Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc132.5 Carica papaya HOM05D002380 ORTHO05D008286 9.9e-239 829.7 417 100.0
CiPaw.04G112000 Carya illinoinensis HOM05D002380 ORTHO05D008286 2.5e-165 585.9 381 76.9
Duzib138G0368 Durio zibethinus HOM05D002380 ORTHO05D008286 5.5e-165 584.7 386 75.6
Ciclev10014719m.g Citrus clementina HOM05D002380 ORTHO05D008286 2.1e-164 582.8 383 77.3
GSVIVG01030484001 Vitis vinifera HOM05D002380 ORTHO05D008286 2.1e-164 582.8 383 75.7
QL08p031162 Quercus lobata HOM05D002380 ORTHO05D008286 4.0e-163 578.6 382 75.4
Cfa014331 Carpinus fangiana HOM05D002380 ORTHO05D008286 5.2e-163 578.2 382 74.3
Gohir.D07G193100 Gossypium hirsutum HOM05D002380 ORTHO05D008286 8.8e-163 577.4 384 75.3
Gorai.001G216200 Gossypium raimondii HOM05D002380 ORTHO05D008286 8.8e-163 577.4 384 75.3
Manes.12G071600 Manihot esculenta HOM05D002380 ORTHO05D008286 1.2e-162 577.0 387 73.9
Potri.014G156800 Populus trichocarpa HOM05D002380 ORTHO05D008286 3.4e-162 575.5 383 73.4
Atru.chr6.3236 Acer truncatum HOM05D002380 ORTHO05D008286 9.8e-162 573.9 385 74.8
FvH4_6g42610 Fragaria vesca HOM05D002380 ORTHO05D008286 6.3e-161 571.2 382 73.3
Haze_12786 Corylus avellana HOM05D002380 ORTHO05D008286 1.1e-160 570.5 385 73.5
FAN05G1087 Fragaria x ananassa HOM05D002380 ORTHO05D008286 2.4e-160 569.3 382 73.0
TAR626G1235 Trochodendron aralioides HOM05D002380 ORTHO05D008286 5.4e-160 568.2 383 73.9
Gohir.A07G186600 Gossypium hirsutum HOM05D002380 ORTHO05D008286 1.2e-159 567.0 384 74.2
FAN14G4830 Fragaria x ananassa HOM05D002380 ORTHO05D008286 1.0e-158 563.9 391 71.6
Nn1g03403 Nelumbo nucifera HOM05D002380 ORTHO05D008286 1.0e-158 563.9 383 73.4
MD09G1112100 Malus domestica HOM05D002380 ORTHO05D008286 1.3e-158 563.5 381 73.0
RcHm_v2.0_Chr2g0158461 Rosa chinensis HOM05D002380 ORTHO05D008286 2.9e-158 562.4 383 72.8
CSS0029680 Camellia sinensis var. sinensis HOM05D002380 ORTHO05D008286 1.1e-157 560.5 369 75.6
TWI18G0959 Tripterygium wilfordii HOM05D002380 ORTHO05D008286 4.3e-157 558.5 379 73.4
Psat0s2606g0080 Pisum sativum HOM05D002380 ORTHO05D008286 6.1e-156 554.7 379 71.8
COL.COLO4_21855 Corchorus olitorius HOM05D002380 ORTHO05D008286 8.0e-156 554.3 336 81.0
Dinv08737 Davidia involucrata HOM05D002380 ORTHO05D008286 1.8e-155 553.1 385 71.7
Medtr8g465870 Medicago truncatula HOM05D002380 ORTHO05D008286 5.2e-155 551.6 380 71.3
ClCG02G002150 Citrullus lanatus HOM05D002380 ORTHO05D008286 8.9e-155 550.8 348 76.1
vmacro12176 Vaccinium macrocarpon HOM05D002380 ORTHO05D008286 8.9e-155 550.8 401 69.6
Aa31LG5G4710 Aethionema arabicum HOM05D002380 ORTHO05D008286 2.0e-154 549.7 380 71.1
arahy.Tifrunner.gnm1.ann1.C2B2I7 Arachis hypogaea HOM05D002380 ORTHO05D008286 4.4e-154 548.5 386 71.2
Glyma.14G046600 Glycine max HOM05D002380 ORTHO05D008286 4.4e-154 548.5 381 71.7
Cc05_g03220 Coffea canephora HOM05D002380 ORTHO05D008286 7.5e-154 547.7 373 72.9
Thecc.01G180100 Theobroma cacao HOM05D002380 ORTHO05D008286 1.7e-153 546.6 381 72.2
Sabra14G0118600 Salix brachista HOM05D002380 ORTHO05D008286 2.2e-153 546.2 462 62.1
Actinidia13740 Actinidia chinensis HOM05D002380 ORTHO05D008286 2.9e-153 545.8 388 70.4
LjContig00564g0001978 Lotus japonicus HOM05D002380 ORTHO05D008286 2.9e-153 545.8 382 70.7
CsaV3_7G003340 Cucumis sativus L. HOM05D002380 ORTHO05D008286 1.4e-152 543.5 387 69.5
Lj1A778T40 Lonicera japonica HOM05D002380 ORTHO05D008286 1.4e-152 543.5 399 69.4
VMungo0647G2578 Vigna mungo HOM05D002380 ORTHO05D008286 1.4e-152 543.5 380 70.5
arahy.Tifrunner.gnm1.ann1.Y9X1U6 Arachis hypogaea HOM05D002380 ORTHO05D008286 2.4e-152 542.7 386 70.2
CANSAT64G0203 Cannabis sativa HOM05D002380 ORTHO05D008286 2.4e-152 542.7 384 70.1
Hma1.2p1_0445F.1_g154520 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 2.4e-152 542.7 352 75.9
LjContig00564g0004339 Lotus japonicus HOM05D002380 ORTHO05D008286 2.4e-152 542.7 382 70.2
Sed0027871 Sechium edule HOM05D002380 ORTHO05D008286 2.4e-152 542.7 358 73.7
Sp4g14960 Schrenkiella parvula HOM05D002380 ORTHO05D008286 3.2e-152 542.3 382 69.1
Thhalv10016422m.g Eutrema salsugineum HOM05D002380 ORTHO05D008286 5.4e-152 541.6 382 69.9
Eucgr.A01100 Eucalyptus grandis HOM05D002380 ORTHO05D008286 9.2e-152 540.8 374 70.9
PSO541G2284 Papaver somniferum HOM05D002380 ORTHO05D008286 1.2e-151 540.4 348 76.1
Prupe.3G212600 Prunus persica HOM05D002380 ORTHO05D008286 1.2e-151 540.4 335 78.8
DCAR_019750 Daucus carota HOM05D002380 ORTHO05D008286 2.0e-151 539.7 389 70.7
BcaC01g05900 Brassica carinata HOM05D002380 ORTHO05D008286 5.9e-151 538.1 382 68.6
BolC3t14508H Brassica oleracea HOM05D002380 ORTHO05D008286 5.9e-151 538.1 382 69.1
PSO675G4452 Papaver somniferum HOM05D002380 ORTHO05D008286 5.9e-151 538.1 384 70.3
Carub.0004s1397 Capsella rubella HOM05D002380 ORTHO05D008286 1.3e-150 537.0 382 69.1
CARHR126480 Cardamine hirsuta HOM05D002380 ORTHO05D008286 1.7e-150 536.6 383 68.7
C03p21270 Brassica napus HOM05D002380 ORTHO05D008286 2.3e-150 536.2 382 68.3
A03p18220 Brassica napus HOM05D002380 ORTHO05D008286 3.9e-150 535.4 382 68.6
BraA03t11082Z Brassica rapa HOM05D002380 ORTHO05D008286 6.6e-150 534.6 382 68.3
AT2G32640 Arabidopsis thaliana HOM05D002380 ORTHO05D008286 8.6e-150 534.3 382 69.6
HanXRQChr10g0306601 Helianthus annuus HOM05D002380 ORTHO05D008286 1.1e-149 533.9 387 69.3
ECA234G2702 Erigeron canadensis HOM05D002380 ORTHO05D008286 1.5e-149 533.5 389 68.9
THA.LOC104826140 Tarenaya hassleriana HOM05D002380 ORTHO05D008286 1.5e-149 533.5 383 69.2
CAN.G855.60 Capsicum annuum HOM05D002380 ORTHO05D008286 5.6e-149 531.6 386 69.4
BcaB01g03970 Brassica carinata HOM05D002380 ORTHO05D008286 2.8e-148 529.3 383 67.9
Phvul.008G211500 Phaseolus vulgaris HOM05D002380 ORTHO05D008286 2.8e-148 529.3 382 69.4
Nitab4.5_0005164g0050 Nicotiana tabacum HOM05D002380 ORTHO05D006960 1.8e-147 526.6 383 68.7
Nitab4.5_0003247g0030 Nicotiana tabacum HOM05D002380 ORTHO05D006960 5.2e-147 525.0 383 68.4
Migut.H01235 Erythranthe guttata HOM05D002380 ORTHO05D008286 6.8e-147 524.6 345 74.8
Sopen01g045360 Solanum pennellii HOM05D002380 ORTHO05D008286 1.2e-146 523.9 385 68.6
SalBow1G4831 Salvia bowleyana HOM05D002380 ORTHO05D008286 7.5e-146 521.2 360 70.0
PGR042G3960 Punica granatum HOM05D002380 ORTHO05D008286 2.9e-145 519.2 385 68.1
Solyc01g102950.3 Solanum lycopersicum HOM05D002380 ORTHO05D008286 3.7e-145 518.8 385 68.1
Hma1.2p1_0445F.1_g154530 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 6.4e-145 518.1 336 76.2
SalBow1G6561 Salvia bowleyana HOM05D002380 ORTHO05D008286 8.3e-145 517.7 360 70.0
Ca_06119_v3 Cicer arietinum L. HOM05D002380 ORTHO05D008286 4.1e-144 515.4 359 70.8
Rhsim06G0166100 Rhododendron simsii HOM05D002380 ORTHO05D008286 2.0e-143 513.1 350 72.9
AUR62037919 Chenopodium quinoa HOM05D002380 ORTHO05D008286 4.6e-143 511.9 345 69.9
AL4G28040 Arabidopsis lyrata HOM05D002380 ORTHO05D008286 6.0e-143 511.5 335 74.0
Sc21g0001190 Simmondsia chinensis HOM05D002380 ORTHO05D008286 1.3e-142 510.4 346 72.0
AUR62040170 Chenopodium quinoa HOM05D002380 ORTHO05D008286 1.7e-142 510.0 345 70.4
EL10Ac7g16733 Beta vulgaris HOM05D002380 ORTHO05D008286 6.6e-142 508.1 350 70.0
Peaxi162Scf00011g02118 Petunia axillaris HOM05D002380 ORTHO05D008286 4.7e-140 501.9 400 64.5
CDE04G2212 Ceratophyllum demersum HOM05D002380 ORTHO05D008286 2.3e-139 499.6 382 65.4
MELO3C018839.2 Cucumis melo HOM05D002380 ORTHO05D008286 1.2e-138 497.3 333 72.7
Lalb_Chr04g0249901 Lupinus albus HOM05D002380 ORTHO05D008286 1.0e-134 484.2 297 77.4
Os08g0422000 Oryza sativa ssp. japonica HOM05D002380 ORTHO05D008286 2.6e-130 469.5 340 66.2
Lsat_1_v5_gn_5_123621 Lactuca sativa HOM05D002380 ORTHO05D008286 2.2e-129 466.5 372 64.5
TPR.G26188 Trifolium pratense HOM05D002380 ORTHO05D008286 3.0e-126 456.1 335 68.1
ATR0059G008 Amborella trichopoda HOM05D002380 ORTHO05D008286 2.5e-125 453.0 348 63.8
AUR62044039 Chenopodium quinoa HOM05D002380 ORTHO05D008286 1.2e-119 434.1 345 61.4
HPP92_026432 Vanilla planifolia HOM05D002380 ORTHO05D008286 5.3e-115 418.7 270 72.2
Ah.15g091260 Amaranthus hybridus HOM05D002380 ORTHO05D008286 7.6e-114 414.8 345 61.7
Pp3c11_22720 Physcomitrium patens HOM05D002380 ORTHO05D008286 1.4e-112 410.6 344 57.8
FAN02G0433 Fragaria x ananassa HOM05D002380 ORTHO05D008286 6.0e-111 405.2 373 60.1
AagrBONN_evm.TU.Sc2ySwM_368.2332 Anthoceros agrestis HOM05D002380 ORTHO05D008286 1.1e-109 401.0 359 55.4
Mapoly0041s0126 Marchantia polymorpha HOM05D002380 ORTHO05D008286 2.1e-108 396.7 371 53.6
SMO111G0098 Selaginella moellendorffii HOM05D002380 ORTHO05D008286 7.6e-106 388.3 367 52.3
MBI19_g44049_MAGBIO Magnolia biondii HOM05D002380 ORTHO05D008286 8.2e-92 341.7 233 74.7
unitig_62.g23230 Utricularia gibba HOM05D002380 ORTHO05D008286 1.0e-89 334.7 245 67.8
SGA_v2.0_scaffold159G37563 Striga asiatica HOM05D002380 ORTHO05D001198 1.4e-88 330.9 321 55.5
Zm00001eb179140 Zea mays HOM05D002380 ORTHO05D008286 5.3e-83 312.4 333 50.2
Cre06.g264250 Chlamydomonas reinhardtii HOM05D002380 ORTHO05D008286 3.0e-78 296.6 357 42.9
Aqoxy1G02993 Aquilegia oxysepala HOM05D002380 ORTHO05D008286 5.7e-77 292.4 211 68.7
Cre04.g221550 Chlamydomonas reinhardtii HOM05D002380 ORTHO05D008286 9.4e-64 248.4 301 43.2
Hma1.2p1_0895F.1_g233700 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 1.2e-47 194.9 115 78.3
Hund20419 Selenicereus undatus HOM05D002380 ORTHO05D008286 8.3e-44 182.2 115 69.6
SEGI_17941 Sequoiadendron giganteum HOM05D002380 ORTHO05D008286 3.1e-43 180.3 164 58.5
PGSC0003DMG400020719 Solanum tuberosum HOM05D002380 ORTHO05D008286 9.2e-43 178.7 105 75.2
MBI19_g42463_MAGBIO Magnolia biondii HOM05D002380 ORTHO05D008286 8.9e-38 162.2 159 55.3
Aqoxy1G02984 Aquilegia oxysepala HOM05D002380 ORTHO05D008286 5.8e-37 159.5 100 73.0
Hund20420 Selenicereus undatus HOM05D002380 ORTHO05D010615 6.8e-30 136.0 85 69.4
CBR_g8452 Chara braunii HOM05D002380 ORTHO05D008286 8.6e-25 119.0 108 50.9
Gohir.A07G186850 Gossypium hirsutum HOM05D002380 ORTHO05D026288 2.7e-18 97.4 75 68.0
CBR_g8454 Chara braunii HOM05D002380 ORTHO05D008286 2.0e-13 81.3 88 40.9
Actinidia09729 Actinidia chinensis HOM05D002380 ORTHO05D026288 5.4e-11 73.2 76 50.0
Lalb_Chr04g0249911 Lupinus albus HOM05D002380 ORTHO05D026288 2.3e-09 67.8 60 56.7
Lj1P772T14 Lonicera japonica HOM05D002380 ORTHO05D008286 5.1e-09 66.6 67 56.7
CAN.G96.10 Capsicum annuum HOM05D002380 ORTHO05D026288 3.1e-06 57.4 46 54.3
CBR_g8455 Chara braunii HOM05D002380 ORTHO05D008286 9.0e-06 55.8 61 49.2


User provided reference genes

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