Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc153.15 Carica papaya HOM05D006586 ORTHO05D008254 9.6e-55 216.5 101 100.0
Thecc.03G024500 Theobroma cacao HOM05D006586 ORTHO05D008254 2.9e-27 125.2 71 76.1
Manes.14G062950 Manihot esculenta HOM05D006586 ORTHO05D008254 6.5e-27 124.0 71 76.1
Cfa019173 Carpinus fangiana HOM05D006586 ORTHO05D008254 8.5e-27 123.6 71 74.6
Sabra15G0072500 Salix brachista HOM05D006586 ORTHO05D008254 8.5e-27 123.6 71 76.1
Prupe.5G169900 Prunus persica HOM05D006586 ORTHO05D008254 1.4e-26 122.9 71 74.6
Potri.015G080400 Populus trichocarpa HOM05D006586 ORTHO05D008254 3.2e-26 121.7 71 74.6
Haze_07550 Corylus avellana HOM05D006586 ORTHO05D008254 4.2e-26 121.3 71 73.2
MD14G1175900 Malus domestica HOM05D006586 ORTHO05D008254 4.2e-26 121.3 71 74.6
Sabra15G0104600 Salix brachista HOM05D006586 ORTHO05D008254 4.2e-26 121.3 71 74.6
QL10p008791 Quercus lobata HOM05D006586 ORTHO05D008254 1.2e-25 119.8 71 74.6
RcHm_v2.0_Chr7g0193061 Rosa chinensis HOM05D006586 ORTHO05D008254 1.2e-25 119.8 71 71.8
Ciclev10019926m.g Citrus clementina HOM05D006586 ORTHO05D008254 2.7e-25 118.6 72 75.0
FAN04G1931 Fragaria x ananassa HOM05D006586 ORTHO05D008254 3.6e-25 118.2 71 70.4
Peaxi162Scf00089g01633 Petunia axillaris HOM05D006586 ORTHO05D008254 3.6e-25 118.2 71 71.8
Dinv20623 Davidia involucrata HOM05D006586 ORTHO05D008254 4.6e-25 117.9 71 69.0
Solyc03g112600.4 Solanum lycopersicum HOM05D006586 ORTHO05D008254 6.1e-25 117.5 71 70.4
Nn4g22672 Nelumbo nucifera HOM05D006586 ORTHO05D008254 7.9e-25 117.1 71 67.6
Hund09455 Selenicereus undatus HOM05D006586 ORTHO05D008254 7.9e-25 117.1 70 72.9
FvH4_5g05750 Fragaria vesca HOM05D006586 ORTHO05D008254 1.0e-24 116.7 71 70.4
FAN18G2086 Fragaria x ananassa HOM05D006586 ORTHO05D008254 1.0e-24 116.7 71 70.4
Sopen03g031690 Solanum pennellii HOM05D006586 ORTHO05D008254 1.4e-24 116.3 71 69.0
PGSC0003DMG400018168 Solanum tuberosum HOM05D006586 ORTHO05D008254 1.8e-24 115.9 71 69.0
Oeu036011.1 Olea europaea HOM05D006586 ORTHO05D008254 2.3e-24 115.5 71 69.0
Atru.chr9.2534_Atru.chr9.2535 Acer truncatum HOM05D006586 ORTHO05D008254 3.9e-24 114.8 71 70.4
CSS0037952 Camellia sinensis var. sinensis HOM05D006586 ORTHO05D008254 5.1e-24 114.4 71 69.0
CiPaw.11G023000 Carya illinoinensis HOM05D006586 ORTHO05D008254 6.7e-24 114.0 71 70.4
Nitab4.5_0006452g0010 Nicotiana tabacum HOM05D006586 ORTHO05D008254 6.7e-24 114.0 71 66.2
PGR083G0458 Punica granatum HOM05D006586 ORTHO05D008254 8.8e-24 113.6 71 66.2
Aqoxy3G02831 Aquilegia oxysepala HOM05D006586 ORTHO05D008254 1.1e-23 113.2 71 66.2
ClCG06G017160 Citrullus lanatus HOM05D006586 ORTHO05D008254 1.1e-23 113.2 71 69.0
COL.COLO4_30118 Corchorus olitorius HOM05D006586 ORTHO05D008254 1.1e-23 113.2 71 69.0
MELO3C026280.2 Cucumis melo HOM05D006586 ORTHO05D008254 2.0e-23 112.5 71 69.0
CsaV3_1G001320 Cucumis sativus L. HOM05D006586 ORTHO05D008254 2.0e-23 112.5 71 69.0
Nitab4.5_0001284g0040 Nicotiana tabacum HOM05D006586 ORTHO05D008254 2.0e-23 112.5 71 63.4
TAR371G0860 Trochodendron aralioides HOM05D006586 ORTHO05D008254 2.5e-23 112.1 71 67.6
CAN.G1166.29 Capsicum annuum HOM05D006586 ORTHO05D008254 5.7e-23 110.9 71 66.2
Migut.O00130 Erythranthe guttata HOM05D006586 ORTHO05D008254 5.7e-23 110.9 71 64.8
MSTRG.23151 Avicennia marina HOM05D006586 ORTHO05D008254 7.4e-23 110.5 71 64.8
Ah.02g110650 Amaranthus hybridus HOM05D006586 ORTHO05D008254 1.3e-22 109.8 70 64.3
Sc10g0010150 Simmondsia chinensis HOM05D006586 ORTHO05D008254 1.3e-22 109.8 69 65.2
Actinidia19342 Actinidia chinensis HOM05D006586 ORTHO05D008254 1.7e-22 109.4 71 64.8
PSO832G2003 Papaver somniferum HOM05D006586 ORTHO05D008254 2.2e-22 109.0 71 64.8
AUR62008177 Chenopodium quinoa HOM05D006586 ORTHO05D008254 2.8e-22 108.6 70 65.7
Eucgr.B00243 Eucalyptus grandis HOM05D006586 ORTHO05D008254 3.7e-22 108.2 71 64.8
Gohir.A12G272800 Gossypium hirsutum HOM05D006586 ORTHO05D008254 3.7e-22 108.2 71 69.0
SalBow5G1744 Salvia bowleyana HOM05D006586 ORTHO05D008254 3.7e-22 108.2 71 66.2
SGA_v2.0_scaffold25G10812 Striga asiatica HOM05D006586 ORTHO05D008254 3.7e-22 108.2 71 63.4
Lsat_1_v5_gn_4_75921 Lactuca sativa HOM05D006586 ORTHO05D008254 4.8e-22 107.8 71 63.4
GSVIVG01007692001 Vitis vinifera HOM05D006586 ORTHO05D008254 6.3e-22 107.5 71 66.2
Duzib205G0761 Durio zibethinus HOM05D006586 ORTHO05D008254 8.2e-22 107.1 71 64.8
Cc04_g12530 Coffea canephora HOM05D006586 ORTHO05D008254 1.4e-21 106.3 71 59.2
Gorai.008G293900 Gossypium raimondii HOM05D006586 ORTHO05D008254 1.4e-21 106.3 71 67.6
Rhsim08G0174900 Rhododendron simsii HOM05D006586 ORTHO05D008254 1.8e-21 105.9 71 63.4
Gohir.D12G273500 Gossypium hirsutum HOM05D006586 ORTHO05D008254 2.4e-21 105.5 71 67.6
SalBow5G1232 Salvia bowleyana HOM05D006586 ORTHO05D008254 2.4e-21 105.5 71 64.8
vmacro19416 Vaccinium macrocarpon HOM05D006586 ORTHO05D008254 2.4e-21 105.5 74 56.8
EL10Ac5g10701 Beta vulgaris HOM05D006586 ORTHO05D008254 3.1e-21 105.1 70 62.9
Lj9C445T6 Lonicera japonica HOM05D006586 ORTHO05D008254 4.1e-21 104.8 72 63.9
MBI16_g14603_MAGBIO Magnolia biondii HOM05D006586 ORTHO05D008254 5.3e-21 104.4 71 60.6
MBI16_g23863_MAGBIO Magnolia biondii HOM05D006586 ORTHO05D008254 5.3e-21 104.4 71 60.6
PSO063G4773 Papaver somniferum HOM05D006586 ORTHO05D008254 5.3e-21 104.4 71 64.8
SHI17138 Sapria himalayana HOM05D006586 ORTHO05D008254 5.3e-21 104.4 71 64.8
Psat5g115280 Pisum sativum HOM05D006586 ORTHO05D008254 6.9e-21 104.0 72 65.3
AUR62028758 Chenopodium quinoa HOM05D006586 ORTHO05D008254 1.5e-20 102.8 69 63.8
CANSAT64G0258 Cannabis sativa HOM05D006586 ORTHO05D008254 2.6e-20 102.1 71 63.4
Sp2g26210 Schrenkiella parvula HOM05D006586 ORTHO05D008254 3.4e-20 101.7 71 60.6
Phvul.009G175900 Phaseolus vulgaris HOM05D006586 ORTHO05D008254 5.9e-20 100.9 73 63.0
Aa31LG11G590 Aethionema arabicum HOM05D006586 ORTHO05D008254 7.7e-20 100.5 71 59.2
Lj1g0001085 Lotus japonicus HOM05D006586 ORTHO05D008254 7.7e-20 100.5 72 62.5
AL8G40110 Arabidopsis lyrata HOM05D006586 ORTHO05D008254 1.0e-19 100.1 71 57.7
DCAR_016036 Daucus carota HOM05D006586 ORTHO05D008254 1.0e-19 100.1 72 59.7
BcaC04g23364 Brassica carinata HOM05D006586 ORTHO05D008254 2.2e-19 99.0 71 59.2
C09p09140 Brassica napus HOM05D006586 ORTHO05D008254 2.2e-19 99.0 71 59.2
BolC9t53826H Brassica oleracea HOM05D006586 ORTHO05D008254 2.2e-19 99.0 71 59.2
HPP92_023397 Vanilla planifolia HOM05D006586 ORTHO05D008254 3.8e-19 98.2 71 57.7
ATR1152G085 Amborella trichopoda HOM05D006586 ORTHO05D008254 5.0e-19 97.8 71 54.9
BcaB04g19943 Brassica carinata HOM05D006586 ORTHO05D008254 5.0e-19 97.8 71 59.2
AT5G63080 Arabidopsis thaliana HOM05D006586 ORTHO05D008254 6.5e-19 97.4 71 56.3
Thhalv10004134m.g Eutrema salsugineum HOM05D006586 ORTHO05D008254 8.5e-19 97.1 71 60.6
A09p08080 Brassica napus HOM05D006586 ORTHO05D008254 1.4e-18 96.3 71 56.3
BraA09t36459Z Brassica rapa HOM05D006586 ORTHO05D008254 1.4e-18 96.3 71 56.3
Medtr3g077420 Medicago truncatula HOM05D006586 ORTHO05D008254 1.4e-18 96.3 70 64.3
Carub.0008s2381 Capsella rubella HOM05D006586 ORTHO05D008254 1.9e-18 95.9 71 60.6
THA.LOC104821484 Tarenaya hassleriana HOM05D006586 ORTHO05D008254 1.9e-18 95.9 71 60.6
HanXRQChr11g0348321 Helianthus annuus HOM05D006586 ORTHO05D008254 3.2e-18 95.1 71 54.9
VMungo1309G1735 Vigna mungo HOM05D006586 ORTHO05D008254 3.2e-18 95.1 71 60.6
CDE04G2890 Ceratophyllum demersum HOM05D006586 ORTHO05D008254 4.2e-18 94.7 71 62.0
FAN13G1600 Fragaria x ananassa HOM05D006586 ORTHO05D008254 1.6e-17 92.8 71 62.0
TPR.G28722 Trifolium pratense HOM05D006586 ORTHO05D008254 3.6e-17 91.7 72 58.3
Glyma.04G185900 Glycine max HOM05D006586 ORTHO05D008254 7.9e-17 90.5 71 59.2
Lalb_Chr11g0070371 Lupinus albus HOM05D006586 ORTHO05D008254 1.4e-16 89.7 73 54.8
SEGI_41391 Sequoiadendron giganteum HOM05D006586 ORTHO05D008254 3.9e-16 88.2 69 53.6
unitig_22.g6289 Utricularia gibba HOM05D006586 ORTHO05D008254 1.1e-15 86.7 71 50.7
arahy.Tifrunner.gnm1.ann1.Y9SFAP Arachis hypogaea HOM05D006586 ORTHO05D008254 1.3e-14 83.2 67 56.7
arahy.Tifrunner.gnm1.ann1.BDIM58 Arachis hypogaea HOM05D006586 ORTHO05D008254 1.7e-14 82.8 67 56.7
arahy.Tifrunner.gnm1.ann1.DN8DE7 Arachis hypogaea HOM05D006586 ORTHO05D008254 1.7e-14 82.8 67 56.7
Sed0000603 Sechium edule HOM05D006586 ORTHO05D008254 1.4e-13 79.7 43 74.4
SMO141G0010 Selaginella moellendorffii HOM05D006586 ORTHO05D008254 2.0e-12 75.9 69 46.4
Mapoly0108s0029 Marchantia polymorpha HOM05D006586 ORTHO05D008254 5.0e-11 71.2 69 40.6
CBR_g49886 Chara braunii HOM05D006586 ORTHO05D008254 2.5e-10 68.9 69 37.7
Zm00001eb342240 Zea mays HOM05D006586 ORTHO05D008254 3.2e-10 68.6 72 44.4
AagrBONN_evm.TU.Sc2ySwM_344.3069 Anthoceros agrestis HOM05D006586 ORTHO05D008254 2.3e-08 62.4 69 39.1


User provided reference genes

Program Settings