 82.4 69 58.0
THA.LOC104819096 Tarenaya hassleriana HOM05D007973 ORTHO05D011027 2.7e-14 82.4 69 58.0
THA.LOC104820138 Tarenaya hassleriana HOM05D007973 ORTHO05D011027 2.7e-14 82.4 69 58.0
THA.LOC104820139 Tarenaya hassleriana HOM05D007973 ORTHO05D011027 2.7e-14 82.4 69 58.0
THA.LOC104813254 Tarenaya hassleriana HOM05D007973 ORTHO05D011027 9.8e-12 73.9 70 51.4
AL4G22500 Arabidopsis lyrata HOM05D007973 ORTHO05D011363 1.2e-09 67.0 71 50.7
AL4G22510 Arabidopsis lyrata HOM05D007973 ORTHO05D011363 1.2e-09 67.0 71 50.7
Carub.0004s1425 Capsella rubella HOM05D007973 ORTHO05D011027 2.0e-09 66.2 69 49.3
AT2G13640 Arabidopsis thaliana HOM05D007973 ORTHO05D011363 2.7e-09 65.9 71 47.9
Sp4g14980 Schrenkiella parvula HOM05D007973 ORTHO05D011363 2.7e-09 65.9 71 49.3
AL4G28640 Arabidopsis lyrata HOM05D007973 ORTHO05D011027 1.3e-08 63.5 68 48.5
AT2G33300 Arabidopsis thaliana HOM05D007973 ORTHO05D011027 1.3e-08 63.5 68 47.1
Cpa.g.sc6.370 Carica papaya HOM05D002276 ORTHO05D002381 1.7e-08 63.2 76 44.7
Atru.chr8.94 Acer truncatum HOM05D002276 ORTHO05D002381 2.2e-08 62.8 71 43.7
AT2G27780 Arabidopsis thaliana HOM05D007973 ORTHO05D011363 2.2e-08 62.8 71 46.5
AT5G27310 Arabidopsis thaliana HOM05D007973 ORTHO05D011363 2.2e-08 62.8 83 41.0
AL4G28320 Arabidopsis lyrata HOM05D007973 ORTHO05D011027 2.9e-08 62.4 69 49.3
AT2G32820 Arabidopsis thaliana HOM05D007973 ORTHO05D011027 2.9e-08 62.4 78 44.9
Aa31LG10G13500 Aethionema arabicum HOM05D007973 ORTHO05D011027 3.8e-08 62.0 68 47.1
Aa31LG10G13910 Aethionema arabicum HOM05D007973 ORTHO05D011027 3.8e-08 62.0 68 48.5
AT2G33090 Arabidopsis thaliana HOM05D007973 ORTHO05D011027 3.8e-08 62.0 68 47.1
BcaB01g03937 Brassica carinata HOM05D007973 ORTHO05D011027 3.8e-08 62.0 69 46.4
Thhalv10017705m.g Eutrema salsugineum HOM05D007973 ORTHO05D011027 3.8e-08 62.0 69 47.8
BcaC01g05887 Brassica carinata HOM05D007973 ORTHO05D011027 5.0e-08 61.6 68 47.1
A03p18360 Brassica napus HOM05D007973 ORTHO05D011027 5.0e-08 61.6 68 47.1
C03p21430 Brassica napus HOM05D007973 ORTHO05D011027 5.0e-08 61.6 68 47.1
BolC3t14526H Brassica oleracea HOM05D007973 ORTHO05D011027 5.0e-08 61.6 68 47.1
BraA03t11099Z Brassica rapa HOM05D007973 ORTHO05D011027 5.0e-08 61.6 68 47.1
Carub.0004s1401 Capsella rubella HOM05D007973 ORTHO05D011363 5.0e-08 61.6 83 41.0
CARHR126530 Cardamine hirsuta HOM05D007973 ORTHO05D011363 5.0e-08 61.6 83 41.0
Ciclev10011982m.g Citrus clementina HOM05D002276 ORTHO05D002381 6.5e-08 61.2 71 45.1
BcaB02g10486 Brassica carinata HOM05D007973 ORTHO05D011363 8.5e-08 60.8 71 46.5
A05p12970 Brassica napus HOM05D007973 ORTHO05D011363 8.5e-08 60.8 100 36.0
C04p17050 Brassica napus HOM05D007973 ORTHO05D011363 8.5e-08 60.8 100 36.0
BolC4t23258H Brassica oleracea HOM05D007973 ORTHO05D011363 8.5e-08 60.8 100 36.0
BraA05t20237Z Brassica rapa HOM05D007973 ORTHO05D011363 8.5e-08 60.8 100 36.0
BcaB02g10456 Brassica carinata HOM05D007973 ORTHO05D011363 1.1e-07 60.5 71 45.1
A05p13330 Brassica napus HOM05D007973 ORTHO05D011363 1.1e-07 60.5 95 38.9
BraA05t20272Z Brassica rapa HOM05D007973 ORTHO05D011363 1.1e-07 60.5 95 38.9
BcaC01g05888 Brassica carinata HOM05D007973 ORTHO05D011027 1.9e-07 59.7 68 48.5
C03p21420 Brassica napus HOM05D007973 ORTHO05D011027 1.9e-07 59.7 68 48.5
BcaB02g10484 Brassica carinata HOM05D007973 ORTHO05D011363 3.2e-07 58.9 84 38.1
BolC3t14525H Brassica oleracea HOM05D007973 ORTHO05D011027 3.2e-07 58.9 68 47.1
Thhalv10017685m.g Eutrema salsugineum HOM05D007973 ORTHO05D011027 3.2e-07 58.9 68 47.1
THA.LOC104806195 Tarenaya hassleriana HOM05D002276 ORTHO05D002381 3.2e-07 58.9 78 41.0
A05p12940 Brassica napus HOM05D007973 ORTHO05D011363 4.2e-07 58.5 100 36.0
A05p13350 Brassica napus HOM05D007973 ORTHO05D011363 4.2e-07 58.5 82 40.2
BraA05t20234Z Brassica rapa HOM05D007973 ORTHO05D011363 4.2e-07 58.5 100 36.0
BraA05t20274Z Brassica rapa HOM05D007973 ORTHO05D011363 4.2e-07 58.5 82 40.2
BcaB01g03962 Brassica carinata HOM05D007973 ORTHO05D011027 1.2e-06 57.0 68 47.1
BcaB01g03963 Brassica carinata HOM05D007973 ORTHO05D011027 1.2e-06 57.0 68 47.1
BcaC01g05861 Brassica carinata HOM05D007973 ORTHO05D011027 1.2e-06 57.0 68 44.1
C03p21640 Brassica napus HOM05D007973 ORTHO05D011027 1.2e-06 57.0 68 44.1
BolC3t14548H Brassica oleracea HOM05D007973 ORTHO05D011027 1.2e-06 57.0 68 44.1
BcaB01g03935 Brassica carinata HOM05D007973 ORTHO05D011027 2.1e-06 56.2 67 44.8
BcaB02g10454 Brassica carinata HOM05D007973 ORTHO05D011363 2.1e-06 56.2 71 42.3
C04p17440 Brassica napus HOM05D007973 ORTHO05D011363 2.1e-06 56.2 83 38.6
BolC4t23294H Brassica oleracea HOM05D007973 ORTHO05D011363 2.1e-06 56.2 83 38.6
CARHR120790 Cardamine hirsuta HOM05D007973 ORTHO05D011027 2.1e-06 56.2 67 44.8
Manes.09G123400 Manihot esculenta HOM05D002276 ORTHO05D002381 2.1e-06 56.2 71 40.8
BcaB01g03938 Brassica carinata HOM05D007973 ORTHO05D011027 2.7e-06 55.8 67 44.8
C04p17030 Brassica napus HOM05D007973 ORTHO05D011363 2.7e-06 55.8 83 38.6
Aa31LG5G23370 Aethionema arabicum HOM05D002276 ORTHO05D002381 4.7e-06 55.1 71 38.0
TWI53G2065 Tripterygium wilfordii HOM05D002276 ORTHO05D002381 4.7e-06 55.1 71 40.8
GSVIVG01030171001 Vitis vinifera HOM05D002276 ORTHO05D002381 4.7e-06 55.1 71 40.8
Cpa.g.sc86.75 Carica papaya HOM05D002276 ORTHO05D002381 6.1e-06 54.7 71 39.4
TAR623G1532 Trochodendron aralioides HOM05D002276 ORTHO05D002381 6.1e-06 54.7 71 40.8
TWI77G0614 Tripterygium wilfordii HOM05D002276 ORTHO05D002381 8.0e-06 54.3 71 40.8


User provided reference genes

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