Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc131.92 Carica papaya HOM05D006362 ORTHO05D008295 4.7e-61 237.7 118 100.0
CsaV3_1G044730 Cucumis sativus L. HOM05D006362 ORTHO05D008295 4.6e-48 194.5 116 80.2
ClCG05G014560 Citrullus lanatus HOM05D006362 ORTHO05D008295 2.5e-46 188.7 116 77.6
MELO3C018085.2 Cucumis melo HOM05D006362 ORTHO05D008295 2.5e-46 188.7 116 77.6
FAN12G0341 Fragaria x ananassa HOM05D006362 ORTHO05D008295 2.5e-46 188.7 117 81.2
FAN22G0212 Fragaria x ananassa HOM05D006362 ORTHO05D008295 2.5e-46 188.7 117 81.2
CiPaw.11G185900 Carya illinoinensis HOM05D006362 ORTHO05D008295 3.3e-46 188.3 116 81.0
FAN17G1244 Fragaria x ananassa HOM05D006362 ORTHO05D008295 3.3e-46 188.3 117 81.2
Sed0025840 Sechium edule HOM05D006362 ORTHO05D008295 7.3e-46 187.2 116 75.9
FvH4_4g07170 Fragaria vesca HOM05D006362 ORTHO05D008295 1.2e-45 186.4 117 80.3
PGR031G2573 Punica granatum HOM05D006362 ORTHO05D008295 1.2e-45 186.4 116 80.2
Prupe.4G206200 Prunus persica HOM05D006362 ORTHO05D008295 6.2e-45 184.1 116 79.3
Ca_18860_v3 Cicer arietinum L. HOM05D006362 ORTHO05D008295 8.1e-45 183.7 116 77.6
Haze_09637 Corylus avellana HOM05D006362 ORTHO05D008295 1.4e-44 183.0 116 76.7
RcHm_v2.0_Chr4g0399351 Rosa chinensis HOM05D006362 ORTHO05D008295 1.8e-44 182.6 117 79.5
Cfa020397 Carpinus fangiana HOM05D006362 ORTHO05D008295 3.1e-44 181.8 116 75.9
TPR.G25875 Trifolium pratense HOM05D006362 ORTHO05D008295 4.0e-44 181.4 116 75.9
Lj3g0015245 Lotus japonicus HOM05D006362 ORTHO05D008295 5.2e-44 181.0 112 80.4
QL08p012554 Quercus lobata HOM05D006362 ORTHO05D008295 5.2e-44 181.0 114 78.1
Psat7g162880 Pisum sativum HOM05D006362 ORTHO05D008295 6.8e-44 180.6 116 76.7
TAR626G1624 Trochodendron aralioides HOM05D006362 ORTHO05D008295 6.8e-44 180.6 116 77.6
Sc14g0006480 Simmondsia chinensis HOM05D006362 ORTHO05D008295 8.9e-44 180.3 116 79.3
CANSAT11G0353 Cannabis sativa HOM05D006362 ORTHO05D008295 1.2e-43 179.9 116 77.6
arahy.Tifrunner.gnm1.ann1.GJJ2CM Arachis hypogaea HOM05D006362 ORTHO05D008295 2.6e-43 178.7 112 76.8
arahy.Tifrunner.gnm1.ann1.Z96I2W Arachis hypogaea HOM05D006362 ORTHO05D008295 2.6e-43 178.7 112 76.8
Lalb_Chr03g0030071 Lupinus albus HOM05D006362 ORTHO05D008295 2.6e-43 178.7 116 74.1
Ciclev10007871m.g Citrus clementina HOM05D006362 ORTHO05D008295 5.8e-43 177.6 116 75.9
Oeu021406.2 Olea europaea HOM05D006362 ORTHO05D008295 7.5e-43 177.2 118 72.9
Atru.chr2.3247 Acer truncatum HOM05D006362 ORTHO05D008295 1.7e-42 176.0 116 75.0
Carub.0003s1481 Capsella rubella HOM05D006362 ORTHO05D008295 1.7e-42 176.0 116 75.0
Sp3g13370 Schrenkiella parvula HOM05D006362 ORTHO05D008295 1.7e-42 176.0 116 74.1
MD03G1209000 Malus domestica HOM05D006362 ORTHO05D008295 2.9e-42 175.3 110 80.0
Rhsim06G0213400 Rhododendron simsii HOM05D006362 ORTHO05D008295 2.9e-42 175.3 116 74.1
AT3G15160 Arabidopsis thaliana HOM05D006362 ORTHO05D008295 4.9e-42 174.5 116 73.3
Medtr4g081050 Medicago truncatula HOM05D006362 ORTHO05D008295 4.9e-42 174.5 116 74.1
Dinv40729 Davidia involucrata HOM05D006362 ORTHO05D008295 6.4e-42 174.1 116 73.3
A03p39180 Brassica napus HOM05D006362 ORTHO05D008295 1.1e-41 173.3 116 73.3
BcaC01g03890 Brassica carinata HOM05D006362 ORTHO05D008295 1.4e-41 172.9 116 73.3
C03p47540 Brassica napus HOM05D006362 ORTHO05D008295 1.4e-41 172.9 116 73.3
Manes.15G074800 Manihot esculenta HOM05D006362 ORTHO05D008295 1.4e-41 172.9 117 76.1
AL3G27550 Arabidopsis lyrata HOM05D006362 ORTHO05D008295 2.4e-41 172.2 116 72.4
vmacro11753 Vaccinium macrocarpon HOM05D006362 ORTHO05D008295 4.1e-41 171.4 116 70.7
GSVIVG01001989001 Vitis vinifera HOM05D006362 ORTHO05D008295 4.1e-41 171.4 116 71.6
BolC3t17019H Brassica oleracea HOM05D006362 ORTHO05D008295 5.4e-41 171.0 116 71.6
BolC3t17030H Brassica oleracea HOM05D006362 ORTHO05D008295 5.4e-41 171.0 116 71.6
Eucgr.F03442 Eucalyptus grandis HOM05D006362 ORTHO05D008295 7.1e-41 170.6 116 72.4
BraA03t13067Z Brassica rapa HOM05D006362 ORTHO05D008295 9.2e-41 170.2 116 71.6
PSO832G4364 Papaver somniferum HOM05D006362 ORTHO05D008295 9.2e-41 170.2 114 71.9
Potri.011G135800 Populus trichocarpa HOM05D006362 ORTHO05D008295 9.2e-41 170.2 114 72.8
Aa31LG8G2360 Aethionema arabicum HOM05D006362 ORTHO05D008295 1.2e-40 169.9 116 71.6
Thhalv10020417m.g Eutrema salsugineum HOM05D006362 ORTHO05D008295 1.6e-40 169.5 116 72.4
CSS0013960 Camellia sinensis var. sinensis HOM05D006362 ORTHO05D008295 2.1e-40 169.1 116 73.3
Migut.M01793 Erythranthe guttata HOM05D006362 ORTHO05D008295 2.1e-40 169.1 116 70.7
Phvul.011G136800 Phaseolus vulgaris HOM05D006362 ORTHO05D008295 2.1e-40 169.1 116 72.4
Thecc.07G046200 Theobroma cacao HOM05D006362 ORTHO05D008295 3.5e-40 168.3 118 70.3
Nn1g07069 Nelumbo nucifera HOM05D006362 ORTHO05D008295 7.8e-40 167.2 114 70.2
Duzib268G0905 Durio zibethinus HOM05D006362 ORTHO05D008295 1.0e-39 166.8 118 69.5
TWI38G1299 Tripterygium wilfordii HOM05D006362 ORTHO05D008295 1.3e-39 166.4 112 75.0
Nitab4.5_0002229g0190 Nicotiana tabacum HOM05D006362 ORTHO05D008295 1.7e-39 166.0 118 71.2
THA.LOC104818092 Tarenaya hassleriana HOM05D006362 ORTHO05D008295 1.7e-39 166.0 120 70.0
Gohir.A01G076501 Gossypium hirsutum HOM05D006362 ORTHO05D008295 2.3e-39 165.6 118 69.5
Hma1.2p1_1344F.1_g277040 Hydrangea macrophylla HOM05D006362 ORTHO05D008295 2.3e-39 165.6 107 76.6
EL10Ac4g07932 Beta vulgaris HOM05D006362 ORTHO05D008295 3.0e-39 165.2 116 71.6
Gohir.D01G064000 Gossypium hirsutum HOM05D006362 ORTHO05D008295 3.9e-39 164.9 118 69.5
Gorai.002G084800 Gossypium raimondii HOM05D006362 ORTHO05D008295 3.9e-39 164.9 118 69.5
CARHR090140 Cardamine hirsuta HOM05D006362 ORTHO05D008295 6.6e-39 164.1 116 71.6
Nitab4.5_0002342g0020 Nicotiana tabacum HOM05D006362 ORTHO05D008295 8.6e-39 163.7 118 70.3
AUR62020525 Chenopodium quinoa HOM05D006362 ORTHO05D008295 1.9e-38 162.5 116 72.4
Glyma.06G271800 Glycine max HOM05D006362 ORTHO05D008295 1.9e-38 162.5 116 70.7
Aqoxy1G03661 Aquilegia oxysepala HOM05D006362 ORTHO05D008295 1.6e-37 159.5 112 74.1
Gorai.009G425700 Gossypium raimondii HOM05D006362 ORTHO05D008295 1.6e-37 159.5 118 68.6
ATR0697G203 Amborella trichopoda HOM05D006362 ORTHO05D008295 2.8e-37 158.7 110 72.7
Cc05_g13400 Coffea canephora HOM05D006362 ORTHO05D008295 4.7e-37 157.9 112 71.4
DCAR_022536 Daucus carota HOM05D006362 ORTHO05D008295 4.7e-37 157.9 116 67.2
Gohir.A04G020300 Gossypium hirsutum HOM05D006362 ORTHO05D008295 4.7e-37 157.9 118 67.8
HanXRQChr13g0407741 Helianthus annuus HOM05D006362 ORTHO05D008295 4.7e-37 157.9 110 69.1
HPP92_009387 Vanilla planifolia HOM05D006362 ORTHO05D008295 6.2e-37 157.5 114 66.7
Gohir.D05G366200 Gossypium hirsutum HOM05D006362 ORTHO05D008295 8.1e-37 157.1 118 67.8
Solyc10g006410.3 Solanum lycopersicum HOM05D006362 ORTHO05D008295 1.1e-36 156.8 111 67.6
Ah.06g182950 Amaranthus hybridus HOM05D006362 ORTHO05D008295 1.4e-36 156.4 116 69.0
Sopen10g002360 Solanum pennellii HOM05D006362 ORTHO05D008295 2.3e-36 155.6 111 66.7
PGSC0003DMG402014396 Solanum tuberosum HOM05D006362 ORTHO05D008295 2.3e-36 155.6 111 66.7
ECA240G1610 Erigeron canadensis HOM05D006362 ORTHO05D008295 3.1e-36 155.2 116 64.7
Peaxi162Scf00387g00613 Petunia axillaris HOM05D006362 ORTHO05D008295 6.4e-34 147.5 111 65.8
VMungo0251G2436 Vigna mungo HOM05D006362 ORTHO05D008295 6.4e-34 147.5 116 65.5
CDE05G0917 Ceratophyllum demersum HOM05D006362 ORTHO05D008295 1.4e-33 146.4 119 63.0
SGA_v2.0_scaffold80G25930 Striga asiatica HOM05D006362 ORTHO05D008295 3.2e-33 145.2 118 62.7
CAN.G1781.12 Capsicum annuum HOM05D006362 ORTHO05D008295 3.5e-32 141.7 109 65.1
Lj1C868T5 Lonicera japonica HOM05D006362 ORTHO05D008295 1.6e-29 132.9 84 79.8
SHI31860 Sapria himalayana HOM05D006362 ORTHO05D008295 3.1e-28 128.6 116 56.9
Os04g0626900 Oryza sativa ssp. japonica HOM05D006362 ORTHO05D008295 2.0e-27 125.9 118 53.4
Mapoly0021s0009 Marchantia polymorpha HOM05D006362 ORTHO05D008295 2.9e-26 122.1 113 56.6
Pp3c23_6050 Physcomitrium patens HOM05D006362 ORTHO05D008295 4.9e-26 121.3 115 53.9
Pp3c24_12510 Physcomitrium patens HOM05D006362 ORTHO05D008295 6.4e-26 120.9 113 55.8
Rhsim12G0205700 Rhododendron simsii HOM05D006362 ORTHO05D008295 5.4e-25 117.9 91 68.1
COL.COLO4_09973 Corchorus olitorius HOM05D004186 ORTHO05D006965 9.3e-25 117.1 96 64.6
SMO115G0345 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 6.0e-24 114.4 111 56.8
Lsat_1_v5_gn_5_81640 Lactuca sativa HOM05D006362 ORTHO05D008295 7.8e-24 114.0 86 65.1
AUR62015672 Chenopodium quinoa HOM05D006362 ORTHO05D008295 1.3e-23 113.2 90 66.7
Sabra11G0122000 Salix brachista HOM05D006362 ORTHO05D008295 1.3e-18 96.7 117 47.9
HanXRQChr16g0507081 Helianthus annuus HOM05D006362 ORTHO05D008295 1.4e-17 93.2 83 60.2
AagrBONN_evm.TU.Sc2ySwM_117.2426 Anthoceros agrestis HOM05D006362 ORTHO05D008295 3.2e-17 92.0 106 49.1
Zm00001eb070060 Zea mays HOM05D006362 ORTHO05D008295 3.3e-14 82.0 79 51.9
CBR_g57501 Chara braunii HOM05D006362 ORTHO05D008295 2.6e-11 72.4 90 46.7
Hund23291 Selenicereus undatus HOM05D006362 ORTHO05D008295 1.2e-08 63.5 31 90.3
RcHm_v2.0_Chr4g0399371 Rosa chinensis HOM05D006362 ORTHO05D341637 7.4e-06 54.3 45 62.2


User provided reference genes

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