Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc147.29 Carica papaya HOM05D006587 ORTHO05D008487 7.7e-186 653.7 332 100.0
Cfa015608 Carpinus fangiana HOM05D006587 ORTHO05D006035 1.2e-109 400.6 270 75.9
GSVIVG01017920001 Vitis vinifera HOM05D006587 ORTHO05D008487 2.5e-107 392.9 297 68.0
Prupe.1G154500 Prunus persica HOM05D006587 ORTHO05D008487 3.2e-107 392.5 269 73.6
Manes.03G181700 Manihot esculenta HOM05D006587 ORTHO05D008487 9.3e-107 391.0 236 82.6
TWI73G1280 Tripterygium wilfordii HOM05D006587 ORTHO05D008487 1.2e-106 390.6 277 70.8
Atru.chr4.2522 Acer truncatum HOM05D006587 ORTHO05D008487 1.6e-106 390.2 302 68.2
MD16G1187700 Malus domestica HOM05D006587 ORTHO05D008487 2.7e-106 389.4 296 68.9
CiPaw.02G094600 Carya illinoinensis HOM05D006587 ORTHO05D008487 3.6e-106 389.0 299 68.9
Actinidia23494 Actinidia chinensis HOM05D006587 ORTHO05D008487 1.0e-105 387.5 237 81.0
Potri.008G149800 Populus trichocarpa HOM05D006587 ORTHO05D008487 2.3e-105 386.3 238 81.5
Sabra08G0113900 Salix brachista HOM05D006587 ORTHO05D008487 3.0e-105 386.0 238 81.1
CSS0008441 Camellia sinensis var. sinensis HOM05D006587 ORTHO05D008487 3.9e-105 385.6 238 80.7
QL06p003535 Quercus lobata HOM05D006587 ORTHO05D008487 1.1e-104 384.0 246 76.8
Thecc.04G226500 Theobroma cacao HOM05D006587 ORTHO05D008487 1.9e-104 383.3 239 79.9
TAR362G0294 Trochodendron aralioides HOM05D006587 ORTHO05D008487 1.9e-104 383.3 239 77.0
Dinv38415 Davidia involucrata HOM05D006587 ORTHO05D008487 4.3e-104 382.1 269 72.9
Ciclev10005176m.g Citrus clementina HOM05D006587 ORTHO05D008487 5.7e-104 381.7 304 67.4
THA.LOC104818820 Tarenaya hassleriana HOM05D006587 ORTHO05D008487 2.2e-103 379.8 234 80.3
Gohir.A01G023600 Gossypium hirsutum HOM05D006587 ORTHO05D008487 2.8e-103 379.4 299 66.6
Hma1.2p1_0511F.1_g168960 Hydrangea macrophylla HOM05D006587 ORTHO05D008487 6.3e-103 378.3 305 65.2
Rhsim04G0204300 Rhododendron simsii HOM05D006587 ORTHO05D008487 8.2e-103 377.9 236 78.8
MD13G1186800 Malus domestica HOM05D006587 ORTHO05D008487 1.4e-102 377.1 235 78.7
ECA236G2554 Erigeron canadensis HOM05D006587 ORTHO05D008487 3.4e-101 372.5 234 79.1
Actinidia40165 Actinidia chinensis HOM05D006587 ORTHO05D008487 4.5e-101 372.1 307 67.1
Eucgr.H03560 Eucalyptus grandis HOM05D006587 ORTHO05D008487 7.7e-101 371.3 235 76.6
PGR004G2885 Punica granatum HOM05D006587 ORTHO05D008487 2.9e-100 369.4 302 66.2
CANSAT78G1956 Cannabis sativa HOM05D006587 ORTHO05D008487 3.8e-100 369.0 288 67.0
FAN07G2036 Fragaria x ananassa HOM05D006587 ORTHO05D008487 3.8e-100 369.0 299 66.2
Gorai.002G024100 Gossypium raimondii HOM05D006587 ORTHO05D008487 5.0e-100 368.6 299 65.2
Gohir.D01G021600 Gossypium hirsutum HOM05D006587 ORTHO05D008487 6.5e-100 368.2 299 64.9
Solyc01g079710.3 Solanum lycopersicum HOM05D006587 ORTHO05D008487 1.9e-99 366.7 299 67.2
TAR633G1367 Trochodendron aralioides HOM05D006587 ORTHO05D008487 2.5e-99 366.3 245 74.3
FAN12G2172 Fragaria x ananassa HOM05D006587 ORTHO05D006391 5.5e-99 365.2 260 70.0
Sopen01g031480 Solanum pennellii HOM05D006587 ORTHO05D008487 5.5e-99 365.2 299 66.9
FAN22G2243 Fragaria x ananassa HOM05D000104 ORTHO05D006391 7.2e-99 364.8 234 75.6
RcHm_v2.0_Chr4g0417131 Rosa chinensis HOM05D006587 ORTHO05D008487 3.6e-98 362.5 299 65.9
Sc19g0004360 Simmondsia chinensis HOM05D006587 ORTHO05D008487 3.6e-98 362.5 296 64.5
Thhalv10013731m.g Eutrema salsugineum HOM05D006587 ORTHO05D008487 4.7e-98 362.1 253 73.5
ClCG05G005300 Citrullus lanatus HOM05D006587 ORTHO05D008487 2.3e-97 359.8 304 65.1
Nitab4.5_0000144g0120 Nicotiana tabacum HOM05D006587 ORTHO05D008487 2.3e-97 359.8 299 64.9
Potri.010G091400 Populus trichocarpa HOM05D006587 ORTHO05D008487 3.0e-97 359.4 301 66.4
BolC9t58560H Brassica oleracea HOM05D006587 ORTHO05D008487 5.1e-97 358.6 238 76.1
HanXRQChr13g0400281 Helianthus annuus HOM05D006587 ORTHO05D008487 5.1e-97 358.6 282 68.1
Sp6g25120 Schrenkiella parvula HOM05D006587 ORTHO05D008487 5.1e-97 358.6 235 76.6
MELO3C006549.2 Cucumis melo HOM05D006587 ORTHO05D008487 8.8e-97 357.8 301 64.8
CsaV3_3G013530 Cucumis sativus L. HOM05D006587 ORTHO05D008487 1.1e-96 357.5 303 64.4
BcaB08g36587 Brassica carinata HOM05D006587 ORTHO05D008487 1.5e-96 357.1 235 75.3
Lsat_1_v5_gn_9_80941 Lactuca sativa HOM05D006587 ORTHO05D008487 1.5e-96 357.1 246 74.4
BcaC04g18580 Brassica carinata HOM05D006587 ORTHO05D008487 2.0e-96 356.7 238 75.6
C09p56970 Brassica napus HOM05D006587 ORTHO05D008487 2.0e-96 356.7 238 75.6
AT5G19300 Arabidopsis thaliana HOM05D006587 ORTHO05D008487 2.6e-96 356.3 260 71.2
Carub.0006s1763 Capsella rubella HOM05D006587 ORTHO05D008487 4.4e-96 355.5 234 75.6
AL6G30780 Arabidopsis lyrata HOM05D006587 ORTHO05D008487 7.4e-96 354.8 234 75.6
Sed0010167 Sechium edule HOM05D006587 ORTHO05D008487 7.4e-96 354.8 278 68.3
DCAR_002398 Daucus carota HOM05D006587 ORTHO05D008487 2.2e-95 353.2 237 74.7
CARHR193670 Cardamine hirsuta HOM05D006587 ORTHO05D008487 2.8e-95 352.8 235 75.3
CAN.G69.11 Capsicum annuum HOM05D006587 ORTHO05D008487 6.3e-95 351.7 300 64.7
VMungo0720G0184 Vigna mungo HOM05D006587 ORTHO05D008487 1.8e-94 350.1 235 74.9
Cc03_g03390 Coffea canephora HOM05D006587 ORTHO05D008487 2.4e-94 349.7 300 64.0
MSTRG.24750 Avicennia marina HOM05D006587 ORTHO05D008487 4.1e-94 349.0 285 64.9
PGSC0003DMG400008999 Solanum tuberosum HOM05D006587 ORTHO05D008487 4.1e-94 349.0 333 59.8
Glyma.20G143100 Glycine max HOM05D006587 ORTHO05D008487 6.9e-94 348.2 299 65.2
Lj5g0006939 Lotus japonicus HOM05D006587 ORTHO05D008487 1.5e-93 347.1 235 73.6
A10p20380 Brassica napus HOM05D006587 ORTHO05D008487 2.6e-93 346.3 234 73.5
Medtr1g105065 Medicago truncatula HOM05D006587 ORTHO05D008487 3.4e-93 345.9 299 65.2
Lalb_Chr06g0164781 Lupinus albus HOM05D006587 ORTHO05D008487 4.5e-93 345.5 277 65.7
PSO302G0285 Papaver somniferum HOM05D006587 ORTHO05D008487 4.5e-93 345.5 237 71.3
Ca_10966_v3 Cicer arietinum L. HOM05D006587 ORTHO05D008487 1.7e-92 343.6 235 72.3
Phvul.007G053900 Phaseolus vulgaris HOM05D006587 ORTHO05D008487 1.7e-92 343.6 237 72.2
Migut.N00169 Erythranthe guttata HOM05D006587 ORTHO05D008487 2.9e-92 342.8 239 71.1
Psat6g209880 Pisum sativum HOM05D006587 ORTHO05D008487 5.0e-92 342.0 302 64.2
Haze_00934 Corylus avellana HOM05D006587 ORTHO05D008487 6.5e-92 341.7 296 63.2
BraA10t44108Z Brassica rapa HOM05D006587 ORTHO05D008487 1.1e-91 340.9 314 61.8
PSO170G4636 Papaver somniferum HOM05D006587 ORTHO05D008487 1.9e-91 340.1 237 70.5
Aa31LG11G10390 Aethionema arabicum HOM05D006587 ORTHO05D008487 2.5e-91 339.7 249 71.5
TPR.G5533 Trifolium pratense HOM05D006587 ORTHO05D008487 2.5e-91 339.7 299 62.9
SalBow5G2730 Salvia bowleyana HOM05D006587 ORTHO05D008487 5.5e-91 338.6 303 63.0
SalBow5G0644 Salvia bowleyana HOM05D006587 ORTHO05D008487 1.2e-90 337.4 303 63.0
arahy.Tifrunner.gnm1.ann1.G9UJER Arachis hypogaea HOM05D006587 ORTHO05D008487 1.4e-89 334.0 237 72.2
arahy.Tifrunner.gnm1.ann1.HZWC9V Arachis hypogaea HOM05D006587 ORTHO05D008487 1.8e-89 333.6 237 72.2
Ah.13g074000 Amaranthus hybridus HOM05D006587 ORTHO05D008487 8.8e-89 331.3 235 68.5
FAN17G1856 Fragaria x ananassa HOM05D000104 ORTHO05D006391 1.5e-88 330.5 306 61.1
MBI17_g12493_MAGBIO Magnolia biondii HOM05D006587 ORTHO05D008487 4.4e-88 328.9 212 72.6
HPP92_010726 Vanilla planifolia HOM05D006587 ORTHO05D008487 1.3e-87 327.4 241 66.8
Hma1.2p1_0511F.1_g168950 Hydrangea macrophylla HOM05D006587 ORTHO05D008487 1.1e-86 324.3 219 72.1
ATR0626G244 Amborella trichopoda HOM05D006587 ORTHO05D008487 5.3e-86 322.0 258 63.6
Sabra10G0051900 Salix brachista HOM05D006587 ORTHO05D008487 5.3e-86 322.0 198 80.3
SGA_v2.0_scaffold10G05110 Striga asiatica HOM05D006587 ORTHO05D008487 1.2e-85 320.9 294 59.9
EL10As3g23313 Beta vulgaris HOM05D006587 ORTHO05D008487 5.9e-85 318.5 296 58.4
Os04g0244500 Oryza sativa ssp. japonica HOM05D006587 ORTHO05D008487 1.3e-84 317.4 234 68.8
Peaxi162Scf01336g00122 Petunia axillaris HOM05D006587 ORTHO05D008487 8.5e-84 314.7 300 59.7
Dinv44504 Davidia involucrata HOM05D006587 ORTHO05D008487 1.6e-82 310.5 176 83.5
Aqoxy2G03329 Aquilegia oxysepala HOM05D006587 ORTHO05D008487 4.7e-82 308.9 283 57.6
AUR62043415 Chenopodium quinoa HOM05D006587 ORTHO05D008487 1.1e-78 297.7 212 67.5
Lj3A741G38 Lonicera japonica HOM05D006587 ORTHO05D008487 1.9e-75 287.0 196 74.0
Nitab4.5_0000180g0030 Nicotiana tabacum HOM05D006587 ORTHO05D008487 1.9e-75 287.0 299 56.2
CSS0044999 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D006391 9.8e-72 274.6 254 57.9
CSS0022730 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D006391 2.2e-71 273.5 310 52.3
Zm00001eb373340 Zea mays HOM05D006587 ORTHO05D008487 5.4e-70 268.9 208 66.3
FvH4_4g14960 Fragaria vesca HOM05D006587 ORTHO05D008487 2.8e-63 246.5 168 73.2
SMO364G0578 Selaginella moellendorffii HOM05D006587 ORTHO05D008487 1.3e-60 237.7 240 51.7
CDE05G0907 Ceratophyllum demersum HOM05D006587 ORTHO05D008487 6.6e-60 235.3 169 69.8
Mapoly0049s0075 Marchantia polymorpha HOM05D006587 ORTHO05D008487 8.6e-60 235.0 248 48.0
Duzib151G0305 Durio zibethinus HOM05D006587 ORTHO05D008487 1.0e-57 228.0 146 80.1
Pp3c7_20660 Physcomitrium patens HOM05D006587 ORTHO05D008487 6.8e-57 225.3 236 51.3
Oeu040660.1 Olea europaea HOM05D006587 ORTHO05D008487 6.4e-55 218.8 214 59.3
PRCOL_00002662 Prasinoderma coloniale HOM05D006587 ORTHO05D008487 3.5e-53 213.0 260 45.0
unitig_899.g15640 Utricularia gibba HOM05D006587 ORTHO05D008487 1.3e-52 211.1 259 49.4
Aqoxy2G03328 Aquilegia oxysepala HOM05D006587 ORTHO05D008487 5.6e-51 205.7 204 57.8
COL.COLO4_06205 Corchorus olitorius HOM05D006587 ORTHO05D008487 7.5e-48 195.3 233 50.6
AagrBONN_evm.TU.Sc2ySwM_340.504 Anthoceros agrestis HOM05D006587 ORTHO05D008487 9.2e-46 188.3 182 57.1
Glyma.10G250600 Glycine max HOM05D006587 ORTHO05D008487 9.2e-46 188.3 121 76.0
AUR62038173 Chenopodium quinoa HOM05D006587 ORTHO05D008487 5.2e-41 172.6 212 45.8
Cfa024389 Carpinus fangiana HOM05D006587 ORTHO05D008487 1.0e-36 158.3 301 38.2
Cre16.g670617 Chlamydomonas reinhardtii HOM05D006587 ORTHO05D008487 5.6e-35 152.5 253 38.3
Lalb_Chr02g0144661 Lupinus albus HOM05D006587 ORTHO05D008487 1.5e-27 127.9 115 59.1
Lalb_Chr02g0144651 Lupinus albus HOM05D006587 ORTHO05D008487 5.8e-16 89.4 64 64.1
Lsat_1_v5_gn_9_31900 Lactuca sativa HOM05D006587 ORTHO05D011576 5.4e-14 82.8 79 48.1
TAR362G0446 Trochodendron aralioides HOM05D006587 ORTHO05D008487 3.0e-12 77.0 46 84.8
PSO151G0052 Papaver somniferum HOM05D004736 ORTHO05D030424 3.9e-12 76.6 73 53.4
SEGI_15408 Sequoiadendron giganteum HOM05D006587 ORTHO05D008487 3.7e-10 70.1 45 66.7
Gorai.004G106600 Gossypium raimondii HOM05D006587 ORTHO05D008487 9.0e-09 65.5 53 60.4
Gorai.012G092500 Gossypium raimondii HOM05D006587 ORTHO05D008487 4.5e-08 63.2 47 68.1
SEGI_20820 Sequoiadendron giganteum HOM05D006587 ORTHO05D008487 5.8e-08 62.8 52 69.2


User provided reference genes

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