Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc138.13 Carica papaya HOM05D002707 ORTHO05D002925 6.7e-53 210.7 128 100.0
THA.LOC104818403 Tarenaya hassleriana HOM05D002707 ORTHO05D002925 1.3e-32 143.3 128 64.8
COL.COLO4_33121 Corchorus olitorius HOM05D002707 ORTHO05D002925 9.4e-31 137.1 123 59.3
BcaB08g37242 Brassica carinata HOM05D002707 ORTHO05D002925 1.2e-30 136.7 126 65.9
Gohir.A03G167200 Gossypium hirsutum HOM05D002707 ORTHO05D002925 2.1e-30 136.0 122 66.4
Gohir.D02G190300 Gossypium hirsutum HOM05D002707 ORTHO05D002925 2.1e-30 136.0 122 66.4
Gorai.005G213000 Gossypium raimondii HOM05D002707 ORTHO05D002925 2.1e-30 136.0 122 66.4
A03p04000 Brassica napus HOM05D002707 ORTHO05D002925 7.9e-30 134.0 129 65.1
BolC3t12978H Brassica oleracea HOM05D002707 ORTHO05D002925 1.0e-29 133.7 130 64.6
BcaB01g05653 Brassica carinata HOM05D002707 ORTHO05D002925 1.4e-29 133.3 130 64.6
C03p04470 Brassica napus HOM05D002707 ORTHO05D002925 1.4e-29 133.3 130 66.9
Duzib052G0594 Durio zibethinus HOM05D002707 ORTHO05D002925 2.3e-29 132.5 122 63.1
C09p68350 Brassica napus HOM05D002707 ORTHO05D002925 3.9e-29 131.7 126 54.0
BolC9t59582H Brassica oleracea HOM05D002707 ORTHO05D002925 3.9e-29 131.7 126 54.0
A10p28140 Brassica napus HOM05D002707 ORTHO05D002925 6.7e-29 131.0 127 52.8
Ciclev10031861m.g Citrus clementina HOM05D002707 ORTHO05D002925 6.7e-29 131.0 122 72.1
Potri.007G076300 Populus trichocarpa HOM05D002707 ORTHO05D002925 6.7e-29 131.0 122 51.6
BraA03t09743Z Brassica rapa HOM05D002707 ORTHO05D002925 8.8e-29 130.6 129 66.7
Thhalv10013753m.g Eutrema salsugineum HOM05D002707 ORTHO05D002925 1.5e-28 129.8 138 61.6
CARHR204380 Cardamine hirsuta HOM05D002707 ORTHO05D002925 2.6e-28 129.0 139 48.9
Sp6g34280 Schrenkiella parvula HOM05D002707 ORTHO05D002925 4.4e-28 128.3 137 63.5
AL6G19310 Arabidopsis lyrata HOM05D002707 ORTHO05D002925 1.3e-27 126.7 138 63.8
AT5G08580 Arabidopsis thaliana HOM05D002707 ORTHO05D002925 2.8e-27 125.6 138 63.8
CANSAT78G0823 Cannabis sativa HOM05D002707 ORTHO05D002925 2.8e-27 125.6 134 50.0
Duzib248G1528 Durio zibethinus HOM05D002707 ORTHO05D002925 2.8e-27 125.6 122 62.3
Eucgr.J00344 Eucalyptus grandis HOM05D002707 ORTHO05D002925 2.8e-27 125.6 130 53.8
PSO063G4385 Papaver somniferum HOM05D002707 ORTHO05D002925 2.8e-27 125.6 84 66.7
BcaB01g05580 Brassica carinata HOM05D002707 ORTHO05D002925 3.7e-27 125.2 125 68.8
Duzib132G0358 Durio zibethinus HOM05D002707 ORTHO05D002925 3.7e-27 125.2 122 63.1
PSO782G4858 Papaver somniferum HOM05D002707 ORTHO05D002925 3.7e-27 125.2 84 66.7
Manes.11G001200 Manihot esculenta HOM05D002707 ORTHO05D002925 1.1e-26 123.6 128 69.5
Carub.0006s0755 Capsella rubella HOM05D002707 ORTHO05D002925 1.4e-26 123.2 139 61.9
RcHm_v2.0_Chr4g0447021 Rosa chinensis HOM05D002707 ORTHO05D002925 4.1e-26 121.7 123 59.3
TAR629G2454 Trochodendron aralioides HOM05D002707 ORTHO05D002925 4.1e-26 121.7 122 53.3
Haze_17410 Corylus avellana HOM05D002707 ORTHO05D002925 9.1e-26 120.6 124 58.9
Haze_17421 Corylus avellana HOM05D002707 ORTHO05D002925 9.1e-26 120.6 124 58.9
MD13G1002500 Malus domestica HOM05D002707 ORTHO05D002925 2.0e-25 119.4 118 52.5
BraA10t44863Z Brassica rapa HOM05D002707 ORTHO05D002925 4.5e-25 118.2 124 50.8
Aa31LG3G17940 Aethionema arabicum HOM05D002707 ORTHO05D002925 1.7e-24 116.3 108 54.6
TWI53G0888 Tripterygium wilfordii HOM05D002707 ORTHO05D002925 3.8e-24 115.2 123 56.1
Glyma.10G287600 Glycine max HOM05D002707 ORTHO05D002925 6.5e-24 114.4 120 54.2
Sed0023629 Sechium edule HOM05D002707 ORTHO05D002925 1.1e-23 113.6 127 63.8
Sabra07G0064300 Salix brachista HOM05D002707 ORTHO05D002925 2.5e-23 112.5 122 47.5
TWI74G0128 Tripterygium wilfordii HOM05D002707 ORTHO05D002925 3.2e-23 112.1 122 50.0
Psat0s2189g0080 Pisum sativum HOM05D002707 ORTHO05D002925 7.2e-23 110.9 129 67.4
Aqoxy3G04309 Aquilegia oxysepala HOM05D002707 ORTHO05D002925 9.4e-23 110.5 94 58.5
Glyma.20G101700 Glycine max HOM05D002707 ORTHO05D002925 1.6e-22 109.8 120 48.3
Phvul.007G013600 Phaseolus vulgaris HOM05D002707 ORTHO05D002925 2.7e-22 109.0 120 46.7
SHI21188 Sapria himalayana HOM05D002707 ORTHO05D002925 6.1e-22 107.8 131 45.8
Cfa018658 Carpinus fangiana HOM05D002707 ORTHO05D002925 1.4e-21 106.7 99 64.6
Eucgr.J00346 Eucalyptus grandis HOM05D002707 ORTHO05D002925 5.2e-21 104.8 126 49.2
Gohir.D13G059600 Gossypium hirsutum HOM05D002707 ORTHO05D002925 5.2e-21 104.8 122 47.5
Gorai.013G067400 Gossypium raimondii HOM05D002707 ORTHO05D002925 5.2e-21 104.8 122 47.5
VMungo0720G1527 Vigna mungo HOM05D002707 ORTHO05D002925 8.8e-21 104.0 129 43.4
Gohir.A13G062300 Gossypium hirsutum HOM05D002707 ORTHO05D002925 1.1e-20 103.6 122 47.5
Thecc.02G154000 Theobroma cacao HOM05D002707 ORTHO05D002925 2.6e-20 102.4 122 48.4
Solyc02g150120.1 Solanum lycopersicum HOM05D002707 ORTHO05D002925 4.4e-20 101.7 123 48.0
Sopen02g008710 Solanum pennellii HOM05D002707 ORTHO05D002925 4.4e-20 101.7 123 48.8
TPR.G4110 Trifolium pratense HOM05D002707 ORTHO05D002925 5.7e-20 101.3 132 62.1
GSVIVG01034380001 Vitis vinifera HOM05D002707 ORTHO05D002925 2.2e-19 99.4 124 59.7
CDE05G1371 Ceratophyllum demersum HOM05D002707 ORTHO05D002925 2.8e-19 99.0 125 50.4
Medtr1g115135 Medicago truncatula HOM05D002707 ORTHO05D002925 2.8e-19 99.0 127 54.3
Nn3g18570 Nelumbo nucifera HOM05D002707 ORTHO05D002925 1.4e-18 96.7 132 44.7
DCAR_023484 Daucus carota HOM05D002707 ORTHO05D002925 3.1e-18 95.5 125 44.8
Ca_11269_v3 Cicer arietinum L. HOM05D002707 ORTHO05D002925 5.3e-18 94.7 126 51.6
Prupe.1G349900 Prunus persica HOM05D002707 ORTHO05D002925 7.0e-18 94.4 118 51.7
Nitab4.5_0000146g0100 Nicotiana tabacum HOM05D002707 ORTHO05D002925 9.1e-18 94.0 125 51.2
Atru.chr11.1263 Acer truncatum HOM05D002707 ORTHO05D002925 1.2e-17 93.6 120 57.5
Actinidia04358 Actinidia chinensis HOM05D002707 ORTHO05D002925 2.0e-17 92.8 130 42.3
CAN.G187.3 Capsicum annuum HOM05D002707 ORTHO05D002925 5.0e-16 88.2 123 43.9
Lalb_Chr10g0094771 Lupinus albus HOM05D002707 ORTHO05D002925 6.5e-16 87.8 125 39.2
RhsimUnG0102900 Rhododendron simsii HOM05D002707 ORTHO05D002925 8.5e-16 87.4 124 41.1
Nitab4.5_0003448g0050 Nicotiana tabacum HOM05D002707 ORTHO05D002925 1.5e-15 86.7 94 52.1
THA.LOC104819359 Tarenaya hassleriana HOM05D002707 ORTHO05D002925 1.5e-15 86.7 103 50.5
Sc21g0003790 Simmondsia chinensis HOM05D002707 ORTHO05D002925 4.2e-15 85.1 158 38.0
ATR0789G152 Amborella trichopoda HOM05D002707 ORTHO05D002925 4.7e-14 81.6 125 46.4
Potri.005G087600 Populus trichocarpa HOM05D002707 ORTHO05D002925 6.1e-14 81.3 72 54.2
HanXRQChr06g0171571 Helianthus annuus HOM05D002707 ORTHO05D002925 8.0e-14 80.9 127 48.0
EL10Ac9g22990 Beta vulgaris HOM05D002707 ORTHO05D002925 1.4e-13 80.1 153 35.3
Lj5g0021572 Lotus japonicus HOM05D002707 ORTHO05D002925 2.3e-13 79.3 127 54.3
MBI01_g20331_MAGBIO Magnolia biondii HOM05D002707 ORTHO05D002925 3.0e-13 79.0 97 48.5
MD00G1127000 Malus domestica HOM05D002707 ORTHO05D002925 3.0e-13 79.0 89 64.0
CiPaw.15G001600 Carya illinoinensis HOM05D002707 ORTHO05D002925 5.2e-13 78.2 73 50.7
Lsat_1_v5_gn_3_35260 Lactuca sativa HOM05D002707 ORTHO05D002925 5.2e-13 78.2 90 53.3
QL01p000822 Quercus lobata HOM05D002707 ORTHO05D002925 5.2e-13 78.2 125 37.6
Ah.01g012000 Amaranthus hybridus HOM05D002707 ORTHO05D002925 6.8e-13 77.8 104 42.3
AUR62017738 Chenopodium quinoa HOM05D002707 ORTHO05D002925 1.2e-12 77.0 107 42.1
AUR62032934 Chenopodium quinoa HOM05D002707 ORTHO05D002925 1.2e-12 77.0 107 40.2
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 3.4e-12 75.5 88 63.6
arahy.Tifrunner.gnm1.ann1.L3CNX8 Arachis hypogaea HOM05D002707 ORTHO05D002925 4.4e-12 75.1 130 43.8
MELO3C011760.2 Cucumis melo HOM05D002707 ORTHO05D002925 7.5e-12 74.3 93 45.2
Lsat_1_v5_gn_9_102941 Lactuca sativa HOM05D002707 ORTHO05D002925 1.3e-11 73.6 91 51.6
Dinv01364 Davidia involucrata HOM05D002707 ORTHO05D002925 2.2e-11 72.8 128 37.5
Hma1.2p1_0413F.1_g147390 Hydrangea macrophylla HOM05D002707 ORTHO05D002925 4.8e-11 71.6 72 63.9
FvH4_4g37230 Fragaria vesca HOM05D002707 ORTHO05D002925 1.1e-10 70.5 122 48.4
Sabra05G0072400 Salix brachista HOM05D002707 ORTHO05D002925 1.1e-10 70.5 72 48.6
HPP92_022906 Vanilla planifolia HOM05D002707 ORTHO05D002925 1.1e-10 70.5 126 42.9
Lj6A712T60 Lonicera japonica HOM05D002707 ORTHO05D002925 1.8e-10 69.7 70 51.4
Lj6P707G42 Lonicera japonica HOM05D002707 ORTHO05D002925 1.8e-10 69.7 70 51.4
Oeu006338.1 Olea europaea HOM05D002707 ORTHO05D002925 1.8e-10 69.7 79 44.3
SGA_v2.0_scaffold65G22200 Striga asiatica HOM05D002707 ORTHO05D002925 2.4e-10 69.3 124 37.1
MELO3C005073.2 Cucumis melo HOM05D002707 ORTHO05D002925 4.1e-10 68.6 74 47.3
Pp3c23_22490 Physcomitrium patens HOM05D002707 ORTHO05D002925 1.2e-09 67.0 76 46.1
Oeu027927.3 Olea europaea HOM05D002707 ORTHO05D002925 1.6e-09 66.6 90 65.6
PGSC0003DMG400003301 Solanum tuberosum HOM05D002707 ORTHO05D010217 2.0e-09 66.2 89 43.8
CsaV3_UNG101750 Cucumis sativus L. HOM05D002707 ORTHO05D002925 2.7e-09 65.9 74 45.9
CsaV3_UNG110810 Cucumis sativus L. HOM05D002707 ORTHO05D002925 2.7e-09 65.9 74 45.9
Lalb_Chr21g0307071 Lupinus albus HOM05D002707 ORTHO05D002925 2.7e-09 65.9 92 44.6
FAN07G2687 Fragaria x ananassa HOM05D002707 ORTHO05D002925 1.0e-08 63.9 120 42.5
ClCG01G008040 Citrullus lanatus HOM05D002707 ORTHO05D002925 1.3e-08 63.5 74 44.6
Peaxi162Scf00268g01424 Petunia axillaris HOM05D002707 ORTHO05D002925 1.3e-08 63.5 100 42.0
Migut.E00674 Erythranthe guttata HOM05D002707 ORTHO05D002925 1.9e-07 59.7 98 39.8
CsaV3_5G021810 Cucumis sativus L. HOM05D002707 ORTHO05D002925 2.5e-07 59.3 43 65.1
HanXRQChr04g0099281 Helianthus annuus HOM05D002707 ORTHO05D002925 9.4e-07 57.4 128 32.8
arahy.Tifrunner.gnm1.ann1.RRWC6P Arachis hypogaea HOM05D002707 ORTHO05D002925 1.6e-06 56.6 46 60.9
MSTRG.13672 Avicennia marina HOM05D002707 ORTHO05D002925 3.6e-06 55.5 131 32.8
CsaV3_5G029090 Cucumis sativus L. HOM05D002707 ORTHO05D002925 3.6e-06 55.5 93 36.6
ClCG02G014220 Citrullus lanatus HOM05D002707 ORTHO05D002925 6.1e-06 54.7 93 34.4


User provided reference genes

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