Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc116.26 Carica papaya HOM05D005540 ORTHO05D006932 1.4e-94 349.7 196 100.0
BcaC02g09619 Brassica carinata HOM05D005540 ORTHO05D006932 1.0e-60 237.3 120 93.3
A04p11070 Brassica napus HOM05D005540 ORTHO05D006932 1.0e-60 237.3 120 93.3
C04p44790 Brassica napus HOM05D005540 ORTHO05D006932 1.0e-60 237.3 120 93.3
BolC4t26053H Brassica oleracea HOM05D005540 ORTHO05D006932 1.0e-60 237.3 120 93.3
BraA04t16769Z Brassica rapa HOM05D005540 ORTHO05D006932 1.0e-60 237.3 120 93.3
Thhalv10027854m.g Eutrema salsugineum HOM05D005540 ORTHO05D006932 1.7e-60 236.5 120 92.5
BcaB06g27151 Brassica carinata HOM05D005540 ORTHO05D006932 3.9e-60 235.3 120 92.5
Dinv14871 Davidia involucrata HOM05D005540 ORTHO05D006932 6.6e-60 234.6 120 92.5
Sp7g04170 Schrenkiella parvula HOM05D005540 ORTHO05D006932 1.5e-59 233.4 120 91.7
Lalb_Chr18g0053271 Lupinus albus HOM05D005540 ORTHO05D006932 1.9e-59 233.0 120 92.5
THA.LOC104822414 Tarenaya hassleriana HOM05D005540 ORTHO05D006932 1.9e-59 233.0 120 92.5
COL.COLO4_15705 Corchorus olitorius HOM05D005540 ORTHO05D006932 2.5e-59 232.6 120 91.7
Eucgr.F02818 Eucalyptus grandis HOM05D005540 ORTHO05D006932 3.3e-59 232.3 120 91.7
Atru.chr4.1672 Acer truncatum HOM05D005540 ORTHO05D006932 4.3e-59 231.9 120 91.7
Actinidia39198 Actinidia chinensis HOM05D005540 ORTHO05D006932 4.3e-59 231.9 120 91.7
CSS0010845 Camellia sinensis var. sinensis HOM05D005540 ORTHO05D006932 4.3e-59 231.9 120 91.7
Glyma.11G218700 Glycine max HOM05D005540 ORTHO05D006932 7.3e-59 231.1 120 91.7
PGR004G0611 Punica granatum HOM05D005540 ORTHO05D006932 7.3e-59 231.1 120 90.8
Duzib138G0816 Durio zibethinus HOM05D005540 ORTHO05D006932 9.5e-59 230.7 120 90.8
Carub.0007s3304 Capsella rubella HOM05D005540 ORTHO05D006932 1.2e-58 230.3 120 89.2
Cfa007847 Carpinus fangiana HOM05D005540 ORTHO05D006932 1.2e-58 230.3 120 91.7
Thecc.04G122100 Theobroma cacao HOM05D005540 ORTHO05D006932 1.2e-58 230.3 120 90.8
FvH4_1g24900 Fragaria vesca HOM05D005540 ORTHO05D006932 1.6e-58 229.9 120 91.7
Lsat_1_v5_gn_0_4201 Lactuca sativa HOM05D005540 ORTHO05D006932 1.6e-58 229.9 120 91.7
TAR629G0151 Trochodendron aralioides HOM05D005540 ORTHO05D006932 2.1e-58 229.6 120 90.8
Medtr5g079730 Medicago truncatula HOM05D005540 ORTHO05D006932 2.8e-58 229.2 120 89.2
TPR.G3482 Trifolium pratense HOM05D005540 ORTHO05D006932 2.8e-58 229.2 120 89.2
Ca_05867_v3 Cicer arietinum L. HOM05D005540 ORTHO05D006932 3.6e-58 228.8 120 88.3
Migut.H00866 Erythranthe guttata HOM05D005540 ORTHO05D006932 3.6e-58 228.8 120 89.2
Prupe.3G158100 Prunus persica HOM05D005540 ORTHO05D006932 3.6e-58 228.8 120 90.8
MSTRG.23613 Avicennia marina HOM05D005540 ORTHO05D006932 4.7e-58 228.4 120 89.2
CiPaw.03G067900 Carya illinoinensis HOM05D005540 ORTHO05D006932 4.7e-58 228.4 120 91.7
FAN28G0493 Fragaria x ananassa HOM05D005540 ORTHO05D006932 4.7e-58 228.4 120 91.7
VMungo1383G3344 Vigna mungo HOM05D005540 ORTHO05D006932 4.7e-58 228.4 120 90.0
AT5G37850 Arabidopsis thaliana HOM05D005540 ORTHO05D006932 6.2e-58 228.0 120 90.0
CsaV3_3G021680 Cucumis sativus L. HOM05D005540 ORTHO05D006932 6.2e-58 228.0 120 90.8
CARHR214890 Cardamine hirsuta HOM05D005540 ORTHO05D006932 8.1e-58 227.6 120 89.2
Glyma.18G038600 Glycine max HOM05D005540 ORTHO05D006932 8.1e-58 227.6 120 90.0
Aa31LG9G17310 Aethionema arabicum HOM05D005540 ORTHO05D006932 1.4e-57 226.9 120 87.5
CANSAT78G2033 Cannabis sativa HOM05D005540 ORTHO05D006932 1.4e-57 226.9 120 90.0
PSO017G2970 Papaver somniferum HOM05D005540 ORTHO05D006932 1.4e-57 226.9 120 90.0
Potri.017G129000 Populus trichocarpa HOM05D005540 ORTHO05D006932 1.4e-57 226.9 120 88.3
ECA232G3523 Erigeron canadensis HOM05D005540 ORTHO05D006932 1.8e-57 226.5 120 90.0
Gohir.A11G161800 Gossypium hirsutum HOM05D005540 ORTHO05D006932 1.8e-57 226.5 120 90.0
Gohir.D11G168100 Gossypium hirsutum HOM05D005540 ORTHO05D006932 2.4e-57 226.1 120 89.2
Gorai.007G179400 Gossypium raimondii HOM05D005540 ORTHO05D006932 2.4e-57 226.1 120 89.2
Sc14g0004860 Simmondsia chinensis HOM05D005540 ORTHO05D006932 4.0e-57 225.3 120 88.3
Solyc02g091340.4 Solanum lycopersicum HOM05D005540 ORTHO05D006932 4.0e-57 225.3 120 90.0
Sopen02g035960 Solanum pennellii HOM05D005540 ORTHO05D006932 4.0e-57 225.3 120 90.0
LjContig00141g0003223 Lotus japonicus HOM05D005540 ORTHO05D006932 5.2e-57 224.9 120 87.5
Phvul.001G232200 Phaseolus vulgaris HOM05D005540 ORTHO05D006932 5.2e-57 224.9 120 89.2
Psat2g040920 Pisum sativum HOM05D005540 ORTHO05D006932 6.8e-57 224.6 120 86.7
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 6.8e-57 224.6 120 88.3
PSO478G5258 Papaver somniferum HOM05D005540 ORTHO05D006932 8.9e-57 224.2 120 88.3
Sed0009967 Sechium edule HOM05D005540 ORTHO05D006932 8.9e-57 224.2 120 89.2
TWI77G0639 Tripterygium wilfordii HOM05D005540 ORTHO05D006932 8.9e-57 224.2 120 86.7
Sed0014193 Sechium edule HOM05D005540 ORTHO05D006932 1.2e-56 223.8 120 90.8
Manes.07G054300 Manihot esculenta HOM05D005540 ORTHO05D006932 2.0e-56 223.0 120 86.7
Ciclev10012086m.g Citrus clementina HOM05D005540 ORTHO05D006932 2.6e-56 222.6 120 88.3
RcHm_v2.0_Chr2g0122561 Rosa chinensis HOM05D005540 ORTHO05D006932 3.4e-56 222.2 129 84.5
Aqoxy3G00138 Aquilegia oxysepala HOM05D005540 ORTHO05D006932 4.4e-56 221.9 120 88.3
SEGI_01535 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 4.4e-56 221.9 120 86.7
AL7G46750 Arabidopsis lyrata HOM05D005540 ORTHO05D006932 5.8e-56 221.5 120 87.5
HPP92_024102 Vanilla planifolia HOM05D005540 ORTHO05D006932 9.9e-56 220.7 123 84.6
QL11p004195 Quercus lobata HOM05D005540 ORTHO05D006932 1.7e-55 219.9 136 80.1
HPP92_024131 Vanilla planifolia HOM05D005540 ORTHO05D006932 1.7e-55 219.9 167 67.7
ClCG05G010900 Citrullus lanatus HOM05D005540 ORTHO05D006932 2.2e-55 219.5 130 83.8
GSVIVG01030869001 Vitis vinifera HOM05D005540 ORTHO05D006932 3.8e-55 218.8 120 87.5
Zm00001eb135500 Zea mays HOM05D005540 ORTHO05D006932 3.8e-55 218.8 120 85.0
Os12g0600400 Oryza sativa ssp. japonica HOM05D005540 ORTHO05D006932 1.1e-54 217.2 120 84.2
Nitab4.5_0004399g0070 Nicotiana tabacum HOM05D005540 ORTHO05D006932 1.4e-54 216.9 144 75.7
vmacro18057 Vaccinium macrocarpon HOM05D005540 ORTHO05D006932 1.4e-54 216.9 130 80.0
ATR0686G023 Amborella trichopoda HOM05D005540 ORTHO05D006932 1.9e-54 216.5 119 84.0
Cc07_g08210 Coffea canephora HOM05D005540 ORTHO05D006932 3.2e-54 215.7 125 84.0
Atru.BG.179.p Acer truncatum HOM05D005540 ORTHO05D006932 4.2e-54 215.3 124 86.3
CAN.G625.83 Capsicum annuum HOM05D005540 ORTHO05D006932 4.2e-54 215.3 120 87.5
Dinv19006 Davidia involucrata HOM05D005540 ORTHO05D006932 7.1e-54 214.5 120 87.5
Lsat_1_v5_gn_4_154720 Lactuca sativa HOM05D005540 ORTHO05D006932 1.2e-53 213.8 155 71.6
Sabra17G0107500 Salix brachista HOM05D005540 ORTHO05D006932 1.6e-53 213.4 133 79.7
Nitab4.5_0002248g0040 Nicotiana tabacum HOM05D005540 ORTHO05D006932 3.5e-53 212.2 144 75.0
Pp3c7_20600 Physcomitrium patens HOM05D005540 ORTHO05D006932 1.0e-52 210.7 119 84.0
Oeu030810.1 Olea europaea HOM05D005540 ORTHO05D006932 1.3e-52 210.3 130 79.2
arahy.Tifrunner.gnm1.ann1.32A9M8 Arachis hypogaea HOM05D005540 ORTHO05D006932 1.1e-51 207.2 147 72.1
Lj4A178T43 Lonicera japonica HOM05D005540 ORTHO05D006932 1.9e-51 206.5 146 74.7
Rhsim08G0085100 Rhododendron simsii HOM05D005540 ORTHO05D006932 9.6e-51 204.1 168 65.5
AagrBONN_evm.TU.Sc2ySwM_344.3276 Anthoceros agrestis HOM05D005540 ORTHO05D006932 2.1e-50 203.0 120 79.2
Pp3c11_8570 Physcomitrium patens HOM05D005540 ORTHO05D006932 3.6e-50 202.2 119 79.8
CBR_g12736 Chara braunii HOM05D005540 ORTHO05D006932 1.4e-49 200.3 120 77.5
CDE06G0494 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 2.4e-49 199.5 130 76.2
Sed0021451 Sechium edule HOM05D005540 ORTHO05D006932 4.0e-49 198.7 120 78.3
Mapoly0043s0025 Marchantia polymorpha HOM05D005540 ORTHO05D006932 5.3e-49 198.4 120 76.7
Sed0017329 Sechium edule HOM05D005540 ORTHO05D006932 2.2e-47 193.0 120 75.8
arahy.Tifrunner.gnm1.ann1.A8AWVV Arachis hypogaea HOM05D005540 ORTHO05D006932 1.9e-46 189.9 120 79.2
arahy.Tifrunner.gnm1.ann1.IJ36EI Arachis hypogaea HOM05D005540 ORTHO05D006932 1.9e-46 189.9 120 79.2
SMO117G0213 Selaginella moellendorffii HOM05D005540 ORTHO05D006932 1.6e-45 186.8 118 74.6
EL10Ac2g04488 Beta vulgaris HOM05D005540 ORTHO05D006932 6.0e-45 184.9 120 77.5
Nn4g24119 Nelumbo nucifera HOM05D005540 ORTHO05D006932 5.6e-43 178.3 111 76.6
MCO05G093 Micromonas commoda HOM05D005540 ORTHO05D006932 4.8e-42 175.3 120 70.0
Nn3g18203 Nelumbo nucifera HOM05D005540 ORTHO05D006932 6.2e-42 174.9 95 86.3
Peaxi162Scf00803g00528 Petunia axillaris HOM05D005540 ORTHO05D006932 1.8e-41 173.3 97 85.6
Duzib133G1255 Durio zibethinus HOM05D005540 ORTHO05D006932 9.0e-41 171.0 120 71.7
Haze_14219 Corylus avellana HOM05D005540 ORTHO05D006932 1.3e-39 167.2 93 87.1
MD12G1075700 Malus domestica HOM05D005540 ORTHO05D006932 4.9e-39 165.2 87 89.7
FAN23G2620 Fragaria x ananassa HOM05D005540 ORTHO05D006932 6.4e-39 164.9 88 89.8
Ah.10g037980 Amaranthus hybridus HOM05D005540 ORTHO05D006932 1.1e-38 164.1 98 79.6
CDE04G3097 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 1.9e-38 163.3 120 69.2
Cre03.g173800 Chlamydomonas reinhardtii HOM05D005540 ORTHO05D006932 2.4e-38 162.9 116 66.4
SalBow3G0445 Salvia bowleyana HOM05D005540 ORTHO05D006932 5.4e-38 161.8 91 84.6
SGA_v2.0_scaffold49G18144 Striga asiatica HOM05D005540 ORTHO05D006932 1.2e-37 160.6 88 84.1
AUR62023244 Chenopodium quinoa HOM05D005540 ORTHO05D006932 1.8e-36 156.8 103 73.8
Hma1.2p1_0283F.1_g113550 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 1.4e-33 147.1 120 65.0
MBI16_g05922_MAGBIO Magnolia biondii HOM05D005540 ORTHO05D006932 3.4e-32 142.5 80 85.0
Atru.chr4.2426 Acer truncatum HOM05D005540 ORTHO05D006932 6.7e-28 128.3 66 90.9
SHI09520 Sapria himalayana HOM05D005540 ORTHO05D006932 7.4e-27 124.8 70 82.9
FAN26G0473 Fragaria x ananassa HOM05D005540 ORTHO05D006932 5.8e-24 115.2 63 87.3
MELO3C031731.2 Cucumis melo HOM05D005540 ORTHO05D006932 8.4e-23 111.3 63 85.7
MELO3C020384.2 Cucumis melo HOM05D005540 ORTHO05D006932 2.7e-21 106.3 70 72.9
DCAR_025877 Daucus carota HOM05D005540 ORTHO05D006932 5.7e-19 98.6 55 85.5
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 3.1e-17 92.8 110 41.8
Haze_26639 Corylus avellana HOM05D005540 ORTHO05D006932 2.9e-15 86.3 95 43.2
Cfa022314 Carpinus fangiana HOM05D005540 ORTHO05D006932 2.5e-14 83.2 118 39.0
FAN26G3341 Fragaria x ananassa HOM05D005540 ORTHO05D006932 1.1e-11 74.3 35 94.3
AUR62023196 Chenopodium quinoa HOM05D005540 ORTHO05D006932 5.7e-11 72.0 33 97.0
SalBow3G4194 Salvia bowleyana HOM05D005540 ORTHO05D006932 1.7e-10 70.5 33 93.9
Hma1.2p1_0179F.1_g079130 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 2.8e-10 69.7 33 90.9
Hma1.2p1_0179F.1_g079120 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 1.4e-09 67.4 32 93.8
SHI09501 Sapria himalayana HOM05D005540 ORTHO05D006932 1.4e-06 57.4 55 54.5
SHI09525 Sapria himalayana HOM05D005540 ORTHO05D006932 4.2e-06 55.8 37 73.0


User provided reference genes

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