Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc114.35 Carica papaya HOM05D005749 ORTHO05D007208 5.5e-60 234.2 124 100.0
RcHm_v2.0_Chr3g0468141 Rosa chinensis HOM05D005749 ORTHO05D007208 5.5e-52 207.6 121 88.4
Gohir.D01G207000 Gossypium hirsutum HOM05D005749 ORTHO05D007208 1.6e-51 206.1 119 89.1
Gorai.002G252100 Gossypium raimondii HOM05D005749 ORTHO05D007208 1.6e-51 206.1 119 89.1
RhsimUnG0120200 Rhododendron simsii HOM05D005749 ORTHO05D007208 2.1e-51 205.7 121 89.3
CiPaw.10G138600 Carya illinoinensis HOM05D005749 ORTHO05D007208 4.6e-51 204.5 115 91.3
Haze_20679 Corylus avellana HOM05D005749 ORTHO05D007208 6.1e-51 204.1 117 90.6
Potri.006G133900 Populus trichocarpa HOM05D005749 ORTHO05D007208 6.1e-51 204.1 115 93.9
QL07p045817 Quercus lobata HOM05D005749 ORTHO05D007208 6.1e-51 204.1 115 93.0
Prupe.6G244800 Prunus persica HOM05D005749 ORTHO05D007208 1.0e-50 203.4 115 91.3
FAN02G1517 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.8e-50 202.6 121 86.8
FAN09G3437 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.8e-50 202.6 121 86.8
FAN09G4246 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.8e-50 202.6 121 86.8
Actinidia11228 Actinidia chinensis HOM05D005749 ORTHO05D007208 2.3e-50 202.2 116 90.5
Ciclev10011952m.g Citrus clementina HOM05D005749 ORTHO05D007208 2.3e-50 202.2 115 91.3
Sc07g0006200 Simmondsia chinensis HOM05D005749 ORTHO05D007208 3.0e-50 201.8 115 90.4
COL.COLO4_10301 Corchorus olitorius HOM05D005749 ORTHO05D007208 3.9e-50 201.4 115 91.3
FvH4_6g14940 Fragaria vesca HOM05D005749 ORTHO05D007208 3.9e-50 201.4 121 86.8
FAN05G4959 Fragaria x ananassa HOM05D005749 ORTHO05D007208 3.9e-50 201.4 121 86.8
FAN14G3553 Fragaria x ananassa HOM05D005749 ORTHO05D007208 3.9e-50 201.4 121 86.8
MD04G1111300 Malus domestica HOM05D005749 ORTHO05D007208 3.9e-50 201.4 115 91.3
Thecc.05G051000 Theobroma cacao HOM05D005749 ORTHO05D007208 3.9e-50 201.4 114 92.1
GSVIVG01025567001 Vitis vinifera HOM05D005749 ORTHO05D007208 3.9e-50 201.4 115 92.2
Dinv35687 Davidia involucrata HOM05D005749 ORTHO05D007208 5.1e-50 201.1 115 89.6
Hma1.2p1_0350F.1_g132660 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 5.1e-50 201.1 115 89.6
THA.LOC104816307 Tarenaya hassleriana HOM05D005749 ORTHO05D007208 8.7e-50 200.3 117 90.6
ClCG04G008720 Citrullus lanatus HOM05D005749 ORTHO05D007208 2.5e-49 198.7 119 84.9
Migut.J00398 Erythranthe guttata HOM05D005749 ORTHO05D007208 3.3e-49 198.4 115 89.6
Gohir.A01G218100 Gossypium hirsutum HOM05D005749 ORTHO05D007208 3.3e-49 198.4 119 85.7
Hund12066 Selenicereus undatus HOM05D005749 ORTHO05D007208 4.3e-49 198.0 119 86.6
CANSAT80G2775 Cannabis sativa HOM05D005749 ORTHO05D007208 9.7e-49 196.8 115 87.8
MELO3C003076.2 Cucumis melo HOM05D005749 ORTHO05D007208 9.7e-49 196.8 119 84.0
Eucgr.K03191 Eucalyptus grandis HOM05D005749 ORTHO05D007208 9.7e-49 196.8 115 89.6
PGR004G0882 Punica granatum HOM05D005749 ORTHO05D007208 9.7e-49 196.8 115 88.7
Solyc10g085980.2 Solanum lycopersicum HOM05D005749 ORTHO05D007208 1.6e-48 196.1 123 85.4
Sopen10g035350 Solanum pennellii HOM05D005749 ORTHO05D007208 1.6e-48 196.1 123 85.4
Aqoxy2G01923 Aquilegia oxysepala HOM05D005749 ORTHO05D007208 2.2e-48 195.7 115 87.8
BcaNung06325 Brassica carinata HOM05D005749 ORTHO05D007208 2.2e-48 195.7 114 91.2
Lalb_Chr20g0112991 Lupinus albus HOM05D005749 ORTHO05D007208 2.2e-48 195.7 115 87.8
CAN.G933.18 Capsicum annuum HOM05D005749 ORTHO05D007208 2.8e-48 195.3 123 84.6
Lsat_1_v5_gn_1_53521 Lactuca sativa HOM05D005749 ORTHO05D007208 2.8e-48 195.3 113 91.2
MBI13_g05975_MAGBIO Magnolia biondii HOM05D005749 ORTHO05D007208 2.8e-48 195.3 117 85.5
Duzib093G1962 Durio zibethinus HOM05D005749 ORTHO05D007208 3.7e-48 194.9 113 87.6
SGA_v2.0_scaffold75G24898 Striga asiatica HOM05D005749 ORTHO05D007208 3.7e-48 194.9 115 88.7
Nitab4.5_0002073g0030 Nicotiana tabacum HOM05D005749 ORTHO05D007208 4.8e-48 194.5 121 86.0
TAR623G1622 Trochodendron aralioides HOM05D005749 ORTHO05D007208 4.8e-48 194.5 115 87.8
Thhalv10013777m.g Eutrema salsugineum HOM05D005749 ORTHO05D007208 6.3e-48 194.1 114 90.4
PGSC0003DMG400017609 Solanum tuberosum HOM05D005749 ORTHO05D007208 6.3e-48 194.1 123 84.6
Nitab4.5_0000754g0010 Nicotiana tabacum HOM05D005749 ORTHO05D007208 8.2e-48 193.7 121 85.1
CSS0045869 Camellia sinensis var. sinensis HOM05D005749 ORTHO05D007208 1.8e-47 192.6 115 87.0
Ca_02301_v3 Cicer arietinum L. HOM05D005749 ORTHO05D007208 1.8e-47 192.6 114 86.8
Medtr1g067200 Medicago truncatula HOM05D005749 ORTHO05D007208 1.8e-47 192.6 114 86.8
DCAR_014958 Daucus carota HOM05D005749 ORTHO05D007208 2.4e-47 192.2 115 86.1
ECA248G2107 Erigeron canadensis HOM05D005749 ORTHO05D007208 2.4e-47 192.2 115 87.8
Lj5g0012474 Lotus japonicus HOM05D005749 ORTHO05D007208 2.4e-47 192.2 115 87.0
A10p25670 Brassica napus HOM05D005749 ORTHO05D007208 4.1e-47 191.4 114 90.4
BraA10t44632Z Brassica rapa HOM05D005749 ORTHO05D007208 4.1e-47 191.4 114 90.4
Sp6g31500 Schrenkiella parvula HOM05D005749 ORTHO05D007208 5.3e-47 191.0 114 89.5
CARHR200990 Cardamine hirsuta HOM05D005749 ORTHO05D007208 9.0e-47 190.3 114 89.5
TPR.G35663 Trifolium pratense HOM05D005749 ORTHO05D007208 9.0e-47 190.3 114 86.8
C09p64740 Brassica napus HOM05D005749 ORTHO05D007208 1.2e-46 189.9 114 89.5
BolC9t59305H Brassica oleracea HOM05D005749 ORTHO05D007208 1.2e-46 189.9 114 89.5
Peaxi162Scf00146g01323 Petunia axillaris HOM05D005749 ORTHO05D007208 1.2e-46 189.9 121 84.3
AT5G12130 Arabidopsis thaliana HOM05D005749 ORTHO05D007208 1.5e-46 189.5 114 88.6
A02p01390 Brassica napus HOM05D005749 ORTHO05D007208 1.5e-46 189.5 114 88.6
C02p05630 Brassica napus HOM05D005749 ORTHO05D007208 1.5e-46 189.5 114 88.6
BolC2t06507H Brassica oleracea HOM05D005749 ORTHO05D007208 1.5e-46 189.5 114 88.6
BraA02t05118Z Brassica rapa HOM05D005749 ORTHO05D007208 1.5e-46 189.5 114 88.6
Carub.0006s1064 Capsella rubella HOM05D005749 ORTHO05D007208 1.5e-46 189.5 114 89.5
Glyma.10G047600 Glycine max HOM05D005749 ORTHO05D007208 1.5e-46 189.5 115 85.2
VMungo0720G0421 Vigna mungo HOM05D005749 ORTHO05D007208 1.5e-46 189.5 115 85.2
Cc06_g03360 Coffea canephora HOM05D005749 ORTHO05D007208 4.5e-46 188.0 115 84.3
Glyma.13G135400 Glycine max HOM05D005749 ORTHO05D007208 4.5e-46 188.0 115 84.3
SalBow3G2006 Salvia bowleyana HOM05D005749 ORTHO05D007208 4.5e-46 188.0 111 87.4
Aa31LG3G15070 Aethionema arabicum HOM05D005749 ORTHO05D007208 5.9e-46 187.6 114 86.0
AUR62016425 Chenopodium quinoa HOM05D005749 ORTHO05D007208 5.9e-46 187.6 115 85.2
AL6G22910 Arabidopsis lyrata HOM05D005749 ORTHO05D007208 7.7e-46 187.2 114 88.6
HanXRQChr11g0349581 Helianthus annuus HOM05D005749 ORTHO05D007208 1.7e-45 186.0 114 86.0
PSO339G5588 Papaver somniferum HOM05D005749 ORTHO05D007208 1.7e-45 186.0 115 84.3
PSO384G0170 Papaver somniferum HOM05D005749 ORTHO05D007208 1.7e-45 186.0 115 84.3
arahy.Tifrunner.gnm1.ann1.SNR3S1 Arachis hypogaea HOM05D005749 ORTHO05D007208 2.2e-45 185.7 151 68.9
CsaV3_4G024440 Cucumis sativus L. HOM05D005749 ORTHO05D007208 2.2e-45 185.7 121 79.3
vmacro20079 Vaccinium macrocarpon HOM05D005749 ORTHO05D007208 2.9e-45 185.3 150 70.0
arahy.Tifrunner.gnm1.ann1.V0P37H Arachis hypogaea HOM05D005749 ORTHO05D007208 3.8e-45 184.9 151 67.5
SEGI_07760 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 3.8e-45 184.9 120 77.5
Lalb_Chr02g0153481 Lupinus albus HOM05D005749 ORTHO05D007208 1.1e-44 183.3 115 82.6
arahy.Tifrunner.gnm1.ann1.F15EJL Arachis hypogaea HOM05D005749 ORTHO05D007208 1.4e-44 183.0 115 80.9
unitig_27.g25368 Utricularia gibba HOM05D005749 ORTHO05D007208 5.5e-44 181.0 114 83.3
HPP92_000647 Vanilla planifolia HOM05D005749 ORTHO05D007208 9.4e-44 180.3 116 80.2
HPP92_000699 Vanilla planifolia HOM05D005749 ORTHO05D007208 9.4e-44 180.3 116 80.2
Cfa017475 Carpinus fangiana HOM05D005749 ORTHO05D007208 2.7e-43 178.7 103 89.3
Lj2A105T62 Lonicera japonica HOM05D005749 ORTHO05D007208 2.3e-42 175.6 129 75.2
SMO201G0179 Selaginella moellendorffii HOM05D005749 ORTHO05D007208 3.9e-42 174.9 114 79.8
Mapoly0068s0066 Marchantia polymorpha HOM05D005749 ORTHO05D007208 2.8e-40 168.7 114 75.4
Pp3c12_18750 Physcomitrium patens HOM05D005749 ORTHO05D007208 4.8e-40 167.9 120 71.7
Os05g0121200 Oryza sativa ssp. japonica HOM05D005749 ORTHO05D007208 8.2e-40 167.2 118 72.9
Zm00001eb265640 Zea mays HOM05D005749 ORTHO05D007208 3.1e-39 165.2 114 73.7
Zm00001eb355290 Zea mays HOM05D005749 ORTHO05D007208 1.2e-38 163.3 113 74.3
AagrBONN_evm.TU.Sc2ySwM_362.1198 Anthoceros agrestis HOM05D005749 ORTHO05D007208 6.5e-37 157.5 116 67.2
Oeu029112.2 Olea europaea HOM05D000267 ORTHO05D000298 3.2e-36 155.2 98 85.7
Actinidia19727 Actinidia chinensis HOM05D005749 ORTHO05D007208 1.2e-35 153.3 86 93.0
Sed0002515 Sechium edule HOM05D005749 ORTHO05D007208 1.0e-34 150.2 96 80.2
MD12G1129500 Malus domestica HOM05D005749 ORTHO05D007208 8.8e-34 147.1 101 80.2
MCO03G081 Micromonas commoda HOM05D005749 ORTHO05D007208 8.2e-32 140.6 114 61.4
ATR0594G051 Amborella trichopoda HOM05D005749 ORTHO05D007208 1.4e-31 139.8 85 83.5
MCO03G201 Micromonas commoda HOM05D005749 ORTHO05D007208 5.3e-31 137.9 112 61.6
Sabra06G0105200 Salix brachista HOM05D005749 ORTHO05D007208 1.6e-30 136.3 127 66.1
PRCOL_00003295 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 2.6e-30 135.6 117 59.0
Cre17.g712400 Chlamydomonas reinhardtii HOM05D005749 ORTHO05D007208 6.1e-27 124.4 109 60.6
Manes.08G001100 Manihot esculenta HOM05D005749 ORTHO05D007208 2.6e-25 119.0 66 95.5
arahy.Tifrunner.gnm1.ann1.R14JEG Arachis hypogaea HOM05D005749 ORTHO05D007208 2.4e-23 112.5 69 82.6
Hma1.2p1_0111F.1_g053580 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 3.1e-23 112.1 72 80.6
Ah.08g212020 Amaranthus hybridus HOM05D005749 ORTHO05D007208 9.1e-23 110.5 132 56.1
PRCOL_00006447 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 9.1e-23 110.5 109 55.0
EL10Ac7g17315 Beta vulgaris HOM05D005749 ORTHO05D007208 3.5e-22 108.6 114 59.6
AUR62011608 Chenopodium quinoa HOM05D005749 ORTHO05D007208 2.2e-21 105.9 115 57.4
CBR_g5606 Chara braunii HOM05D000019 ORTHO05D000002 6.8e-18 94.4 91 50.5
PRCOL_00000418 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 2.6e-17 92.4 102 47.1
Lsat_1_v5_gn_1_79620 Lactuca sativa HOM05D005749 ORTHO05D007208 4.8e-16 88.2 69 72.5
Dinv03750 Davidia involucrata HOM05D005749 ORTHO05D007208 3.1e-15 85.5 46 93.5
Psat6g125120 Pisum sativum HOM05D005749 ORTHO05D007208 3.1e-15 85.5 51 90.2
Hma1.2p1_0350F.1_g132650 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 5.4e-15 84.7 47 93.6
CDE09G0524 Ceratophyllum demersum HOM05D005749 ORTHO05D007208 2.6e-09 65.9 48 62.5
Dinv06973 Davidia involucrata HOM05D005749 ORTHO05D007208 2.6e-09 65.9 36 88.9
CBR_g41620 Chara braunii HOM05D005749 ORTHO05D007208 7.0e-07 57.8 58 48.3
Dinv07254 Davidia involucrata HOM05D005749 ORTHO05D007208 5.9e-06 54.7 27 96.3


User provided reference genes

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