Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc111.49 Carica papaya HOM05D004811 ORTHO05D006888 9.9e-222 773.1 377 100.0
QL02p036870 Quercus lobata HOM05D004811 ORTHO05D006888 2.5e-180 635.6 334 90.1
QL02p036407 Quercus lobata HOM05D004811 ORTHO05D006888 3.2e-180 635.2 334 89.8
Manes.14G160925 Manihot esculenta HOM05D004811 ORTHO05D006888 8.0e-179 630.6 334 90.1
CSS0026504 Camellia sinensis var. sinensis HOM05D004811 ORTHO05D006888 2.6e-177 625.5 334 88.0
CiPaw.16G007200 Carya illinoinensis HOM05D004811 ORTHO05D006888 5.7e-177 624.4 334 88.3
TWI18G0824 Tripterygium wilfordii HOM05D004811 ORTHO05D006888 5.7e-177 624.4 334 87.4
Cfa018260 Carpinus fangiana HOM05D004811 ORTHO05D006888 1.3e-176 623.2 334 88.0
Phvul.004G051000 Phaseolus vulgaris HOM05D004811 ORTHO05D006888 1.7e-176 622.9 334 87.1
arahy.Tifrunner.gnm1.ann1.21VBB5 Arachis hypogaea HOM05D004811 ORTHO05D006888 3.1e-175 618.6 334 86.5
arahy.Tifrunner.gnm1.ann1.BVJW9Q Arachis hypogaea HOM05D004811 ORTHO05D006888 3.1e-175 618.6 334 86.5
VMungo0464G0703 Vigna mungo HOM05D004811 ORTHO05D006888 3.1e-175 618.6 334 86.5
Ca_04451_v3 Cicer arietinum L. HOM05D004811 ORTHO05D006888 4.1e-175 618.2 334 87.1
Dinv04542 Davidia involucrata HOM05D004811 ORTHO05D006888 9.1e-175 617.1 334 87.7
TAR636G1158 Trochodendron aralioides HOM05D004811 ORTHO05D006888 1.2e-174 616.7 334 87.4
Atru.chr1.2074 Acer truncatum HOM05D004811 ORTHO05D006888 3.5e-174 615.1 334 86.2
Glyma.19G064500 Glycine max HOM05D004811 ORTHO05D006888 7.7e-174 614.0 334 85.6
MD09G1000100 Malus domestica HOM05D004811 ORTHO05D006888 7.7e-174 614.0 334 85.9
GSVIVG01032296001 Vitis vinifera HOM05D004811 ORTHO05D006888 7.7e-174 614.0 334 86.8
Rhsim11G0174100 Rhododendron simsii HOM05D004811 ORTHO05D006888 1.3e-173 613.2 334 85.6
RcHm_v2.0_Chr7g0218051 Rosa chinensis HOM05D004811 ORTHO05D006888 1.3e-173 613.2 334 87.4
Potri.003G106200 Populus trichocarpa HOM05D004811 ORTHO05D006888 1.7e-173 612.8 334 87.4
Prupe.1G353000 Prunus persica HOM05D004811 ORTHO05D006888 2.2e-173 612.5 334 86.8
Duzib106G1219 Durio zibethinus HOM05D004811 ORTHO05D006888 3.8e-173 611.7 334 86.8
PSO339G3970 Papaver somniferum HOM05D004811 ORTHO05D006888 4.2e-172 608.2 334 85.3
FvH4_5g27050 Fragaria vesca HOM05D004811 ORTHO05D006888 7.2e-172 607.4 334 86.2
MBI19_g06604_MAGBIO Magnolia biondii HOM05D004811 ORTHO05D006888 7.2e-172 607.4 334 85.0
Nn4g25146 Nelumbo nucifera HOM05D004811 ORTHO05D006888 1.2e-171 606.7 334 86.2
Thecc.10G126600 Theobroma cacao HOM05D004811 ORTHO05D006888 2.1e-171 605.9 334 85.9
Lj2g0018835 Lotus japonicus HOM05D004811 ORTHO05D006888 2.7e-171 605.5 343 82.8
Ciclev10011123m.g Citrus clementina HOM05D004811 ORTHO05D006888 3.6e-171 605.1 334 85.3
COL.COLO4_04346 Corchorus olitorius HOM05D004811 ORTHO05D006888 3.6e-171 605.1 334 86.5
PSO384G3007 Papaver somniferum HOM05D004811 ORTHO05D006888 6.1e-171 604.4 334 84.4
Psat1g085480 Pisum sativum HOM05D004811 ORTHO05D006888 6.1e-171 604.4 334 84.4
ClCG04G004820 Citrullus lanatus HOM05D004811 ORTHO05D006888 8.0e-171 604.0 334 86.5
Lalb_Chr06g0174221 Lupinus albus HOM05D004811 ORTHO05D006888 1.8e-170 602.8 334 85.9
Solyc10g050540.2 Solanum lycopersicum HOM05D004811 ORTHO05D006888 5.2e-170 601.3 334 83.5
Sopen10g022210 Solanum pennellii HOM05D004811 ORTHO05D006888 5.2e-170 601.3 334 83.5
Ah.02g115100 Amaranthus hybridus HOM05D004811 ORTHO05D006888 1.2e-169 600.1 334 83.5
CsaV3_4G031660 Cucumis sativus L. HOM05D004811 ORTHO05D006888 1.2e-169 600.1 334 85.6
FAN18G4560 Fragaria x ananassa HOM05D004811 ORTHO05D006888 5.7e-169 597.8 332 85.5
Medtr6g026900 Medicago truncatula HOM05D004811 ORTHO05D006888 9.8e-169 597.0 334 83.5
Oeu013671.1 Olea europaea HOM05D004811 ORTHO05D006888 1.7e-168 596.3 334 83.8
Lj5C205G23 Lonicera japonica HOM05D004811 ORTHO05D006888 2.8e-168 595.5 357 81.0
Cc02_g18400 Coffea canephora HOM05D004811 ORTHO05D006888 3.7e-168 595.1 334 83.2
Gorai.N006700 Gossypium raimondii HOM05D004811 ORTHO05D006888 8.3e-168 594.0 334 84.4
vmacro10447 Vaccinium macrocarpon HOM05D004811 ORTHO05D006888 1.8e-167 592.8 333 83.5
Sed0008285 Sechium edule HOM05D004811 ORTHO05D006888 3.1e-167 592.0 334 83.5
MSTRG.5372 Avicennia marina HOM05D004811 ORTHO05D006888 7.0e-167 590.9 334 81.7
Gohir.D06G178500 Gossypium hirsutum HOM05D004811 ORTHO05D006888 1.2e-166 590.1 334 84.1
THA.LOC104812205 Tarenaya hassleriana HOM05D004811 ORTHO05D006888 2.7e-166 589.0 334 83.5
ECA240G1163 Erigeron canadensis HOM05D004811 ORTHO05D006888 1.7e-165 586.3 334 82.3
vmacro02132 Vaccinium macrocarpon HOM05D004811 ORTHO05D006888 2.2e-165 585.9 346 80.3
Migut.N01206 Erythranthe guttata HOM05D004811 ORTHO05D006888 6.5e-165 584.3 335 81.5
ATR0307G027 Amborella trichopoda HOM05D004811 ORTHO05D006888 8.5e-165 583.9 334 82.9
PGR044G1247 Punica granatum HOM05D004811 ORTHO05D006888 8.5e-165 583.9 334 82.0
FAN04G3268 Fragaria x ananassa HOM05D004811 ORTHO05D006888 2.5e-164 582.4 353 80.7
FAN13G1880 Fragaria x ananassa HOM05D004811 ORTHO05D006888 5.5e-164 581.3 324 85.8
Eucgr.K03557 Eucalyptus grandis HOM05D004811 ORTHO05D006888 9.4e-164 580.5 334 80.8
Os12g0571900 Oryza sativa ssp. japonica HOM05D004811 ORTHO05D006888 6.8e-162 574.3 334 78.7
HanXRQChr03g0072161 Helianthus annuus HOM05D004811 ORTHO05D006888 1.2e-161 573.5 334 80.5
FAN08G1445 Fragaria x ananassa HOM05D004811 ORTHO05D006888 4.4e-161 571.6 367 77.7
Lsat_1_v5_gn_9_108940 Lactuca sativa HOM05D004811 ORTHO05D006888 1.7e-160 569.7 334 81.1
MELO3C008873.2 Cucumis melo HOM05D004811 ORTHO05D006888 5.4e-159 564.7 334 81.7
Sp1g15840 Schrenkiella parvula HOM05D004811 ORTHO05D006888 7.0e-159 564.3 335 79.4
PSO210G4088 Papaver somniferum HOM05D004811 ORTHO05D006888 1.2e-158 563.5 334 79.0
PSO210G5098 Papaver somniferum HOM05D004811 ORTHO05D006888 4.5e-158 561.6 334 78.1
Thhalv10006915m.g Eutrema salsugineum HOM05D004811 ORTHO05D006888 1.3e-157 560.1 334 77.8
A08p30750 Brassica napus HOM05D004811 ORTHO05D006888 2.3e-157 559.3 335 77.9
C08p18170 Brassica napus HOM05D004811 ORTHO05D006888 5.0e-157 558.1 335 77.6
BolC8t49451H Brassica oleracea HOM05D004811 ORTHO05D006888 5.0e-157 558.1 335 77.6
AL1G30120 Arabidopsis lyrata HOM05D004811 ORTHO05D006888 6.6e-157 557.8 335 77.3
Aqoxy1G00017 Aquilegia oxysepala HOM05D004811 ORTHO05D006888 1.5e-156 556.6 334 79.3
Carub.0001s1749 Capsella rubella HOM05D004811 ORTHO05D006888 1.5e-156 556.6 334 78.4
Gohir.A06G170700 Gossypium hirsutum HOM05D004811 ORTHO05D006888 7.2e-156 554.3 334 78.7
AT1G17760 Arabidopsis thaliana HOM05D004811 ORTHO05D006888 1.6e-155 553.1 334 76.6
EL10Ac5g11622 Beta vulgaris HOM05D004811 ORTHO05D006888 2.8e-155 552.4 334 79.6
PSO210G7430 Papaver somniferum HOM05D004811 ORTHO05D006888 3.6e-155 552.0 334 77.5
BraA08t35006Z Brassica rapa HOM05D004811 ORTHO05D006888 8.9e-154 547.4 359 72.7
Aa31LG10G8540 Aethionema arabicum HOM05D004811 ORTHO05D006888 1.2e-153 547.0 334 77.8
CARHR018370 Cardamine hirsuta HOM05D004811 ORTHO05D006888 1.2e-153 547.0 334 76.3
Peaxi162Scf00003g01938 Petunia axillaris HOM05D004811 ORTHO05D006888 3.7e-152 542.0 334 77.8
BcaC07g38890 Brassica carinata HOM05D004811 ORTHO05D006888 2.4e-151 539.3 335 75.5
Sabra03G0073000 Salix brachista HOM05D004811 ORTHO05D006888 2.1e-147 526.2 413 65.9
Sc16g0003300 Simmondsia chinensis HOM05D004811 ORTHO05D006888 7.5e-145 517.7 342 74.3
Mapoly0001s0525 Marchantia polymorpha HOM05D004811 ORTHO05D006888 1.7e-141 506.5 335 68.4
Nitab4.5_0000876g0200 Nicotiana tabacum HOM05D004811 ORTHO05D006888 5.6e-140 501.5 348 71.3
Pp3c3_19050 Physcomitrium patens HOM05D004811 ORTHO05D006888 3.6e-139 498.8 335 68.7
Haze_17837 Corylus avellana HOM05D004811 ORTHO05D006888 4.7e-139 498.4 334 74.6
Haze_17831 Corylus avellana HOM05D004811 ORTHO05D006888 1.8e-138 496.5 334 74.3
CDE09G0881 Ceratophyllum demersum HOM05D004811 ORTHO05D006888 6.8e-138 494.6 334 71.0
SGA_v2.0_scaffold55G19835 Striga asiatica HOM05D004811 ORTHO05D006888 6.8e-138 494.6 365 66.6
CBR_g19801 Chara braunii HOM05D004811 ORTHO05D006888 1.9e-132 476.5 337 65.9
AUR62036481 Chenopodium quinoa HOM05D004811 ORTHO05D006888 1.1e-130 470.7 332 69.6
AagrBONN_evm.TU.Sc2ySwM_362.2211 Anthoceros agrestis HOM05D004811 ORTHO05D006888 1.8e-130 469.9 335 65.1
AUR62037093 Chenopodium quinoa HOM05D004811 ORTHO05D006888 1.7e-128 463.4 332 69.3
SMO356G0171 Selaginella moellendorffii HOM05D004811 ORTHO05D006888 9.2e-127 457.6 335 61.5
HPP92_012441 Vanilla planifolia HOM05D004811 ORTHO05D006888 4.6e-126 455.3 335 66.6
SEGI_25586 Sequoiadendron giganteum HOM05D004811 ORTHO05D006888 6.6e-125 451.4 335 65.1
RcHm_v2.0_Chr2g0146051 Rosa chinensis HOM05D004811 ORTHO05D006888 1.5e-121 440.3 334 62.6
FAN05G0989 Fragaria x ananassa HOM05D004811 ORTHO05D006888 9.3e-119 431.0 337 61.1
FvH4_6g34990 Fragaria vesca HOM05D004811 ORTHO05D006888 1.2e-118 430.6 340 60.3
DCAR_022066 Daucus carota HOM05D004811 ORTHO05D006888 2.1e-118 429.9 334 63.5
FAN14G1986 Fragaria x ananassa HOM05D004811 ORTHO05D006888 8.7e-117 424.5 340 59.4
FAN09G3976 Fragaria x ananassa HOM05D004811 ORTHO05D006888 2.5e-116 422.9 340 59.7
Psat2g043000 Pisum sativum HOM05D004811 ORTHO05D006888 7.9e-110 401.4 336 61.6
Actinidia00514 Actinidia chinensis HOM05D004811 ORTHO05D006888 4.0e-98 362.5 208 82.7
unitig_8.g3575 Utricularia gibba HOM05D004811 ORTHO05D006888 5.3e-90 335.5 332 53.3
CAN.G606.10 Capsicum annuum HOM05D004811 ORTHO05D006888 1.3e-88 330.9 182 84.6
HPP92_028180 Vanilla planifolia HOM05D004811 ORTHO05D006888 2.8e-83 313.2 266 59.8
PRCOL_00007255 Prasinoderma coloniale HOM05D004811 ORTHO05D006888 9.7e-68 261.5 345 40.9
Nitab4.5_0016907g0010 Nicotiana tabacum HOM05D004811 ORTHO05D006888 5.9e-65 252.3 143 83.9
MCO07G203 Micromonas commoda HOM05D004811 ORTHO05D006888 6.3e-59 232.3 367 36.5
Zm00001eb287160 Zea mays HOM05D004811 ORTHO05D006888 9.1e-58 228.4 135 79.3
Cre12.g506050 Chlamydomonas reinhardtii HOM05D004811 ORTHO05D006888 4.8e-51 206.1 383 33.2
Hund15153 Selenicereus undatus HOM05D004811 ORTHO05D006888 5.0e-48 196.1 111 82.0
CAN.G606.11 Capsicum annuum HOM05D004811 ORTHO05D006888 2.6e-44 183.7 110 78.2
Actinidia09194 Actinidia chinensis HOM05D004811 ORTHO05D006888 2.5e-39 167.2 108 77.8
Actinidia09197 Actinidia chinensis HOM05D004811 ORTHO05D006888 2.9e-27 127.1 126 51.6
Actinidia09195 Actinidia chinensis HOM05D004811 ORTHO05D006888 2.9e-19 100.5 55 80.0
Thhalv10029084m.g Eutrema salsugineum HOM05D004811 ORTHO05D006888 7.1e-18 95.9 66 69.7
Sed0006977 Sechium edule HOM05D004811 ORTHO05D006888 1.0e-16 92.0 57 75.4
Actinidia09206 Actinidia chinensis HOM05D004811 ORTHO05D009793 9.5e-15 85.5 153 38.6
HPP92_028179 Vanilla planifolia HOM05D004811 ORTHO05D006888 8.9e-13 79.0 44 81.8
PSO541G4576 Papaver somniferum HOM05D000002 ORTHO05D000001 1.3e-08 65.1 59 50.8
EL10Ac8g19790 Beta vulgaris HOM05D002279 ORTHO05D002644 4.7e-06 56.6 224 22.8


User provided reference genes

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