Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc162.3 Carica papaya HOM05D003159 ORTHO05D003780 7.2e-311 1069.7 526 100.0
Thecc.05G277700 Theobroma cacao HOM05D003159 ORTHO05D003780 1.3e-174 617.1 473 70.4
Manes.15G108700 Manihot esculenta HOM05D003159 ORTHO05D003780 4.8e-174 615.1 326 91.1
Potri.019G012300 Populus trichocarpa HOM05D003159 ORTHO05D003780 5.3e-173 611.7 327 89.3
Duzib128G1665 Durio zibethinus HOM05D003159 ORTHO05D003780 5.9e-172 608.2 474 68.8
Sabra19G0017400 Salix brachista HOM05D003159 ORTHO05D003780 5.9e-172 608.2 327 89.0
Sabra19G0024900 Salix brachista HOM05D003159 ORTHO05D003780 5.9e-172 608.2 327 89.0
Gohir.A11G250300 Gossypium hirsutum HOM05D003159 ORTHO05D003780 2.9e-171 605.9 414 74.2
Gohir.A09G017500 Gossypium hirsutum HOM05D003159 ORTHO05D003780 1.5e-170 603.6 411 74.2
Gorai.007G279300 Gossypium raimondii HOM05D003159 ORTHO05D003780 1.5e-170 603.6 478 67.6
Gohir.D11G260700 Gossypium hirsutum HOM05D003159 ORTHO05D003780 1.9e-170 603.2 478 67.4
GSVIVG01036258001 Vitis vinifera HOM05D003159 ORTHO05D003780 1.9e-170 603.2 327 88.4
QL01p030114 Quercus lobata HOM05D003159 ORTHO05D003780 4.2e-170 602.1 327 89.0
QL07p003261 Quercus lobata HOM05D003159 ORTHO05D003780 4.2e-170 602.1 327 89.0
TAR362G0530 Trochodendron aralioides HOM05D003159 ORTHO05D003780 7.2e-170 601.3 329 88.8
Dinv05722 Davidia involucrata HOM05D003159 ORTHO05D003780 9.4e-170 600.9 327 88.1
CiPaw.08G119500 Carya illinoinensis HOM05D003159 ORTHO05D003780 4.7e-169 598.6 327 88.7
Gorai.013G036100 Gossypium raimondii HOM05D003159 ORTHO05D003780 4.7e-169 598.6 414 73.4
Prupe.6G346800 Prunus persica HOM05D003159 ORTHO05D003780 4.7e-169 598.6 328 87.8
MD12G1244300 Malus domestica HOM05D003159 ORTHO05D003780 1.0e-168 597.4 329 87.5
THA.LOC104808027 Tarenaya hassleriana HOM05D003159 ORTHO05D003780 1.4e-168 597.0 327 87.8
CSS0035771 Camellia sinensis var. sinensis HOM05D003159 ORTHO05D003780 1.8e-168 596.7 326 87.4
RcHm_v2.0_Chr3g0450361 Rosa chinensis HOM05D003159 ORTHO05D003780 1.8e-168 596.7 322 90.4
MD04G1227600 Malus domestica HOM05D003159 ORTHO05D003780 3.0e-168 595.9 330 87.0
Potri.013G043500 Populus trichocarpa HOM05D003159 ORTHO05D003780 5.2e-168 595.1 327 87.5
Haze_04383 Corylus avellana HOM05D003159 ORTHO05D003780 8.8e-168 594.3 327 87.8
Gohir.D13G031700 Gossypium hirsutum HOM05D003159 ORTHO05D003780 8.8e-168 594.3 421 72.4
Nn3g19572 Nelumbo nucifera HOM05D003159 ORTHO05D003780 3.4e-167 592.4 327 87.8
TWI81G0941 Tripterygium wilfordii HOM05D003159 ORTHO05D003780 3.4e-167 592.4 326 87.4
FvH4_5g12790 Fragaria vesca HOM05D003159 ORTHO05D003780 5.7e-167 591.7 326 88.0
Hund02191 Selenicereus undatus HOM05D003159 ORTHO05D003780 1.3e-166 590.5 326 86.2
Ciclev10027983m.g Citrus clementina HOM05D003159 ORTHO05D003780 1.7e-166 590.1 327 86.2
Eucgr.J00270 Eucalyptus grandis HOM05D003159 ORTHO05D003780 3.7e-166 589.0 327 85.0
Lj5g0023348 Lotus japonicus HOM05D003159 ORTHO05D003780 4.8e-166 588.6 343 84.0
THA.LOC104799866 Tarenaya hassleriana HOM05D003159 ORTHO05D003780 1.8e-165 586.6 330 84.8
EL10Ac8g19239 Beta vulgaris HOM05D003159 ORTHO05D003780 2.4e-165 586.3 373 78.0
Hma1.2p1_0345F.1_g131280 Hydrangea macrophylla HOM05D003159 ORTHO05D003780 1.6e-164 583.6 328 86.6
PGR031G1742 Punica granatum HOM05D003159 ORTHO05D003780 2.0e-164 583.2 327 85.0
CAN.G143.64 Capsicum annuum HOM05D003159 ORTHO05D003780 1.7e-163 580.1 322 85.7
CANSAT54G0311 Cannabis sativa HOM05D003159 ORTHO05D003780 2.2e-163 579.7 327 85.0
Phvul.007G188800 Phaseolus vulgaris HOM05D003159 ORTHO05D003780 2.2e-163 579.7 326 85.0
Glyma.10G163700 Glycine max HOM05D003159 ORTHO05D003780 5.0e-163 578.6 326 84.7
BcaB01g03763 Brassica carinata HOM05D003159 ORTHO05D003780 6.5e-163 578.2 327 84.4
Cc02_g09140 Coffea canephora HOM05D003159 ORTHO05D003780 6.5e-163 578.2 323 86.4
A03p20800 Brassica napus HOM05D003159 ORTHO05D003780 1.5e-162 577.0 342 81.3
BraA03t11320Z Brassica rapa HOM05D003159 ORTHO05D003780 1.5e-162 577.0 342 81.3
Psat6g145160 Pisum sativum HOM05D003159 ORTHO05D003780 1.9e-162 576.6 326 85.0
Aqoxy6G02795 Aquilegia oxysepala HOM05D003159 ORTHO05D003780 2.5e-162 576.2 330 83.3
C03p24440 Brassica napus HOM05D003159 ORTHO05D003780 2.5e-162 576.2 326 84.4
VMungo0720G2291 Vigna mungo HOM05D003159 ORTHO05D003780 2.5e-162 576.2 323 85.4
Solyc11g006340.2 Solanum lycopersicum HOM05D003159 ORTHO05D003780 3.2e-162 575.9 322 84.8
BcaC01g05601 Brassica carinata HOM05D003159 ORTHO05D003780 5.5e-162 575.1 326 84.0
Ca_10033_v3 Cicer arietinum L. HOM05D003159 ORTHO05D003780 5.5e-162 575.1 337 83.4
Sp4g20070 Schrenkiella parvula HOM05D003159 ORTHO05D003780 5.5e-162 575.1 327 83.5
BolC3t14843H Brassica oleracea HOM05D003159 ORTHO05D003780 7.2e-162 574.7 326 84.0
Lalb_Chr06g0168161 Lupinus albus HOM05D003159 ORTHO05D003780 7.2e-162 574.7 326 84.0
AT2G37690 Arabidopsis thaliana HOM05D003159 ORTHO05D003780 9.4e-162 574.3 327 83.5
FAN18G4090 Fragaria x ananassa HOM05D003159 ORTHO05D003780 9.4e-162 574.3 342 83.0
CARHR131850 Cardamine hirsuta HOM05D003159 ORTHO05D003780 1.6e-161 573.5 375 75.2
Sc06g0010270 Simmondsia chinensis HOM05D003159 ORTHO05D003780 1.6e-161 573.5 330 82.4
arahy.Tifrunner.gnm1.ann1.N0IL4Q Arachis hypogaea HOM05D003159 ORTHO05D003780 2.1e-161 573.2 349 81.1
BolC4t28117H Brassica oleracea HOM05D003159 ORTHO05D003780 2.1e-161 573.2 327 83.8
PGSC0003DMG400000995 Solanum tuberosum HOM05D003159 ORTHO05D003780 2.1e-161 573.2 322 84.5
Peaxi162Scf00120g00723 Petunia axillaris HOM05D003159 ORTHO05D003780 2.7e-161 572.8 322 85.1
Sopen11g002240 Solanum pennellii HOM05D003159 ORTHO05D003780 3.6e-161 572.4 321 85.0
AL4G34620 Arabidopsis lyrata HOM05D003159 ORTHO05D003780 4.7e-161 572.0 326 84.0
Aa31sc70G90 Aethionema arabicum HOM05D003159 ORTHO05D003780 6.1e-161 571.6 327 83.2
Thhalv10016367m.g Eutrema salsugineum HOM05D003159 ORTHO05D003780 1.0e-160 570.9 469 64.6
Glyma.20G226300 Glycine max HOM05D003159 ORTHO05D003780 1.4e-160 570.5 323 84.2
Carub.0004s1964 Capsella rubella HOM05D003159 ORTHO05D003780 2.3e-160 569.7 326 83.4
BcaB06g29020 Brassica carinata HOM05D003159 ORTHO05D003780 3.0e-160 569.3 322 83.9
A04p28880 Brassica napus HOM05D003159 ORTHO05D003780 4.0e-160 568.9 322 84.2
AUR62027480 Chenopodium quinoa HOM05D003159 ORTHO05D003780 5.2e-160 568.5 322 83.9
BcaC02g07498 Brassica carinata HOM05D003159 ORTHO05D003780 6.8e-160 568.2 327 83.2
C04p66140 Brassica napus HOM05D003159 ORTHO05D003780 6.8e-160 568.2 327 83.2
Sabra13G0039800 Salix brachista HOM05D003159 ORTHO05D003780 6.8e-160 568.2 361 77.8
arahy.Tifrunner.gnm1.ann1.W48W00 Arachis hypogaea HOM05D003159 ORTHO05D003780 1.2e-159 567.4 337 83.1
BraA04t18362Z Brassica rapa HOM05D003159 ORTHO05D003780 1.2e-159 567.4 322 83.9
Actinidia06676 Actinidia chinensis HOM05D003159 ORTHO05D003780 2.6e-159 566.2 327 83.8
TPR.G33936 Trifolium pratense HOM05D003159 ORTHO05D003780 2.6e-159 566.2 326 83.4
Ah.09g228380 Amaranthus hybridus HOM05D003159 ORTHO05D003780 5.7e-159 565.1 327 82.9
Lalb_Chr21g0311061 Lupinus albus HOM05D003159 ORTHO05D003780 9.8e-159 564.3 326 82.2
Medtr1g080500 Medicago truncatula HOM05D003159 ORTHO05D003780 1.3e-158 563.9 326 82.8
ClCG11G008930 Citrullus lanatus HOM05D003159 ORTHO05D003780 1.7e-158 563.5 414 69.1
Migut.F01579 Erythranthe guttata HOM05D003159 ORTHO05D003780 1.7e-158 563.5 325 81.8
FAN12G0237 Fragaria x ananassa HOM05D003159 ORTHO05D003780 2.8e-158 562.8 389 73.3
TPR.G26626 Trifolium pratense HOM05D003159 ORTHO05D003780 3.7e-158 562.4 326 84.0
Aqoxy4G01990 Aquilegia oxysepala HOM05D003159 ORTHO05D003780 4.9e-158 562.0 331 81.6
SalBow8G0718 Salvia bowleyana HOM05D003159 ORTHO05D003780 6.3e-158 561.6 333 80.2
MSTRG.927 Avicennia marina HOM05D003159 ORTHO05D003780 3.1e-157 559.3 325 81.8
FAN08G2202 Fragaria x ananassa HOM05D003159 ORTHO05D003780 3.1e-157 559.3 384 74.5
CsaV3_2G033180 Cucumis sativus L. HOM05D003159 ORTHO05D003780 2.7e-156 556.2 330 80.3
MELO3C008089.2 Cucumis melo HOM05D003159 ORTHO05D003780 5.9e-156 555.1 330 80.6
Rhsim01G0186900 Rhododendron simsii HOM05D003159 ORTHO05D003780 7.7e-156 554.7 327 81.7
FAN18G4088 Fragaria x ananassa HOM05D003159 ORTHO05D003780 1.0e-155 554.3 384 73.7
vmacro20008 Vaccinium macrocarpon HOM05D003159 ORTHO05D003780 2.9e-155 552.7 350 77.1
DCAR_001864 Daucus carota HOM05D003159 ORTHO05D003780 8.6e-155 551.2 338 78.7
Sed0018461 Sechium edule HOM05D003159 ORTHO05D003780 8.6e-155 551.2 327 79.5
ECA248G3699 Erigeron canadensis HOM05D003159 ORTHO05D003780 1.1e-154 550.8 327 79.8
PSO541G5176 Papaver somniferum HOM05D003159 ORTHO05D003780 3.3e-154 549.3 329 80.2
HanXRQChr05g0152861 Helianthus annuus HOM05D003159 ORTHO05D003780 4.2e-154 548.9 337 78.0
vmacro19526 Vaccinium macrocarpon HOM05D003159 ORTHO05D003780 2.1e-153 546.6 359 75.2
PSO170G0868 Papaver somniferum HOM05D003159 ORTHO05D003780 1.8e-152 543.5 340 76.2
PSO170G3230 Papaver somniferum HOM05D003159 ORTHO05D003780 1.8e-152 543.5 340 76.2
PSO675G5476 Papaver somniferum HOM05D003159 ORTHO05D003780 5.2e-152 542.0 327 78.6
HanXRQChr04g0112121 Helianthus annuus HOM05D003159 ORTHO05D003780 1.3e-150 537.3 321 79.1
Rhsim05G0176200 Rhododendron simsii HOM05D003159 ORTHO05D003780 2.7e-148 529.6 394 68.8
unitig_22.g5684 Utricularia gibba HOM05D003159 ORTHO05D003780 4.6e-148 528.9 322 76.1
Nitab4.5_0001781g0080 Nicotiana tabacum HOM05D003159 ORTHO05D003780 2.9e-147 526.2 388 70.1
ATR0111G007 Amborella trichopoda HOM05D003159 ORTHO05D003780 6.6e-147 525.0 331 72.8
Os01g0199900 Oryza sativa ssp. japonica HOM05D003159 ORTHO05D003780 4.3e-146 522.3 328 72.9
HPP92_021777 Vanilla planifolia HOM05D003159 ORTHO05D003780 1.6e-145 520.4 322 76.1
SGA_v2.0_scaffold4G01959 Striga asiatica HOM05D003159 ORTHO05D003780 1.2e-143 514.2 329 77.2
CDE11G0603 Ceratophyllum demersum HOM05D003159 ORTHO05D003780 3.4e-143 512.7 303 79.5
MBI12_g21500_MAGBIO Magnolia biondii HOM05D003159 ORTHO05D003780 2.4e-141 506.5 341 74.8
Aa31LG8G11740 Aethionema arabicum HOM05D003159 ORTHO05D003780 2.0e-140 503.4 334 75.4
PSO782G2873 Papaver somniferum HOM05D003159 ORTHO05D003780 4.4e-135 485.7 309 74.8
Zm00001eb120570 Zea mays HOM05D003159 ORTHO05D003780 5.8e-135 485.3 303 74.9
Lj3C918G0 Lonicera japonica HOM05D003159 ORTHO05D003780 7.5e-135 485.0 340 72.1
Zm00001eb284760 Zea mays HOM05D003159 ORTHO05D003780 4.1e-133 479.2 303 73.9
Mapoly0046s0034 Marchantia polymorpha HOM05D003159 ORTHO05D003780 3.5e-132 476.1 320 70.6
CDE05G1140 Ceratophyllum demersum HOM05D003159 ORTHO05D003780 4.7e-129 465.7 292 76.4
FAN11G2158 Fragaria x ananassa HOM05D003159 ORTHO05D003780 4.0e-128 462.6 336 70.2
COL.COLO4_15406 Corchorus olitorius HOM05D003159 ORTHO05D003780 8.9e-128 461.5 413 62.0
Nitab4.5_0007901g0030 Nicotiana tabacum HOM05D003159 ORTHO05D003780 9.9e-127 458.0 346 67.9
AagrBONN_evm.TU.Sc2ySwM_368.1733 Anthoceros agrestis HOM05D003159 ORTHO05D003780 1.1e-125 454.5 322 66.8
CSS0018975 Camellia sinensis var. sinensis HOM05D003159 ORTHO05D003780 1.4e-125 454.1 326 71.2
SMO270G0125 Selaginella moellendorffii HOM05D003159 ORTHO05D003780 1.4e-125 454.1 317 66.6
Pp3c2_24240 Physcomitrium patens HOM05D003159 ORTHO05D003780 1.3e-123 447.6 318 67.3
CBR_g8948 Chara braunii HOM05D003159 ORTHO05D003780 3.9e-123 446.0 320 66.9
AUR62033998 Chenopodium quinoa HOM05D003159 ORTHO05D003780 6.8e-120 435.3 322 68.9
SMO358G0312 Selaginella moellendorffii HOM05D003159 ORTHO05D003780 5.1e-107 392.5 329 59.0
FAN20G0704 Fragaria x ananassa HOM05D003159 ORTHO05D003780 8.7e-99 365.2 257 71.6
Peaxi162Scf00135g01116 Petunia axillaris HOM05D003159 ORTHO05D003780 5.6e-98 362.5 245 74.7
Sabra19G0025800 Salix brachista HOM05D003159 ORTHO05D003780 7.4e-98 362.1 203 85.7
Cre12.g503300 Chlamydomonas reinhardtii HOM05D003159 ORTHO05D003780 2.4e-96 357.1 316 55.1
FAN12G4313 Fragaria x ananassa HOM05D003159 ORTHO05D003780 2.0e-95 354.0 196 86.7
PRCOL_00005277 Prasinoderma coloniale HOM05D003159 ORTHO05D003780 1.3e-89 334.7 322 54.7
MCO10G267 Micromonas commoda HOM05D003159 ORTHO05D003780 4.5e-87 326.2 303 50.5
DCAR_028952 Daucus carota HOM05D003159 ORTHO05D003780 1.1e-85 321.6 190 79.5
Lalb_Chr06g0166701 Lupinus albus HOM05D003159 ORTHO05D003780 2.2e-78 297.4 200 74.0
FAN02G3581 Fragaria x ananassa HOM05D001720 ORTHO05D001813 7.9e-76 288.9 257 61.9
Haze_20967 Corylus avellana HOM05D003159 ORTHO05D003780 1.1e-74 285.0 180 80.0
Atru.chr2.869 Acer truncatum HOM05D003159 ORTHO05D003780 2.0e-74 284.3 192 75.0
SHI06091 Sapria himalayana HOM05D003159 ORTHO05D003780 3.1e-72 276.9 179 72.6
CSS0009274 Camellia sinensis var. sinensis HOM05D003159 ORTHO05D003780 6.5e-70 269.2 173 76.9
SEGI_17525 Sequoiadendron giganteum HOM05D003159 ORTHO05D003780 2.5e-69 267.3 171 74.9
Cfa025150 Carpinus fangiana HOM05D003159 ORTHO05D003780 6.1e-68 262.7 318 46.2
Rhsim05G0177800 Rhododendron simsii HOM05D003159 ORTHO05D000029 7.9e-68 262.3 177 72.9
Ciclev10003992m.g Citrus clementina HOM05D003159 ORTHO05D003780 3.7e-57 226.9 205 58.0
FAN09G4428 Fragaria x ananassa HOM05D003159 ORTHO05D003780 3.7e-57 226.9 183 63.9
TPR.G10778 Trifolium pratense HOM05D003159 ORTHO05D003780 4.2e-53 213.4 125 81.6
CSS0027773 Camellia sinensis var. sinensis HOM05D003159 ORTHO05D003780 1.5e-50 204.9 182 61.5
DCAR_028953 Daucus carota HOM05D003159 ORTHO05D003780 4.1e-48 196.8 108 86.1
Nn1g02653 Nelumbo nucifera HOM05D003159 ORTHO05D003780 9.1e-48 195.7 109 87.2
SHI06090 Sapria himalayana HOM05D003159 ORTHO05D003780 5.9e-47 193.0 107 81.3
SEGI_37742 Sequoiadendron giganteum HOM05D003159 ORTHO05D003780 1.5e-45 188.3 117 76.9
AUR62033001 Chenopodium quinoa HOM05D003159 ORTHO05D044021 7.2e-45 186.0 161 62.1
Lalb_Chr06g0166731 Lupinus albus HOM05D003159 ORTHO05D003780 4.0e-43 180.3 133 68.4
Lsat_1_v5_gn_3_106720 Lactuca sativa HOM05D003159 ORTHO05D003780 4.4e-42 176.8 151 60.3
QL03p028499 Quercus lobata HOM05D003159 ORTHO05D003780 7.5e-42 176.0 112 75.9
SEGI_03130 Sequoiadendron giganteum HOM05D003159 ORTHO05D003780 9.8e-42 175.6 103 80.6
VMungo0720G3029 Vigna mungo HOM05D003159 ORTHO05D005582 4.9e-41 173.3 102 81.4
Lalb_Chr06g0166711 Lupinus albus HOM05D003159 ORTHO05D003780 5.4e-40 169.9 98 83.7
Lalb_Chr06g0166751 Lupinus albus HOM05D003159 ORTHO05D003780 5.4e-40 169.9 98 83.7
Lsat_1_v5_gn_9_121981 Lactuca sativa HOM05D003159 ORTHO05D003780 2.7e-39 167.5 89 88.8
RcHm_v2.0_Chr6g0278951 Rosa chinensis HOM05D003159 ORTHO05D003780 5.9e-39 166.4 118 71.2
Lalb_Chr06g0166741 Lupinus albus HOM05D003159 ORTHO05D003780 4.3e-37 160.2 89 83.1
FAN09G3226 Fragaria x ananassa HOM05D003159 ORTHO05D003780 3.6e-36 157.1 102 80.4
RcHm_v2.0_Chr7g0214531 Rosa chinensis HOM05D003159 ORTHO05D003780 4.9e-33 146.7 111 69.4
Atru.chr2.868 Acer truncatum HOM05D003159 ORTHO05D003780 1.3e-30 138.7 99 70.7
Nitab4.5_0000261g0140 Nicotiana tabacum HOM05D003159 ORTHO05D003780 4.3e-29 133.7 103 68.9
PGSC0003DMG400002182 Solanum tuberosum HOM05D003159 ORTHO05D003780 9.5e-29 132.5 75 81.3
Haze_27599 Corylus avellana HOM05D003159 ORTHO05D003780 9.2e-24 115.9 140 42.9
AUR62010228 Chenopodium quinoa HOM05D003159 ORTHO05D003780 9.8e-18 95.9 72 66.7
Nitab4.5_0001462g0060 Nicotiana tabacum HOM05D003159 ORTHO05D003780 3.9e-14 84.0 52 73.1
SEGI_11174 Sequoiadendron giganteum HOM05D003159 ORTHO05D003780 8.9e-11 72.8 47 68.1


User provided reference genes

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