Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc117.17 Carica papaya HOM05D006898 ORTHO05D008506 1.1e-125 453.4 228 100.0
MD15G1110800 Malus domestica HOM05D006898 ORTHO05D008506 1.0e-75 287.3 211 73.0
Atru.chr7.2715 Acer truncatum HOM05D006898 ORTHO05D008506 2.9e-75 285.8 209 72.2
FvH4_2g30630 Fragaria vesca HOM05D006898 ORTHO05D008506 2.9e-75 285.8 211 72.5
FAN15G2927 Fragaria x ananassa HOM05D006898 ORTHO05D008506 2.9e-75 285.8 211 72.5
Prupe.1G463000 Prunus persica HOM05D006898 ORTHO05D008506 3.8e-75 285.4 211 72.0
FAN24G1534 Fragaria x ananassa HOM05D006898 ORTHO05D008506 5.0e-75 285.0 211 72.0
RcHm_v2.0_Chr6g0312281 Rosa chinensis HOM05D006898 ORTHO05D008506 6.5e-75 284.6 211 72.0
Gohir.D07G001300 Gossypium hirsutum HOM05D006898 ORTHO05D008506 1.9e-74 283.1 209 71.3
MD08G1133300 Malus domestica HOM05D006898 ORTHO05D008506 1.9e-74 283.1 211 71.6
QL12p024620 Quercus lobata HOM05D006898 ORTHO05D008506 2.5e-74 282.7 213 70.9
Gorai.001G001000 Gossypium raimondii HOM05D006898 ORTHO05D008506 3.2e-74 282.3 209 71.8
Psat6g031720 Pisum sativum HOM05D006898 ORTHO05D008506 3.2e-74 282.3 210 71.9
Thecc.09G001800 Theobroma cacao HOM05D006898 ORTHO05D008506 9.4e-74 280.8 212 70.8
Hma1.2p1_0214F.1_g090725 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 1.2e-73 280.4 209 69.9
Dinv09447 Davidia involucrata HOM05D006898 ORTHO05D008506 1.6e-73 280.0 213 71.4
COL.COLO4_18635 Corchorus olitorius HOM05D006898 ORTHO05D008506 6.1e-73 278.1 210 71.0
Lj8A413G21 Lonicera japonica HOM05D006898 ORTHO05D008506 7.9e-73 277.7 214 69.6
Glyma.14G132300 Glycine max HOM05D006898 ORTHO05D008506 1.0e-72 277.3 210 73.3
Duzib168G1571 Durio zibethinus HOM05D006898 ORTHO05D008506 1.8e-72 276.6 210 70.5
Glyma.11G174910 Glycine max HOM05D006898 ORTHO05D008506 1.8e-72 276.6 209 71.3
Ciclev10008259m.g Citrus clementina HOM05D006898 ORTHO05D008506 2.3e-72 276.2 209 70.3
Gohir.A07G000900 Gossypium hirsutum HOM05D006898 ORTHO05D008506 3.0e-72 275.8 209 69.9
Phvul.001G057500 Phaseolus vulgaris HOM05D006898 ORTHO05D008506 3.0e-72 275.8 209 70.3
CsaV3_3G046900 Cucumis sativus L. HOM05D006898 ORTHO05D008506 3.9e-72 275.4 209 69.9
VMungo0647G2166 Vigna mungo HOM05D006898 ORTHO05D008506 3.9e-72 275.4 209 70.3
TWI31G0903 Tripterygium wilfordii HOM05D006898 ORTHO05D008506 5.1e-72 275.0 212 69.8
FAN20G0784 Fragaria x ananassa HOM05D006898 ORTHO05D008506 1.1e-71 273.9 211 70.1
Potri.005G179700 Populus trichocarpa HOM05D006898 ORTHO05D008506 1.1e-71 273.9 209 68.9
ClCG05G017390 Citrullus lanatus HOM05D006898 ORTHO05D008506 2.5e-71 272.7 209 69.9
Medtr1g010070 Medicago truncatula HOM05D006898 ORTHO05D008506 2.5e-71 272.7 210 71.0
TPR.G12020 Trifolium pratense HOM05D006898 ORTHO05D008506 3.3e-71 272.3 211 70.1
CANSAT21G1714 Cannabis sativa HOM05D006898 ORTHO05D008506 5.7e-71 271.6 210 72.4
arahy.Tifrunner.gnm1.ann1.UC5PKR Arachis hypogaea HOM05D006898 ORTHO05D008506 7.4e-71 271.2 209 69.4
CiPaw.07G215200 Carya illinoinensis HOM05D006898 ORTHO05D008506 7.4e-71 271.2 209 68.9
arahy.Tifrunner.gnm1.ann1.TJ47BC Arachis hypogaea HOM05D006898 ORTHO05D008506 9.7e-71 270.8 209 69.4
DCAR_004547 Daucus carota HOM05D006898 ORTHO05D008506 1.7e-70 270.0 214 67.3
AL6G21470 Arabidopsis lyrata HOM05D006898 ORTHO05D008506 2.8e-70 269.2 215 66.5
Eucgr.C02146 Eucalyptus grandis HOM05D006898 ORTHO05D008506 2.8e-70 269.2 208 68.3
Ca_12885_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 3.7e-70 268.9 209 68.9
Nn5g26940 Nelumbo nucifera HOM05D006898 ORTHO05D008506 6.3e-70 268.1 209 69.9
Actinidia03566 Actinidia chinensis HOM05D006898 ORTHO05D008506 1.1e-69 267.3 209 68.9
ECA246G1941 Erigeron canadensis HOM05D006898 ORTHO05D008506 1.1e-69 267.3 219 64.8
Lj5g0012927 Lotus japonicus HOM05D006898 ORTHO05D008506 1.1e-69 267.3 209 68.9
Sp6g32580 Schrenkiella parvula HOM05D006898 ORTHO05D008506 1.1e-69 267.3 210 67.1
THA.LOC104824957 Tarenaya hassleriana HOM05D006898 ORTHO05D008506 1.1e-69 267.3 209 67.5
vmacro05087 Vaccinium macrocarpon HOM05D006898 ORTHO05D008506 1.1e-69 267.3 210 67.6
A10p26780 Brassica napus HOM05D006898 ORTHO05D008506 1.4e-69 266.9 210 67.1
Haze_21680 Corylus avellana HOM05D006898 ORTHO05D008506 1.4e-69 266.9 203 70.4
Sed0005742 Sechium edule HOM05D006898 ORTHO05D008506 1.4e-69 266.9 212 65.6
MELO3C003647.2 Cucumis melo HOM05D006898 ORTHO05D008506 1.8e-69 266.5 209 68.4
AT5G10910 Arabidopsis thaliana HOM05D006898 ORTHO05D008506 2.4e-69 266.2 215 66.0
Lalb_Chr22g0361311 Lupinus albus HOM05D006898 ORTHO05D008506 3.1e-69 265.8 209 68.9
Rhsim07G0174000 Rhododendron simsii HOM05D006898 ORTHO05D008506 3.1e-69 265.8 210 67.1
C09p65920 Brassica napus HOM05D006898 ORTHO05D008506 5.3e-69 265.0 210 66.2
BolC9t59415H Brassica oleracea HOM05D006898 ORTHO05D008506 6.9e-69 264.6 210 66.2
HanXRQChr17g0538631 Helianthus annuus HOM05D006898 ORTHO05D008506 6.9e-69 264.6 211 66.8
CARHR202380 Cardamine hirsuta HOM05D006898 ORTHO05D008506 1.5e-68 263.5 211 65.9
AUR62028029 Chenopodium quinoa HOM05D006898 ORTHO05D008506 1.5e-68 263.5 210 67.1
BcaC04g19278 Brassica carinata HOM05D006898 ORTHO05D008506 2.0e-68 263.1 210 65.7
AUR62020696 Chenopodium quinoa HOM05D006898 ORTHO05D008506 2.0e-68 263.1 210 67.1
Thhalv10013596m.g Eutrema salsugineum HOM05D006898 ORTHO05D008506 2.0e-68 263.1 210 65.7
Lsat_1_v5_gn_3_25521 Lactuca sativa HOM05D006898 ORTHO05D008506 2.0e-68 263.1 205 70.2
Aa31LG3G16210 Aethionema arabicum HOM05D004194 ORTHO05D005641 2.6e-68 262.7 210 66.2
Migut.A00518 Erythranthe guttata HOM05D006898 ORTHO05D008506 3.4e-68 262.3 210 67.6
Lj8C418G2 Lonicera japonica HOM05D006898 ORTHO05D008506 5.9e-68 261.5 203 68.5
TAR383G0625 Trochodendron aralioides HOM05D006898 ORTHO05D008506 5.9e-68 261.5 210 68.1
Aqoxy7G02535 Aquilegia oxysepala HOM05D006898 ORTHO05D008506 7.7e-68 261.2 211 66.4
EL10Ac2g03651 Beta vulgaris HOM05D006898 ORTHO05D008506 7.7e-68 261.2 210 67.1
Carub.0006s0940 Capsella rubella HOM05D006898 ORTHO05D008506 1.0e-67 260.8 215 65.1
Manes.02G165600 Manihot esculenta HOM05D006898 ORTHO05D008506 1.0e-67 260.8 203 68.0
Os02g0137600 Oryza sativa ssp. japonica HOM05D006898 ORTHO05D008506 1.3e-67 260.4 208 66.3
PGSC0003DMG400003978 Solanum tuberosum HOM05D006898 ORTHO05D008506 1.7e-67 260.0 210 67.1
CAN.G476.10 Capsicum annuum HOM05D006898 ORTHO05D008506 3.8e-67 258.8 210 66.7
Peaxi162Scf00025g02821 Petunia axillaris HOM05D006898 ORTHO05D008506 3.8e-67 258.8 210 66.2
Oeu007490.1 Olea europaea HOM05D006898 ORTHO05D008506 5.0e-67 258.5 209 66.0
BraA10t44732Z Brassica rapa HOM05D004194 ORTHO05D005641 6.5e-67 258.1 206 66.0
GSVIVG01035599001 Vitis vinifera HOM05D006898 ORTHO05D008506 6.5e-67 258.1 209 67.9
Ah.10g033620 Amaranthus hybridus HOM05D006898 ORTHO05D008506 2.5e-66 256.1 213 63.8
Nitab4.5_0001582g0070 Nicotiana tabacum HOM05D006898 ORTHO05D008506 2.5e-66 256.1 210 65.2
Solyc11g005580.1 Solanum lycopersicum HOM05D006898 ORTHO05D008506 2.5e-66 256.1 210 65.7
CDE06G0577 Ceratophyllum demersum HOM05D006898 ORTHO05D008506 7.2e-66 254.6 213 65.3
Hund19373 Selenicereus undatus HOM05D006898 ORTHO05D008506 7.2e-66 254.6 212 64.6
Sopen11g001550 Solanum pennellii HOM05D006898 ORTHO05D008506 7.2e-66 254.6 210 65.7
CSS0039012 Camellia sinensis var. sinensis HOM05D006898 ORTHO05D008506 9.4e-66 254.2 216 63.9
Nitab4.5_0002138g0020 Nicotiana tabacum HOM05D006898 ORTHO05D008506 1.2e-65 253.8 210 65.2
Sc06g0001380 Simmondsia chinensis HOM05D006898 ORTHO05D008506 1.6e-65 253.4 212 64.2
Sabra05G0135900 Salix brachista HOM05D006898 ORTHO05D008506 3.6e-65 252.3 242 55.8
PGR142G0710 Punica granatum HOM05D006898 ORTHO05D008506 4.7e-65 251.9 213 64.8
ATR0626G384 Amborella trichopoda HOM05D006898 ORTHO05D008506 3.9e-64 248.8 209 61.7
PSO170G2692 Papaver somniferum HOM05D006898 ORTHO05D008506 2.6e-63 246.1 213 65.3
PSO017G3342 Papaver somniferum HOM05D006898 ORTHO05D008506 3.3e-63 245.7 211 64.9
unitig_748.g8163 Utricularia gibba HOM05D006898 ORTHO05D008506 9.7e-63 244.2 209 62.7
HPP92_018578 Vanilla planifolia HOM05D006898 ORTHO05D008506 1.3e-62 243.8 213 62.4
SGA_v2.0_scaffold27G11702 Striga asiatica HOM05D006898 ORTHO05D008506 1.7e-62 243.4 218 62.4
HPP92_018581 Vanilla planifolia HOM05D006898 ORTHO05D008506 2.2e-62 243.0 213 62.0
SalBow4G3225 Salvia bowleyana HOM05D006898 ORTHO05D008506 8.2e-62 241.1 210 61.9
Cc03_g11200 Coffea canephora HOM05D006898 ORTHO05D008506 4.1e-61 238.8 204 65.7
FAN20G2020 Fragaria x ananassa HOM05D006898 ORTHO05D008506 3.0e-56 222.6 185 65.9
Glyma.17G200800 Glycine max HOM05D006898 ORTHO05D008506 1.7e-51 206.8 143 74.1
Mapoly0071s0027 Marchantia polymorpha HOM05D006898 ORTHO05D008506 6.8e-48 194.9 230 49.6
Pp3c15_22340 Physcomitrium patens HOM05D006898 ORTHO05D008506 3.8e-43 179.1 225 49.8
Cre13.g568150 Chlamydomonas reinhardtii HOM05D006898 ORTHO05D008506 8.6e-35 151.4 210 45.2
MCO14G201 Micromonas commoda HOM05D006898 ORTHO05D008506 6.1e-33 145.2 208 39.4
SMO119G0345 Selaginella moellendorffii HOM05D006898 ORTHO05D008506 1.3e-30 137.5 209 43.5
PRCOL_00004989 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 1.6e-28 130.6 214 37.9
QL07p037905 Quercus lobata HOM05D006898 ORTHO05D008506 2.9e-27 126.3 72 84.7
AagrBONN_evm.TU.Sc2ySwM_228.2079 Anthoceros agrestis HOM05D006898 ORTHO05D008506 1.0e-19 101.3 107 52.3
CBR_g40185 Chara braunii HOM05D000019 ORTHO05D001702 1.3e-19 100.9 178 42.1
AagrBONN_evm.TU.Sc2ySwM_362.1618 Anthoceros agrestis HOM05D006898 ORTHO05D008506 1.2e-17 94.4 86 57.0
VMungo1309G1975 Vigna mungo HOM05D006898 ORTHO05D008506 8.1e-17 91.7 118 49.2
Ca_29432_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 2.3e-11 73.6 126 37.3


User provided reference genes

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