Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc162.4 Carica papaya HOM05D003159 ORTHO05D003780 2.9e-100 368.6 193 100.0
Sabra19G0017400 Salix brachista HOM05D003159 ORTHO05D003780 1.5e-88 329.7 193 87.0
Sabra19G0024900 Salix brachista HOM05D003159 ORTHO05D003780 5.7e-88 327.8 193 86.5
Duzib128G1665 Durio zibethinus HOM05D003159 ORTHO05D003780 2.1e-87 325.9 193 88.1
Potri.019G012300 Populus trichocarpa HOM05D003159 ORTHO05D003780 6.2e-87 324.3 193 85.5
Manes.15G108700 Manihot esculenta HOM05D003159 ORTHO05D003780 4.0e-86 321.6 193 85.5
GSVIVG01036258001 Vitis vinifera HOM05D003159 ORTHO05D003780 1.5e-85 319.7 193 84.5
Prupe.6G346800 Prunus persica HOM05D003159 ORTHO05D003780 2.0e-85 319.3 193 86.0
Gohir.A09G017500 Gossypium hirsutum HOM05D003159 ORTHO05D003780 5.8e-85 317.8 191 85.9
QL01p030114 Quercus lobata HOM05D003159 ORTHO05D003780 5.8e-85 317.8 192 83.3
Potri.013G043500 Populus trichocarpa HOM05D003159 ORTHO05D003780 1.0e-84 317.0 192 84.4
Thecc.05G277700 Theobroma cacao HOM05D003159 ORTHO05D003780 1.3e-84 316.6 191 86.4
Gohir.D13G031700 Gossypium hirsutum HOM05D003159 ORTHO05D003780 2.2e-84 315.8 191 85.3
Gorai.007G279300 Gossypium raimondii HOM05D003159 ORTHO05D003780 2.2e-84 315.8 191 84.8
Gorai.013G036100 Gossypium raimondii HOM05D003159 ORTHO05D003780 2.2e-84 315.8 191 85.3
MD04G1227600 Malus domestica HOM05D003159 ORTHO05D003780 2.9e-84 315.5 193 84.5
MD12G1244300 Malus domestica HOM05D003159 ORTHO05D003780 2.9e-84 315.5 193 83.9
COL.COLO4_15406 Corchorus olitorius HOM05D003159 ORTHO05D003780 1.9e-83 312.8 193 82.4
Gohir.D11G260700 Gossypium hirsutum HOM05D003159 ORTHO05D003780 4.2e-83 311.6 191 83.8
vmacro19526 Vaccinium macrocarpon HOM05D003159 ORTHO05D003780 1.0e-81 307.0 191 82.7
vmacro20008 Vaccinium macrocarpon HOM05D003159 ORTHO05D003780 1.0e-81 307.0 191 82.2
Nn3g19572 Nelumbo nucifera HOM05D003159 ORTHO05D003780 1.8e-81 306.2 193 80.8
CiPaw.08G119500 Carya illinoinensis HOM05D003159 ORTHO05D003780 1.5e-80 303.1 193 81.3
CANSAT54G0311 Cannabis sativa HOM05D003159 ORTHO05D003780 1.9e-80 302.8 190 82.1
Eucgr.J00270 Eucalyptus grandis HOM05D003159 ORTHO05D003780 1.9e-80 302.8 195 81.5
Ciclev10027983m.g Citrus clementina HOM05D003159 ORTHO05D003780 3.3e-80 302.0 192 81.2
Rhsim01G0186900 Rhododendron simsii HOM05D003159 ORTHO05D003780 7.4e-80 300.8 199 79.4
Actinidia06777 Actinidia chinensis HOM05D003159 ORTHO05D003780 9.7e-80 300.4 191 80.6
MSTRG.927 Avicennia marina HOM05D003159 ORTHO05D003780 1.6e-79 299.7 190 81.1
QL07p003261 Quercus lobata HOM05D003159 ORTHO05D003780 2.8e-79 298.9 192 80.2
RcHm_v2.0_Chr3g0450361 Rosa chinensis HOM05D003159 ORTHO05D003780 4.1e-78 295.0 193 80.3
DCAR_028953 Daucus carota HOM05D003159 ORTHO05D003780 6.9e-78 294.3 191 79.1
PGR031G1742 Punica granatum HOM05D003159 ORTHO05D003780 6.9e-78 294.3 191 77.0
Haze_04383 Corylus avellana HOM05D003159 ORTHO05D003780 1.2e-77 293.5 191 80.6
Migut.F01579 Erythranthe guttata HOM05D003159 ORTHO05D003780 1.5e-77 293.1 191 79.1
SGA_v2.0_scaffold4G01959 Striga asiatica HOM05D003159 ORTHO05D003780 2.6e-77 292.4 197 77.7
TAR362G0530 Trochodendron aralioides HOM05D003159 ORTHO05D003780 3.4e-77 292.0 193 76.2
Dinv05722 Davidia involucrata HOM05D003159 ORTHO05D003780 5.9e-77 291.2 183 83.1
SalBow8G0718 Salvia bowleyana HOM05D003159 ORTHO05D003780 2.2e-76 289.3 191 78.0
Sc06g0010270 Simmondsia chinensis HOM05D003159 ORTHO05D003780 3.8e-76 288.5 193 78.8
Ah.09g228380 Amaranthus hybridus HOM05D003159 ORTHO05D003780 6.5e-76 287.7 191 77.0
Peaxi162Scf00120g00723 Petunia axillaris HOM05D003159 ORTHO05D003780 8.5e-76 287.3 191 75.9
PGSC0003DMG400000995 Solanum tuberosum HOM05D003159 ORTHO05D003780 1.9e-75 286.2 191 76.4
AUR62033998 Chenopodium quinoa HOM05D003159 ORTHO05D003780 4.2e-75 285.0 191 77.0
Cc02_g09140 Coffea canephora HOM05D003159 ORTHO05D003780 4.2e-75 285.0 191 77.5
Glyma.10G163700 Glycine max HOM05D003159 ORTHO05D003780 7.2e-75 284.3 188 78.7
Phvul.007G188800 Phaseolus vulgaris HOM05D003159 ORTHO05D003780 1.2e-74 283.5 187 78.6
TPR.G33936 Trifolium pratense HOM05D003159 ORTHO05D003780 1.2e-74 283.5 188 76.6
Oeu054532.1 Olea europaea HOM05D003159 ORTHO05D003780 2.1e-74 282.7 191 76.4
Solyc11g006340.2 Solanum lycopersicum HOM05D003159 ORTHO05D003780 2.1e-74 282.7 191 75.4
Sopen11g002240 Solanum pennellii HOM05D003159 ORTHO05D003780 2.1e-74 282.7 191 75.4
THA.LOC104808027 Tarenaya hassleriana HOM05D003159 ORTHO05D003780 2.1e-74 282.7 191 75.4
Nitab4.5_0001781g0080 Nicotiana tabacum HOM05D003159 ORTHO05D003780 2.7e-74 282.3 191 75.9
Rhsim05G0176200 Rhododendron simsii HOM05D003159 ORTHO05D003780 2.7e-74 282.3 236 66.5
Glyma.20G226300 Glycine max HOM05D003159 ORTHO05D003780 3.6e-74 282.0 188 78.2
Lj5g0023348 Lotus japonicus HOM05D003159 ORTHO05D003780 4.6e-74 281.6 190 75.8
CAN.G143.64 Capsicum annuum HOM05D003159 ORTHO05D003780 1.4e-73 280.0 191 74.9
CARHR131850 Cardamine hirsuta HOM05D003159 ORTHO05D003780 1.8e-73 279.6 191 74.9
Carub.0004s1964 Capsella rubella HOM05D003159 ORTHO05D003780 3.0e-73 278.9 191 73.3
Thhalv10016367m.g Eutrema salsugineum HOM05D003159 ORTHO05D003780 3.9e-73 278.5 191 73.8
Lsat_1_v5_gn_9_121981 Lactuca sativa HOM05D003159 ORTHO05D003780 3.9e-73 278.5 190 78.4
Lalb_Chr06g0168161 Lupinus albus HOM05D003159 ORTHO05D003780 5.1e-73 278.1 191 75.9
HanXRQChr05g0152861 Helianthus annuus HOM05D003159 ORTHO05D003780 6.7e-73 277.7 191 76.4
Sed0018461 Sechium edule HOM05D003159 ORTHO05D003780 6.7e-73 277.7 187 77.0
Sp4g20070 Schrenkiella parvula HOM05D003159 ORTHO05D003780 8.8e-73 277.3 191 72.8
arahy.Tifrunner.gnm1.ann1.N0IL4Q Arachis hypogaea HOM05D003159 ORTHO05D003780 1.1e-72 276.9 191 75.9
arahy.Tifrunner.gnm1.ann1.W48W00 Arachis hypogaea HOM05D003159 ORTHO05D003780 1.1e-72 276.9 191 75.9
CsaV3_2G033180 Cucumis sativus L. HOM05D003159 ORTHO05D003780 2.5e-72 275.8 187 76.5
BcaB06g29020 Brassica carinata HOM05D003159 ORTHO05D003780 3.3e-72 275.4 191 72.3
BcaC01g05601 Brassica carinata HOM05D003159 ORTHO05D003780 3.3e-72 275.4 192 72.4
MELO3C008089.2 Cucumis melo HOM05D003159 ORTHO05D003780 3.3e-72 275.4 187 75.9
HanXRQChr04g0112121 Helianthus annuus HOM05D003159 ORTHO05D003780 4.3e-72 275.0 191 77.0
AL4G34620 Arabidopsis lyrata HOM05D003159 ORTHO05D003780 7.4e-72 274.2 191 73.3
C03p24440 Brassica napus HOM05D003159 ORTHO05D003780 7.4e-72 274.2 192 71.9
ECA248G3699 Erigeron canadensis HOM05D003159 ORTHO05D003780 7.4e-72 274.2 191 76.4
FvH4_5g12790 Fragaria vesca HOM05D003159 ORTHO05D003780 7.4e-72 274.2 193 73.6
FAN08G2202 Fragaria x ananassa HOM05D003159 ORTHO05D003780 7.4e-72 274.2 193 73.6
FAN18G4090 Fragaria x ananassa HOM05D003159 ORTHO05D003780 7.4e-72 274.2 193 73.6
AT2G37690 Arabidopsis thaliana HOM05D003159 ORTHO05D003780 1.7e-71 273.1 191 72.3
EL10Ac8g19239 Beta vulgaris HOM05D003159 ORTHO05D003780 1.7e-71 273.1 218 68.3
BcaC02g07498 Brassica carinata HOM05D003159 ORTHO05D003780 1.7e-71 273.1 191 71.7
C04p66140 Brassica napus HOM05D003159 ORTHO05D003780 1.7e-71 273.1 191 71.7
Aa31sc70G90 Aethionema arabicum HOM05D003159 ORTHO05D003780 2.2e-71 272.7 191 72.3
TWI81G0941 Tripterygium wilfordii HOM05D003159 ORTHO05D003780 2.2e-71 272.7 192 75.5
Sabra19G0025600 Salix brachista HOM05D003159 ORTHO05D003780 2.8e-71 272.3 191 76.4
A03p20800 Brassica napus HOM05D003159 ORTHO05D003780 3.7e-71 271.9 191 71.2
BolC4t28117H Brassica oleracea HOM05D003159 ORTHO05D003780 4.8e-71 271.6 191 71.2
A04p28880 Brassica napus HOM05D003159 ORTHO05D003780 6.3e-71 271.2 191 71.7
CSS0035771 Camellia sinensis var. sinensis HOM05D003159 ORTHO05D003780 8.2e-71 270.8 180 80.0
BcaB01g03763 Brassica carinata HOM05D003159 ORTHO05D003780 1.4e-70 270.0 191 70.7
FAN18G4088 Fragaria x ananassa HOM05D003159 ORTHO05D003780 1.8e-70 269.6 195 72.8
BraA03t11320Z Brassica rapa HOM05D003159 ORTHO05D003780 2.4e-70 269.2 197 69.0
Medtr1g080500 Medicago truncatula HOM05D003159 ORTHO05D003780 1.5e-69 266.5 188 72.3
Aqoxy6G02795 Aquilegia oxysepala HOM05D003159 ORTHO05D003780 2.0e-69 266.2 193 71.5
BraA04t18362Z Brassica rapa HOM05D003159 ORTHO05D003780 2.0e-69 266.2 199 68.3
Sabra19G0025000 Salix brachista HOM05D003159 ORTHO05D003780 2.0e-69 266.2 163 85.3
Sabra19G0025400 Salix brachista HOM05D003159 ORTHO05D003780 1.0e-68 263.8 193 73.6
Hund02191 Selenicereus undatus HOM05D003159 ORTHO05D003780 1.0e-68 263.8 189 73.5
Aa31LG8G11740 Aethionema arabicum HOM05D003159 ORTHO05D003780 1.3e-68 263.5 197 71.1
Lalb_Chr21g0311061 Lupinus albus HOM05D003159 ORTHO05D003780 2.2e-68 262.7 191 71.7
DCAR_001864 Daucus carota HOM05D003159 ORTHO05D003780 7.2e-67 257.7 186 73.7
Sabra19G0025200 Salix brachista HOM05D003159 ORTHO05D003780 1.6e-66 256.5 173 79.2
ATR0111G007 Amborella trichopoda HOM05D003159 ORTHO05D003780 1.0e-65 253.8 188 71.3
Aqoxy4G01990 Aquilegia oxysepala HOM05D003159 ORTHO05D003780 3.0e-65 252.3 175 73.1
BolC3t14843H Brassica oleracea HOM05D003159 ORTHO05D003780 2.0e-64 249.6 174 73.6
AT2G05140 Arabidopsis thaliana HOM05D003159 ORTHO05D003780 7.4e-64 247.7 161 77.0
Lj3C918G0 Lonicera japonica HOM05D003159 ORTHO05D003780 1.3e-63 246.9 213 63.8
Sabra19G0025100 Salix brachista HOM05D003159 ORTHO05D003780 1.3e-63 246.9 154 85.1
VMungo0720G2291 Vigna mungo HOM05D003159 ORTHO05D003780 2.2e-63 246.1 159 81.1
TPR.G26626 Trifolium pratense HOM05D003159 ORTHO05D003780 4.8e-63 245.0 192 67.7
MBI12_g21500_MAGBIO Magnolia biondii HOM05D003159 ORTHO05D003780 5.3e-62 241.5 193 65.8
Ca_10033_v3 Cicer arietinum L. HOM05D003159 ORTHO05D003780 7.0e-62 241.1 161 77.6
HPP92_021777 Vanilla planifolia HOM05D003159 ORTHO05D003780 9.1e-62 240.7 190 64.7
Psat6g145160 Pisum sativum HOM05D003159 ORTHO05D003780 1.0e-60 237.3 162 74.7
PSO675G5476 Papaver somniferum HOM05D003159 ORTHO05D003780 2.2e-60 236.1 191 66.0
PSO782G2231 Papaver somniferum HOM05D003159 ORTHO05D003780 5.0e-60 235.0 190 64.2
PSO170G0868 Papaver somniferum HOM05D003159 ORTHO05D003780 8.5e-60 234.2 190 64.2
PSO541G5176 Papaver somniferum HOM05D003159 ORTHO05D003780 1.1e-59 233.8 193 64.8
SHI06090 Sapria himalayana HOM05D003159 ORTHO05D003780 4.2e-59 231.9 182 68.7
Pp3c2_24240 Physcomitrium patens HOM05D003159 ORTHO05D003780 1.2e-58 230.3 189 63.0
Mapoly0046s0034 Marchantia polymorpha HOM05D003159 ORTHO05D003780 3.6e-58 228.8 169 69.8
unitig_22.g5684 Utricularia gibba HOM05D003159 ORTHO05D003780 4.7e-58 228.4 165 74.5
AUR62027480 Chenopodium quinoa HOM05D003159 ORTHO05D003780 6.1e-58 228.0 163 75.5
CDE11G0603 Ceratophyllum demersum HOM05D003159 ORTHO05D003780 1.4e-57 226.9 190 64.7
CDE05G0407 Ceratophyllum demersum HOM05D003159 ORTHO05D003780 3.0e-57 225.7 189 64.0
Os01g0199900 Oryza sativa ssp. japonica HOM05D003159 ORTHO05D003780 4.8e-55 218.4 187 61.0
Nitab4.5_0007901g0030 Nicotiana tabacum HOM05D003159 ORTHO05D003780 6.3e-55 218.0 202 64.9
Zm00001eb120570 Zea mays HOM05D003159 ORTHO05D003780 1.4e-54 216.9 187 61.5
QL03p028499 Quercus lobata HOM05D003159 ORTHO05D003780 1.6e-53 213.4 170 70.0
PSO170G3230 Papaver somniferum HOM05D003159 ORTHO05D003780 2.0e-53 213.0 190 60.5
MCO10G267 Micromonas commoda HOM05D003159 ORTHO05D003780 2.9e-52 209.1 173 61.8
SMO270G0125 Selaginella moellendorffii HOM05D003159 ORTHO05D003780 6.5e-52 208.0 165 65.5
Cre12.g503300 Chlamydomonas reinhardtii HOM05D003159 ORTHO05D003780 4.2e-51 205.3 176 61.9
THA.LOC104799866 Tarenaya hassleriana HOM05D003159 ORTHO05D003780 1.4e-49 200.3 157 67.5
SMO358G0312 Selaginella moellendorffii HOM05D003159 ORTHO05D003780 1.8e-49 199.9 191 55.0
Hma1.2p1_0345F.1_g131280 Hydrangea macrophylla HOM05D003159 ORTHO05D003780 4.4e-48 195.3 127 77.2
PRCOL_00005277 Prasinoderma coloniale HOM05D003159 ORTHO05D003780 2.8e-47 192.6 176 60.2
Cfa025150 Carpinus fangiana HOM05D003159 ORTHO05D003780 1.7e-44 183.3 166 56.6
Sed0012102 Sechium edule HOM05D003159 ORTHO05D003780 2.5e-43 179.5 157 63.7
arahy.Tifrunner.gnm1.ann1.H397QS Arachis hypogaea HOM05D003159 ORTHO05D003780 1.2e-42 177.2 103 88.3
Sabra19G0025900 Salix brachista HOM05D003159 ORTHO05D003780 7.5e-40 167.9 99 88.9
TAR362G1104 Trochodendron aralioides HOM05D003159 ORTHO05D003468 4.9e-39 165.2 101 84.2
Rhsim05G0177800 Rhododendron simsii HOM05D003159 ORTHO05D000029 1.6e-37 160.2 189 50.3
Glyma.01G101050 Glycine max HOM05D003159 ORTHO05D003780 2.7e-37 159.5 97 85.6
ClCG11G008930 Citrullus lanatus HOM05D003159 ORTHO05D003780 2.3e-36 156.4 126 67.5
FAN02G2337 Fragaria x ananassa HOM05D003159 ORTHO05D003780 3.3e-35 152.5 141 63.8
Sabra13G0039800 Salix brachista HOM05D003159 ORTHO05D003780 8.9e-33 144.4 95 74.7
TAR362G0177 Trochodendron aralioides HOM05D003159 ORTHO05D003780 5.7e-32 141.7 137 60.6
CBR_g8948 Chara braunii HOM05D003159 ORTHO05D003780 2.8e-31 139.4 164 51.2
FAN14G5085 Fragaria x ananassa HOM05D003159 ORTHO05D003780 4.9e-31 138.7 142 59.9
SEGI_34284 Sequoiadendron giganteum HOM05D003159 ORTHO05D003780 4.1e-30 135.6 96 70.8
FAN09G3766 Fragaria x ananassa HOM05D003159 ORTHO05D003780 5.4e-30 135.2 131 62.6
BcaB02g09259 Brassica carinata HOM05D003159 ORTHO05D003780 7.8e-29 131.3 91 71.4
FvH4_6g42830 Fragaria vesca HOM05D003159 ORTHO05D003780 3.9e-28 129.0 118 64.4
Ciclev10021626m.g Citrus clementina HOM05D003159 ORTHO05D003780 6.6e-28 128.3 157 47.8
arahy.Tifrunner.gnm1.ann1.I3FRE1 Arachis hypogaea HOM05D003159 ORTHO05D003780 9.5e-27 124.4 98 71.4
Gorai.007G279200 Gossypium raimondii HOM05D003159 ORTHO05D003780 3.1e-25 119.4 68 86.8
Lalb_Chr06g0166701 Lupinus albus HOM05D003159 ORTHO05D003780 1.7e-23 113.6 83 68.7
FAN05G1365 Fragaria x ananassa HOM05D003159 ORTHO05D003780 3.2e-22 109.4 119 57.1
C09p45540 Brassica napus HOM05D003159 ORTHO05D003780 1.6e-21 107.1 118 48.3
BcaC04g20281 Brassica carinata HOM05D003159 ORTHO05D003780 6.6e-20 101.7 74 63.5
Lalb_Chr06g0166731 Lupinus albus HOM05D003159 ORTHO05D003780 5.6e-19 98.6 111 51.4
BolC9t57426H Brassica oleracea HOM05D003159 ORTHO05D003780 6.2e-18 95.1 74 62.2
Cc06_g22420 Coffea canephora HOM05D003159 ORTHO05D003780 6.8e-17 91.7 65 67.7
Lsat_1_v5_gn_3_133181 Lactuca sativa HOM05D003297 ORTHO05D004027 5.4e-14 82.0 57 75.4
Gohir.A11G250300 Gossypium hirsutum HOM05D003159 ORTHO05D003780 2.1e-13 80.1 56 69.6
arahy.Tifrunner.gnm1.ann1.EY0MZ8 Arachis hypogaea HOM05D000422 ORTHO05D010939 4.6e-13 79.0 81 60.5
Nitab4.5_0011494g0040 Nicotiana tabacum HOM05D003159 ORTHO05D033874 2.3e-12 76.6 70 54.3
GSVIVG01036259001 Vitis vinifera HOM05D003159 ORTHO05D003780 3.9e-12 75.9 93 58.1
CSS0017783 Camellia sinensis var. sinensis HOM05D003159 ORTHO05D033874 3.3e-11 72.8 56 66.1
TAR406G0002 Trochodendron aralioides HOM05D003159 ORTHO05D003780 1.6e-10 70.5 69 58.0
Psat1g051800 Pisum sativum HOM05D000001 ORTHO05D000003 2.4e-06 56.6 41 65.9


User provided reference genes

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