Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc16.61 Carica papaya HOM05D002762 ORTHO05D008831 7.3e-228 793.5 386 100.0
Haze_01004 Corylus avellana HOM05D002762 ORTHO05D008831 6.3e-147 524.6 607 49.1
CSS0041967 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 5.5e-143 511.5 607 47.9
Thecc.04G271400 Theobroma cacao HOM05D002762 ORTHO05D008831 5.5e-143 511.5 607 49.4
QL06p006121 Quercus lobata HOM05D002762 ORTHO05D008831 9.4e-143 510.8 604 47.7
Prupe.1G147800 Prunus persica HOM05D002762 ORTHO05D008831 3.6e-142 508.8 508 52.6
Duzib212G0752 Durio zibethinus HOM05D002762 ORTHO05D008831 1.0e-141 507.3 602 48.8
COL.COLO4_13977 Corchorus olitorius HOM05D002762 ORTHO05D008831 2.6e-140 502.7 597 48.4
Duzib052G0147 Durio zibethinus HOM05D002762 ORTHO05D008831 3.3e-140 502.3 607 47.8
Gorai.006G255700 Gossypium raimondii HOM05D002762 ORTHO05D008831 1.3e-139 500.4 607 47.3
GSVIVG01017858001 Vitis vinifera HOM05D002762 ORTHO05D008831 1.3e-139 500.4 605 47.9
Gohir.D09G232800 Gossypium hirsutum HOM05D002762 ORTHO05D008831 1.7e-139 500.0 607 47.3
Actinidia40215 Actinidia chinensis HOM05D002762 ORTHO05D008831 8.2e-139 497.7 604 47.2
Rhsim04G0212200 Rhododendron simsii HOM05D002762 ORTHO05D008831 3.1e-138 495.7 602 47.0
Gohir.A09G231700 Gossypium hirsutum HOM05D002762 ORTHO05D008831 7.0e-138 494.6 607 46.8
Ciclev10004552m.g Citrus clementina HOM05D002762 ORTHO05D008831 1.2e-137 493.8 607 47.1
TWI53G0007 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 2.0e-137 493.0 607 47.8
TAR365G0003 Trochodendron aralioides HOM05D002762 ORTHO05D008831 5.0e-136 488.4 605 47.1
Manes.03G187600 Manihot esculenta HOM05D002762 ORTHO05D008831 4.2e-135 485.3 607 46.3
MBI19_g15847_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D008831 4.8e-131 471.9 606 46.0
CSS0031724 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 5.4e-130 468.4 586 46.8
MD16G1180200 Malus domestica HOM05D002762 ORTHO05D008831 1.6e-129 466.8 608 44.1
Sabra10G0012300 Salix brachista HOM05D002762 ORTHO05D008831 1.3e-128 463.8 612 44.8
CANSAT78G1603 Cannabis sativa HOM05D002762 ORTHO05D008831 2.9e-128 462.6 610 45.4
Nitab4.5_0000894g0020 Nicotiana tabacum HOM05D002762 ORTHO05D008831 5.0e-128 461.8 604 44.9
vmacro08246 Vaccinium macrocarpon HOM05D002762 ORTHO05D008831 5.0e-128 461.8 629 43.2
ClCG06G005650 Citrullus lanatus HOM05D002762 ORTHO05D008831 6.5e-128 461.5 603 43.9
Lj4g0021299 Lotus japonicus HOM05D002762 ORTHO05D008831 6.5e-128 461.5 603 44.1
Eucgr.F00974 Eucalyptus grandis HOM05D002762 ORTHO05D008831 1.5e-127 460.3 592 44.9
Phvul.003G097700 Phaseolus vulgaris HOM05D002762 ORTHO05D008831 1.5e-127 460.3 605 44.1
CiPaw.01G157200 Carya illinoinensis HOM05D002762 ORTHO05D008831 4.2e-127 458.8 573 46.4
TPR.G28123 Trifolium pratense HOM05D002762 ORTHO05D008831 4.2e-127 458.8 604 44.0
Solyc01g080360.3 Solanum lycopersicum HOM05D002762 ORTHO05D008831 5.5e-127 458.4 604 45.0
Potri.010G028600 Populus trichocarpa HOM05D002762 ORTHO05D008831 9.5e-127 457.6 612 44.6
Sopen01g032170 Solanum pennellii HOM05D002762 ORTHO05D008831 9.5e-127 457.6 604 44.7
RcHm_v2.0_Chr4g0419641 Rosa chinensis HOM05D002762 ORTHO05D008831 1.2e-126 457.2 613 44.5
Glyma.17G019900 Glycine max HOM05D002762 ORTHO05D008831 1.6e-126 456.8 604 44.5
CAN.G889.17 Capsicum annuum HOM05D002762 ORTHO05D008831 2.1e-126 456.4 604 44.5
Medtr4g118010 Medicago truncatula HOM05D002762 ORTHO05D008831 1.4e-125 453.8 604 42.9
DCAR_030580 Daucus carota HOM05D002762 ORTHO05D008831 2.3e-125 453.0 604 44.5
Psat4g031200 Pisum sativum HOM05D002762 ORTHO05D008831 4.0e-125 452.2 604 43.9
Cc03_g02810 Coffea canephora HOM05D002762 ORTHO05D008831 6.8e-125 451.4 604 44.0
FvH4_4g14000 Fragaria vesca HOM05D002762 ORTHO05D008831 6.8e-125 451.4 613 44.0
FAN12G0174 Fragaria x ananassa HOM05D002762 ORTHO05D008831 6.8e-125 451.4 613 44.0
PSO210G2175 Papaver somniferum HOM05D002762 ORTHO05D008831 8.9e-125 451.1 606 42.2
CsaV3_6G005500 Cucumis sativus L. HOM05D002762 ORTHO05D008831 1.5e-124 450.3 603 43.8
Lalb_Chr07g0177471 Lupinus albus HOM05D002762 ORTHO05D008831 1.5e-124 450.3 608 43.6
VMungo1215G1507 Vigna mungo HOM05D002762 ORTHO05D008831 7.5e-124 448.0 604 42.7
Ca_21567_v3 Cicer arietinum L. HOM05D002762 ORTHO05D008831 1.3e-123 447.2 604 44.2
MSTRG.3975 Avicennia marina HOM05D002762 ORTHO05D008831 1.7e-123 446.8 607 43.0
FAN22G0551 Fragaria x ananassa HOM05D002762 ORTHO05D008831 3.7e-123 445.7 613 43.4
Aqoxy5G00558 Aquilegia oxysepala HOM05D002762 ORTHO05D008831 8.3e-123 444.5 608 43.3
Nn4g26133 Nelumbo nucifera HOM05D002762 ORTHO05D008831 1.4e-122 443.7 592 44.4
HanXRQChr07g0192681 Helianthus annuus HOM05D002762 ORTHO05D008831 9.2e-122 441.0 603 43.8
ATR0626G043 Amborella trichopoda HOM05D002762 ORTHO05D008831 1.6e-121 440.3 611 42.6
FAN07G1246 Fragaria x ananassa HOM05D002762 ORTHO05D008831 2.0e-121 439.9 613 43.4
PSO832G0886 Papaver somniferum HOM05D002762 ORTHO05D008831 4.5e-121 438.7 606 41.6
Migut.G00243 Erythranthe guttata HOM05D002762 ORTHO05D008831 5.9e-121 438.3 607 42.0
arahy.Tifrunner.gnm1.ann1.08LYWQ Arachis hypogaea HOM05D002762 ORTHO05D008831 1.0e-120 437.6 605 43.5
Oeu035631.1 Olea europaea HOM05D002762 ORTHO05D008831 1.0e-120 437.6 602 42.9
Migut.G00245 Erythranthe guttata HOM05D002762 ORTHO05D008831 2.3e-120 436.4 607 41.8
Lsat_1_v5_gn_6_14820 Lactuca sativa HOM05D002762 ORTHO05D008831 2.5e-119 433.0 607 42.3
Aa31LG8G17700 Aethionema arabicum HOM05D002762 ORTHO05D008831 3.3e-119 432.6 614 42.5
THA.LOC104802606 Tarenaya hassleriana HOM05D002762 ORTHO05D008831 3.3e-119 432.6 613 43.7
EL10Ac8g18297 Beta vulgaris HOM05D002762 ORTHO05D008831 6.1e-118 428.3 612 43.0
Lj6A665G69 Lonicera japonica HOM05D002762 ORTHO05D008831 1.0e-117 427.6 639 41.6
Hund09035 Selenicereus undatus HOM05D002762 ORTHO05D008831 1.5e-116 423.7 606 42.2
Sc19g0004720 Simmondsia chinensis HOM05D002762 ORTHO05D008831 2.6e-116 422.9 610 43.3
CDE11G0719 Ceratophyllum demersum HOM05D002762 ORTHO05D008831 1.3e-115 420.6 587 43.4
Sed0022901 Sechium edule HOM05D002762 ORTHO05D008831 1.7e-115 420.2 580 42.8
AUR62033230 Chenopodium quinoa HOM05D002762 ORTHO05D008831 2.9e-115 419.5 609 41.9
HPP92_018399 Vanilla planifolia HOM05D002762 ORTHO05D008831 3.2e-114 416.0 606 41.6
ECA233G1162 Erigeron canadensis HOM05D002762 ORTHO05D008831 2.7e-113 412.9 578 43.4
Sed0011257 Sechium edule HOM05D002762 ORTHO05D008831 2.7e-113 412.9 602 41.0
SGA_v2.0_scaffold237G43848 Striga asiatica HOM05D002762 ORTHO05D008831 4.6e-113 412.1 609 40.2
Sp6g27240 Schrenkiella parvula HOM05D002762 ORTHO05D008831 3.0e-112 409.5 612 41.2
AUR62021313 Chenopodium quinoa HOM05D002762 ORTHO05D008831 1.1e-111 407.5 589 42.3
Nitab4.5_0000059g0110 Nicotiana tabacum HOM05D002762 ORTHO05D008831 3.3e-111 406.0 569 42.7
Peaxi162Scf00095g00610 Petunia axillaris HOM05D002762 ORTHO05D008831 3.3e-111 406.0 583 42.5
AL3G53900 Arabidopsis lyrata HOM05D002762 ORTHO05D008831 3.6e-110 402.5 611 39.9
arahy.Tifrunner.gnm1.ann1.ZAIR7G Arachis hypogaea HOM05D002762 ORTHO05D008831 4.7e-110 402.1 595 42.0
AT2G20790 Arabidopsis thaliana HOM05D002762 ORTHO05D008831 1.1e-109 401.0 607 40.4
CARHR111460 Cardamine hirsuta HOM05D002762 ORTHO05D008831 2.3e-109 399.8 608 41.0
A03p08030 Brassica napus HOM05D002762 ORTHO05D008831 1.1e-106 391.0 610 39.0
BraA03t10129Z Brassica rapa HOM05D002762 ORTHO05D008831 1.1e-106 391.0 610 39.0
C03p09290 Brassica napus HOM05D002762 ORTHO05D008831 1.4e-106 390.6 608 39.0
BolC3t13425H Brassica oleracea HOM05D002762 ORTHO05D008831 4.1e-106 389.0 608 39.1
Thhalv10003762m.g Eutrema salsugineum HOM05D002762 ORTHO05D008831 2.3e-104 383.3 607 38.9
Zm00001eb410820 Zea mays HOM05D002762 ORTHO05D008831 1.9e-95 353.6 602 36.2
unitig_899.g14405 Utricularia gibba HOM05D002762 ORTHO05D008831 1.9e-90 337.0 576 36.3
Carub.0003s3536 Capsella rubella HOM05D002762 ORTHO05D008831 8.1e-86 321.6 543 36.6
MELO3C021387.2 Cucumis melo HOM05D002762 ORTHO05D008831 1.4e-85 320.9 194 78.4
Eucgr.B01191 Eucalyptus grandis HOM05D002762 ORTHO05D008831 3.1e-77 293.1 183 74.3
Ah.09g229990 Amaranthus hybridus HOM05D002762 ORTHO05D008831 4.6e-73 279.3 194 69.6
MD13G1179200 Malus domestica HOM05D002762 ORTHO05D008831 1.1e-71 274.6 206 66.5
Cfa015544 Carpinus fangiana HOM05D002762 ORTHO05D008831 1.9e-71 273.9 176 74.4
SMO115G0172 Selaginella moellendorffii HOM05D002762 ORTHO05D008831 9.6e-71 271.6 612 31.5
Mapoly0055s0097 Marchantia polymorpha HOM05D002762 ORTHO05D008831 2.1e-70 270.4 624 32.1
Nn1g08335 Nelumbo nucifera HOM05D002762 ORTHO05D008831 4.8e-70 269.2 181 70.7
Actinidia23461 Actinidia chinensis HOM05D002762 ORTHO05D008831 1.7e-67 260.8 176 70.5
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 1.6e-65 254.2 457 37.4
AagrBONN_evm.TU.Sc2ySwM_368.1411 Anthoceros agrestis HOM05D002762 ORTHO05D008831 3.9e-64 249.6 597 30.0
SEGI_30175 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 3.8e-59 233.0 492 33.5
SEGI_25743 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 7.9e-57 225.3 161 67.1
BcaB01g05249 Brassica carinata HOM05D002762 ORTHO05D008831 4.8e-54 216.1 182 59.3
Os12g0528300 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D008831 3.9e-48 196.4 173 57.2
Pp3c2_12250 Physcomitrium patens HOM05D002762 ORTHO05D008831 2.2e-46 190.7 611 26.4
MD12G1098700 Malus domestica HOM05D002762 ORTHO05D008831 1.1e-45 188.3 162 59.3
SEGI_28752 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 1.3e-35 154.8 128 58.6
CBR_g19730 Chara braunii HOM05D002762 ORTHO05D008831 3.3e-31 140.2 217 38.2
Actinidia23460 Actinidia chinensis HOM05D002762 ORTHO05D030920 8.2e-22 109.0 58 84.5
COL.COLO4_28661 Corchorus olitorius HOM05D002762 ORTHO05D008831 4.2e-18 96.7 90 57.8
Glyma.07G254400 Glycine max HOM05D002762 ORTHO05D004643 3.6e-09 67.0 47 68.1
TWI09G1537 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 6.1e-09 66.2 40 80.0
FAN17G1900 Fragaria x ananassa HOM05D002762 ORTHO05D030920 1.2e-07 62.0 63 54.0


User provided reference genes

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