Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc125.51 Carica papaya HOM05D002214 ORTHO05D007367 7.8e-163 577.0 283 100.0
TWI09G0406 Tripterygium wilfordii HOM05D002214 ORTHO05D007367 6.0e-70 268.5 243 59.7
CiPaw.14G003400 Carya illinoinensis HOM05D002214 ORTHO05D007367 1.2e-67 260.8 245 55.9
Cfa010812 Carpinus fangiana HOM05D002214 ORTHO05D007367 2.6e-65 253.1 261 54.0
THA.LOC104817574 Tarenaya hassleriana HOM05D002214 ORTHO05D007367 2.6e-65 253.1 245 55.5
CARHR161660 Cardamine hirsuta HOM05D002214 ORTHO05D007367 1.9e-63 246.9 246 52.4
Ciclev10031605m.g Citrus clementina HOM05D002214 ORTHO05D007367 2.4e-63 246.5 248 53.2
Thecc.01G406200 Theobroma cacao HOM05D002214 ORTHO05D007367 2.4e-63 246.5 248 53.6
AT3G52030 Arabidopsis thaliana HOM05D002214 ORTHO05D007367 4.1e-63 245.7 242 53.7
Thhalv10010397m.g Eutrema salsugineum HOM05D002214 ORTHO05D007367 7.1e-63 245.0 245 52.2
Gorai.004G170100 Gossypium raimondii HOM05D002214 ORTHO05D007367 9.2e-63 244.6 243 51.4
Gohir.A08G142300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 1.2e-62 244.2 243 51.9
Carub.0005s1835 Capsella rubella HOM05D002214 ORTHO05D007367 4.6e-62 242.3 247 51.8
GSVIVG01032215001 Vitis vinifera HOM05D002214 ORTHO05D007367 1.0e-61 241.1 242 55.0
BcaC06g33020 Brassica carinata HOM05D002214 ORTHO05D007367 1.3e-61 240.7 245 51.4
Duzib138G1340 Durio zibethinus HOM05D002214 ORTHO05D007367 2.3e-61 240.0 222 55.4
Manes.07G010800 Manihot esculenta HOM05D002214 ORTHO05D007367 2.3e-61 240.0 238 53.8
C07p46730 Brassica napus HOM05D002214 ORTHO05D007367 3.0e-61 239.6 245 51.8
Sc11g0009040 Simmondsia chinensis HOM05D002214 ORTHO05D007367 3.0e-61 239.6 241 50.6
A03p48610 Brassica napus HOM05D002214 ORTHO05D007367 5.1e-61 238.8 245 52.2
AL5G32570 Arabidopsis lyrata HOM05D002214 ORTHO05D007367 1.1e-60 237.7 257 50.2
Rhsim07G0058900 Rhododendron simsii HOM05D002214 ORTHO05D007367 1.1e-60 237.7 243 51.9
Potri.009G056500 Populus trichocarpa HOM05D002214 ORTHO05D007367 2.5e-60 236.5 236 53.8
Actinidia19424 Actinidia chinensis HOM05D002214 ORTHO05D007367 4.3e-60 235.7 249 51.8
BraA03t13966Z Brassica rapa HOM05D002214 ORTHO05D007367 5.6e-60 235.3 253 50.2
Sp5g10260 Schrenkiella parvula HOM05D002214 ORTHO05D007367 5.6e-60 235.3 248 50.4
BcaC06g33377 Brassica carinata HOM05D002214 ORTHO05D007367 7.3e-60 235.0 245 51.0
RcHm_v2.0_Chr1g0318361 Rosa chinensis HOM05D002214 ORTHO05D007367 9.5e-60 234.6 232 51.7
BolC7t45191H Brassica oleracea HOM05D002214 ORTHO05D007367 1.2e-59 234.2 252 50.0
Hma1.2p1_0685F.1_g203260 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 1.8e-58 230.3 228 52.2
FAN10G2270 Fragaria x ananassa HOM05D002214 ORTHO05D007367 4.0e-58 229.2 235 50.2
Eucgr.G03320 Eucalyptus grandis HOM05D002214 ORTHO05D007367 2.6e-57 226.5 228 51.8
Eucgr.G03301 Eucalyptus grandis HOM05D002214 ORTHO05D007367 3.4e-57 226.1 228 51.3
FAN03G2729 Fragaria x ananassa HOM05D002214 ORTHO05D007367 3.4e-57 226.1 235 49.8
Prupe.2G024000 Prunus persica HOM05D002214 ORTHO05D007367 7.6e-57 224.9 246 51.2
CSS0000146 Camellia sinensis var. sinensis HOM05D002214 ORTHO05D007367 1.3e-56 224.2 246 48.4
CsaV3_7G030710 Cucumis sativus L. HOM05D002214 ORTHO05D007367 1.3e-56 224.2 257 45.9
Sed0008197 Sechium edule HOM05D002214 ORTHO05D007367 1.3e-56 224.2 268 46.6
vmacro13697 Vaccinium macrocarpon HOM05D002214 ORTHO05D007367 1.3e-56 224.2 297 44.4
CANSAT80G0536 Cannabis sativa HOM05D002214 ORTHO05D007367 2.4e-55 219.9 223 52.5
Lalb_Chr25g0282551 Lupinus albus HOM05D002214 ORTHO05D007367 4.1e-55 219.2 237 49.8
MD07G1023200 Malus domestica HOM05D002214 ORTHO05D007367 7.1e-55 218.4 246 48.4
Aqoxy2G00221 Aquilegia oxysepala HOM05D002214 ORTHO05D007367 1.2e-54 217.6 226 51.8
Medtr3g034210 Medicago truncatula HOM05D002214 ORTHO05D007367 1.2e-54 217.6 225 48.9
Psat5g212440 Pisum sativum HOM05D002214 ORTHO05D007367 1.2e-54 217.6 226 50.4
Ca_24837_v3 Cicer arietinum L. HOM05D002214 ORTHO05D007367 2.7e-54 216.5 236 47.5
Nn7g36334 Nelumbo nucifera HOM05D002214 ORTHO05D007367 2.7e-54 216.5 232 50.0
AUR62023095 Chenopodium quinoa HOM05D002214 ORTHO05D007367 3.9e-53 212.6 222 50.0
Oeu051405.1 Olea europaea HOM05D002214 ORTHO05D007367 2.5e-52 209.9 227 48.5
Phvul.005G035100 Phaseolus vulgaris HOM05D002214 ORTHO05D007367 3.3e-52 209.5 232 48.7
TPR.G14558 Trifolium pratense HOM05D002214 ORTHO05D007367 4.3e-52 209.1 226 47.8
Lj3g0007976 Lotus japonicus HOM05D002214 ORTHO05D007367 7.3e-52 208.4 233 48.1
arahy.Tifrunner.gnm1.ann1.IP56PK Arachis hypogaea HOM05D002214 ORTHO05D007367 9.6e-52 208.0 253 45.1
SGA_v2.0_scaffold5G02954 Striga asiatica HOM05D002214 ORTHO05D007367 2.1e-51 206.8 234 47.4
PGR031G3638 Punica granatum HOM05D002214 ORTHO05D007367 2.8e-51 206.5 270 42.2
Haze_03152 Corylus avellana HOM05D002214 ORTHO05D007367 4.7e-51 205.7 372 37.9
HanXRQChr04g0119861 Helianthus annuus HOM05D002214 ORTHO05D007367 8.1e-51 204.9 241 46.5
arahy.Tifrunner.gnm1.ann1.KRTV89 Arachis hypogaea HOM05D002214 ORTHO05D007367 1.8e-50 203.8 253 44.7
Haze_03149 Corylus avellana HOM05D002214 ORTHO05D007367 2.4e-50 203.4 372 37.6
Cc02_g28820 Coffea canephora HOM05D002214 ORTHO05D007367 5.2e-50 202.2 310 39.0
Migut.N01800 Erythranthe guttata HOM05D002214 ORTHO05D007367 6.9e-50 201.8 250 43.6
Glyma.11G159230 Glycine max HOM05D002214 ORTHO05D007367 2.6e-49 199.9 225 45.8
SalBow6G2835 Salvia bowleyana HOM05D002214 ORTHO05D007367 4.9e-48 195.7 258 44.6
CAN.G909.6 Capsicum annuum HOM05D002214 ORTHO05D007367 1.1e-47 194.5 228 45.2
VMungo1217G0001 Vigna mungo HOM05D002214 ORTHO05D007367 1.1e-47 194.5 228 45.2
Solyc01g087910.4 Solanum lycopersicum HOM05D002214 ORTHO05D007367 6.0e-46 188.7 228 43.9
TAR633G1256 Trochodendron aralioides HOM05D002214 ORTHO05D007367 6.0e-46 188.7 192 51.6
Sopen01g034840 Solanum pennellii HOM05D002214 ORTHO05D007367 1.7e-45 187.2 245 42.9
Lsat_1_v5_gn_7_35840 Lactuca sativa HOM05D002214 ORTHO05D007367 3.0e-45 186.4 243 43.6
DCAR_022375 Daucus carota HOM05D002214 ORTHO05D007367 1.1e-44 184.5 246 43.5
ECA236G0637 Erigeron canadensis HOM05D002214 ORTHO05D001664 2.8e-43 179.9 244 43.9
Dinv07431 Davidia involucrata HOM05D002214 ORTHO05D005113 1.4e-42 177.6 152 59.2
QL04p010068 Quercus lobata HOM05D002214 ORTHO05D007367 2.4e-42 176.8 178 53.4
unitig_22.g5896 Utricularia gibba HOM05D002214 ORTHO05D007367 2.4e-42 176.8 243 39.1
QL04p010195 Quercus lobata HOM05D002214 ORTHO05D007367 1.5e-41 174.1 236 43.6
Atru.chr11.2515 Acer truncatum HOM05D002214 ORTHO05D007367 4.9e-40 169.1 223 42.6
ClCG09G004430 Citrullus lanatus HOM05D002214 ORTHO05D007367 1.1e-39 167.9 201 45.8
PSO339G3363 Papaver somniferum HOM05D002214 ORTHO05D007367 2.4e-39 166.8 232 44.0
PSO384G3385 Papaver somniferum HOM05D002214 ORTHO05D007367 2.4e-39 166.8 227 44.1
ATR0782G063 Amborella trichopoda HOM05D002214 ORTHO05D007367 7.1e-39 165.2 238 39.9
MBI03_g28525_MAGBIO Magnolia biondii HOM05D002214 ORTHO05D007367 7.1e-39 165.2 231 41.1
Ah.16g100650 Amaranthus hybridus HOM05D002214 ORTHO05D007367 1.6e-38 164.1 161 49.7
Zm00001eb091260 Zea mays HOM05D002214 ORTHO05D007367 2.7e-38 163.3 223 43.0
HPP92_021380 Vanilla planifolia HOM05D002214 ORTHO05D007367 7.9e-38 161.8 226 38.9
Aa31LG10G14890 Aethionema arabicum HOM05D002214 ORTHO05D007367 1.5e-36 157.5 175 46.3
FvH4_2g17890 Fragaria vesca HOM05D002214 ORTHO05D007367 4.3e-36 156.0 244 42.6
FAN24G1013 Fragaria x ananassa HOM05D002214 ORTHO05D007367 4.3e-36 156.0 244 42.6
Peaxi162Scf01270g00126 Petunia axillaris HOM05D002214 ORTHO05D007367 7.4e-36 155.2 244 38.5
FAN06G2164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.3e-35 154.5 259 39.0
RcHm_v2.0_Chr6g0283161 Rosa chinensis HOM05D002214 ORTHO05D007367 1.3e-35 154.5 236 41.1
FAN15G3441 Fragaria x ananassa HOM05D002214 ORTHO05D007367 3.7e-35 152.9 240 42.5
Os11g0182400 Oryza sativa ssp. japonica HOM05D002214 ORTHO05D007367 1.1e-34 151.4 226 38.5
FAN24G2408 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.0e-33 147.1 240 40.4
FAN27G1816 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.1e-31 141.4 245 40.0
EL10Ac2g04369 Beta vulgaris HOM05D002214 ORTHO05D007367 2.1e-30 137.1 178 42.1
Nitab4.5_0001244g0060 Nicotiana tabacum HOM05D002214 ORTHO05D007367 1.8e-29 134.0 220 35.5
Gohir.D08G163300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 6.7e-29 132.1 128 52.3
Nitab4.5_0008942g0050 Nicotiana tabacum HOM05D002214 ORTHO05D007367 3.3e-28 129.8 241 34.9
Hund16632 Selenicereus undatus HOM05D002214 ORTHO05D007367 1.3e-27 127.9 117 54.7
FvH4_7g01770 Fragaria vesca HOM05D002214 ORTHO05D007367 2.4e-26 123.6 122 52.5
FAN27G1164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.6e-25 120.2 226 36.3
QL04p010150 Quercus lobata HOM05D002214 ORTHO05D007367 1.0e-21 108.2 178 39.9
Hma1.2p1_0685F.1_g203250 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 9.7e-20 101.7 99 51.5
QL04p010120 Quercus lobata HOM05D002214 ORTHO05D007367 2.8e-19 100.1 144 43.1
AUR62009418 Chenopodium quinoa HOM05D002214 ORTHO05D007367 4.5e-17 92.8 219 29.7
COL.COLO4_12334 Corchorus olitorius HOM05D000031 ORTHO05D000030 5.0e-16 89.4 146 35.6
Thecc.01G405700 Theobroma cacao HOM05D002214 ORTHO05D007367 5.1e-13 79.3 58 62.1
Pp3c8_19810 Physcomitrium patens HOM05D002214 ORTHO05D007367 8.8e-13 78.6 225 28.0
SEGI_30351 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 3.3e-12 76.6 63 52.4
FAN27G0150 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.8e-11 73.6 118 38.1
AagrBONN_evm.TU.Sc2ySwM_344.2511 Anthoceros agrestis HOM05D002214 ORTHO05D007367 3.7e-11 73.2 252 23.8
Lj9C641T18 Lonicera japonica HOM05D002214 ORTHO05D007367 1.1e-10 71.6 104 41.3
SMO137G0282 Selaginella moellendorffii HOM05D002214 ORTHO05D007367 6.9e-10 68.9 221 25.3
SEGI_07097 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 2.6e-09 67.0 113 34.5
Mapoly0009s0234 Marchantia polymorpha HOM05D002214 ORTHO05D007367 5.0e-08 62.8 235 22.6
MELO3C023585.2 Cucumis melo HOM05D002214 ORTHO05D007367 2.5e-07 60.5 114 33.3
Atru.chr11.2520 Acer truncatum HOM05D002214 ORTHO05D007367 2.7e-06 57.0 32 78.1
CBR_g46897 Chara braunii HOM05D002214 ORTHO05D007367 3.6e-06 56.6 259 22.8


User provided reference genes

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