Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc111.48 Carica papaya HOM05D004811 ORTHO05D006888 2.7e-73 278.5 133 100.0
Ciclev10011123m.g Citrus clementina HOM05D004811 ORTHO05D006888 2.0e-36 156.0 96 78.1
Cfa018260 Carpinus fangiana HOM05D004811 ORTHO05D006888 1.3e-35 153.3 96 77.1
RcHm_v2.0_Chr7g0218051 Rosa chinensis HOM05D004811 ORTHO05D006888 3.8e-35 151.8 95 76.8
Haze_17831 Corylus avellana HOM05D004811 ORTHO05D006888 8.5e-35 150.6 96 76.0
Haze_17837 Corylus avellana HOM05D004811 ORTHO05D006888 8.5e-35 150.6 96 76.0
Atru.chr1.2074 Acer truncatum HOM05D004811 ORTHO05D006888 1.5e-34 149.8 96 76.0
Prupe.1G353000 Prunus persica HOM05D004811 ORTHO05D006888 3.2e-34 148.7 109 68.8
CSS0026504 Camellia sinensis var. sinensis HOM05D004811 ORTHO05D006888 4.2e-34 148.3 96 75.0
FAN04G3268 Fragaria x ananassa HOM05D004811 ORTHO05D006888 4.2e-34 148.3 102 72.5
CiPaw.16G007200 Carya illinoinensis HOM05D004811 ORTHO05D006888 5.5e-34 147.9 96 75.0
FvH4_5g27050 Fragaria vesca HOM05D004811 ORTHO05D006888 5.5e-34 147.9 102 72.5
Actinidia00514 Actinidia chinensis HOM05D004811 ORTHO05D006888 2.1e-33 146.0 94 73.4
Potri.003G106200 Populus trichocarpa HOM05D004811 ORTHO05D006888 2.1e-33 146.0 94 75.5
Dinv04542 Davidia involucrata HOM05D004811 ORTHO05D006888 3.6e-33 145.2 96 75.0
FAN08G1445 Fragaria x ananassa HOM05D004811 ORTHO05D006888 3.6e-33 145.2 95 73.7
vmacro10447 Vaccinium macrocarpon HOM05D004811 ORTHO05D006888 3.6e-33 145.2 111 66.7
TWI18G0824 Tripterygium wilfordii HOM05D004811 ORTHO05D006888 6.1e-33 144.4 104 72.1
TAR636G1158 Trochodendron aralioides HOM05D004811 ORTHO05D006888 8.0e-33 144.1 99 72.7
GSVIVG01032296001 Vitis vinifera HOM05D004811 ORTHO05D006888 1.0e-32 143.7 96 71.9
FAN13G1880 Fragaria x ananassa HOM05D004811 ORTHO05D006888 1.4e-32 143.3 103 71.8
Rhsim11G0174100 Rhododendron simsii HOM05D004811 ORTHO05D006888 1.8e-32 142.9 95 73.7
FAN18G4560 Fragaria x ananassa HOM05D004811 ORTHO05D006888 3.0e-32 142.1 102 70.6
MBI19_g06604_MAGBIO Magnolia biondii HOM05D004811 ORTHO05D006888 1.2e-31 140.2 100 71.0
Duzib106G1219 Durio zibethinus HOM05D004811 ORTHO05D006888 1.5e-31 139.8 95 71.6
Eucgr.K03557 Eucalyptus grandis HOM05D004811 ORTHO05D006888 1.5e-31 139.8 95 67.4
Lj5C205G23 Lonicera japonica HOM05D004811 ORTHO05D006888 1.5e-31 139.8 95 72.6
Peaxi162Scf00003g01938 Petunia axillaris HOM05D004811 ORTHO05D006888 2.0e-31 139.4 116 58.6
Cc02_g18400 Coffea canephora HOM05D004811 ORTHO05D006888 3.4e-31 138.7 96 70.8
PSO339G3970 Papaver somniferum HOM05D004811 ORTHO05D006888 5.7e-31 137.9 103 66.0
Nn4g25146 Nelumbo nucifera HOM05D004811 ORTHO05D006888 7.5e-31 137.5 100 71.0
Manes.14G160925 Manihot esculenta HOM05D004811 ORTHO05D006888 9.7e-31 137.1 94 70.2
DCAR_022066 Daucus carota HOM05D004811 ORTHO05D006888 1.7e-30 136.3 96 68.8
Nitab4.5_0000876g0200 Nicotiana tabacum HOM05D004811 ORTHO05D006888 1.7e-30 136.3 101 65.3
Ca_04451_v3 Cicer arietinum L. HOM05D004811 ORTHO05D006888 2.2e-30 136.0 96 69.8
Oeu013671.1 Olea europaea HOM05D004811 ORTHO05D006888 2.2e-30 136.0 96 67.7
Thecc.10G126600 Theobroma cacao HOM05D004811 ORTHO05D006888 2.2e-30 136.0 95 69.5
Sabra03G0073000 Salix brachista HOM05D004811 ORTHO05D006888 2.8e-30 135.6 94 71.3
Solyc10g050540.2 Solanum lycopersicum HOM05D004811 ORTHO05D006888 2.8e-30 135.6 101 66.3
Sopen10g022210 Solanum pennellii HOM05D004811 ORTHO05D006888 2.8e-30 135.6 101 66.3
ClCG04G004820 Citrullus lanatus HOM05D004811 ORTHO05D006888 3.7e-30 135.2 112 63.4
ATR0307G027 Amborella trichopoda HOM05D004811 ORTHO05D006888 4.8e-30 134.8 107 62.6
Nitab4.5_0016907g0010 Nicotiana tabacum HOM05D004811 ORTHO05D006888 8.3e-30 134.0 101 65.3
VMungo0464G0703 Vigna mungo HOM05D004811 ORTHO05D006888 1.1e-29 133.7 97 69.1
MELO3C008873.2 Cucumis melo HOM05D004811 ORTHO05D006888 1.4e-29 133.3 112 62.5
CsaV3_4G031660 Cucumis sativus L. HOM05D004811 ORTHO05D006888 1.8e-29 132.9 111 63.1
PSO384G3007 Papaver somniferum HOM05D004811 ORTHO05D006888 1.8e-29 132.9 105 64.8
Psat1g085480 Pisum sativum HOM05D004811 ORTHO05D006888 4.1e-29 131.7 96 65.6
PGR044G1247 Punica granatum HOM05D004811 ORTHO05D006888 4.1e-29 131.7 95 67.4
Sed0008285 Sechium edule HOM05D004811 ORTHO05D006888 4.1e-29 131.7 102 65.7
Glyma.19G064500 Glycine max HOM05D004811 ORTHO05D006888 5.3e-29 131.3 96 66.7
Phvul.004G051000 Phaseolus vulgaris HOM05D004811 ORTHO05D006888 5.3e-29 131.3 96 68.8
Gohir.A06G170700 Gossypium hirsutum HOM05D004811 ORTHO05D006888 4.5e-28 128.3 95 67.4
Gohir.D06G178500 Gossypium hirsutum HOM05D004811 ORTHO05D006888 5.9e-28 127.9 95 66.3
MSTRG.5372 Avicennia marina HOM05D004811 ORTHO05D006888 7.7e-28 127.5 96 61.5
COL.COLO4_04346 Corchorus olitorius HOM05D004811 ORTHO05D006888 7.7e-28 127.5 103 64.1
Aqoxy1G00017 Aquilegia oxysepala HOM05D004811 ORTHO05D006888 1.0e-27 127.1 112 62.5
Psat2g043000 Pisum sativum HOM05D004811 ORTHO05D006888 1.0e-27 127.1 93 64.5
Gorai.N006700 Gossypium raimondii HOM05D004811 ORTHO05D006888 1.7e-27 126.3 95 66.3
arahy.Tifrunner.gnm1.ann1.21VBB5 Arachis hypogaea HOM05D004811 ORTHO05D006888 2.9e-27 125.6 95 63.2
Lj2g0018835 Lotus japonicus HOM05D004811 ORTHO05D006888 2.9e-27 125.6 95 65.3
Sc16g0003300 Simmondsia chinensis HOM05D004811 ORTHO05D006888 2.9e-27 125.6 96 67.7
arahy.Tifrunner.gnm1.ann1.BVJW9Q Arachis hypogaea HOM05D004811 ORTHO05D006888 3.8e-27 125.2 95 63.2
ECA240G1163 Erigeron canadensis HOM05D004811 ORTHO05D006888 3.8e-27 125.2 94 68.1
HanXRQChr03g0072161 Helianthus annuus HOM05D004811 ORTHO05D006888 5.0e-27 124.8 102 61.8
Sed0024483 Sechium edule HOM05D004811 ORTHO05D006888 1.1e-26 123.6 95 66.3
Lalb_Chr06g0174221 Lupinus albus HOM05D004811 ORTHO05D006888 1.5e-26 123.2 94 66.0
Ah.02g115100 Amaranthus hybridus HOM05D004811 ORTHO05D006888 7.2e-26 120.9 90 66.7
Sp1g15840 Schrenkiella parvula HOM05D004811 ORTHO05D006888 7.2e-26 120.9 94 66.0
Medtr6g026900 Medicago truncatula HOM05D004811 ORTHO05D006888 1.6e-25 119.8 96 63.5
Migut.N01206 Erythranthe guttata HOM05D004811 ORTHO05D006888 2.3e-24 115.9 92 62.0
Zm00001eb287160 Zea mays HOM05D004811 ORTHO05D006888 2.3e-24 115.9 98 59.2
Carub.0001s1749 Capsella rubella HOM05D004811 ORTHO05D006888 4.0e-24 115.2 94 63.8
THA.LOC104812205 Tarenaya hassleriana HOM05D004811 ORTHO05D006888 5.2e-24 114.8 95 64.2
AL1G30120 Arabidopsis lyrata HOM05D004811 ORTHO05D006888 8.8e-24 114.0 94 63.8
SEGI_25586 Sequoiadendron giganteum HOM05D004811 ORTHO05D006888 8.8e-24 114.0 100 60.0
Thhalv10006915m.g Eutrema salsugineum HOM05D004811 ORTHO05D006888 3.4e-23 112.1 94 60.6
EL10Ac5g11622 Beta vulgaris HOM05D004811 ORTHO05D006888 5.7e-23 111.3 90 62.2
CAN.G606.9 Capsicum annuum HOM05D004811 ORTHO05D006888 5.7e-23 111.3 109 55.0
CARHR018370 Cardamine hirsuta HOM05D004811 ORTHO05D006888 7.5e-23 110.9 93 61.3
Aa31LG10G8540 Aethionema arabicum HOM05D004811 ORTHO05D006888 9.8e-23 110.5 94 62.8
Lsat_1_v5_gn_9_108940 Lactuca sativa HOM05D004811 ORTHO05D006888 1.3e-22 110.2 98 60.2
BcaC07g38890 Brassica carinata HOM05D004811 ORTHO05D006888 1.7e-22 109.8 96 58.3
A08p30750 Brassica napus HOM05D004811 ORTHO05D006888 8.3e-22 107.5 96 60.4
BraA08t35006Z Brassica rapa HOM05D004811 ORTHO05D006888 8.3e-22 107.5 96 60.4
AUR62036481 Chenopodium quinoa HOM05D004811 ORTHO05D006888 8.3e-22 107.5 94 56.4
AT1G17760 Arabidopsis thaliana HOM05D004811 ORTHO05D006888 1.8e-21 106.3 94 60.6
AUR62037093 Chenopodium quinoa HOM05D004811 ORTHO05D006888 1.8e-21 106.3 90 57.8
C08p18170 Brassica napus HOM05D004811 ORTHO05D006888 2.4e-21 105.9 96 57.3
BolC8t49451H Brassica oleracea HOM05D004811 ORTHO05D006888 2.4e-21 105.9 96 57.3
CDE09G0881 Ceratophyllum demersum HOM05D004811 ORTHO05D006888 7.0e-21 104.4 97 61.9
HPP92_028179 Vanilla planifolia HOM05D004811 ORTHO05D006888 9.1e-21 104.0 95 56.8
HPP92_012441 Vanilla planifolia HOM05D004811 ORTHO05D006888 3.5e-20 102.1 94 56.4
SGA_v2.0_scaffold55G19835 Striga asiatica HOM05D004811 ORTHO05D006888 3.3e-18 95.5 79 60.8
Mapoly0001s0525 Marchantia polymorpha HOM05D004811 ORTHO05D006888 2.1e-17 92.8 108 48.1
Os12g0571900 Oryza sativa ssp. japonica HOM05D004811 ORTHO05D006888 2.8e-17 92.4 96 50.0
AagrBONN_evm.TU.Sc2ySwM_362.2211 Anthoceros agrestis HOM05D004811 ORTHO05D006888 1.2e-15 87.0 102 46.1
PSO210G4088 Papaver somniferum HOM05D004811 ORTHO05D006888 1.3e-14 83.6 83 54.2
PSO210G5098 Papaver somniferum HOM05D004811 ORTHO05D006888 1.3e-14 83.6 93 52.7
PSO210G7430 Papaver somniferum HOM05D004811 ORTHO05D006888 4.9e-14 81.6 92 48.9
QL02p036387 Quercus lobata HOM05D004811 ORTHO05D006888 6.3e-14 81.3 57 66.7
QL02p036851 Quercus lobata HOM05D004811 ORTHO05D006888 1.4e-13 80.1 57 64.9
RcHm_v2.0_Chr2g0146051 Rosa chinensis HOM05D004811 ORTHO05D006888 2.4e-13 79.3 88 54.5
unitig_8.g3575 Utricularia gibba HOM05D004811 ORTHO05D006888 7.0e-13 77.8 97 46.4
FvH4_6g34990 Fragaria vesca HOM05D004811 ORTHO05D006888 9.2e-13 77.4 96 46.9
FAN14G1986 Fragaria x ananassa HOM05D004811 ORTHO05D006888 9.2e-13 77.4 96 46.9
Pp3c3_19050 Physcomitrium patens HOM05D004811 ORTHO05D006888 1.2e-12 77.0 109 39.4
vmacro02132 Vaccinium macrocarpon HOM05D004811 ORTHO05D006888 1.2e-12 77.0 58 62.1
FAN05G0989 Fragaria x ananassa HOM05D004811 ORTHO05D006888 1.6e-12 76.6 98 45.9
FAN09G3976 Fragaria x ananassa HOM05D004811 ORTHO05D006888 2.0e-12 76.3 97 47.4
QL02p036870 Quercus lobata HOM05D004811 ORTHO05D006888 4.5e-12 75.1 43 81.4
QL02p036407 Quercus lobata HOM05D004811 ORTHO05D006888 1.0e-11 73.9 39 87.2
MD09G1000100 Malus domestica HOM05D004811 ORTHO05D006888 1.3e-11 73.6 39 87.2
Sed0006977 Sechium edule HOM05D004811 ORTHO05D006888 2.9e-11 72.4 48 70.8
SMO356G0171 Selaginella moellendorffii HOM05D004811 ORTHO05D006888 7.3e-10 67.8 89 39.3
Gohir.A02G097201 Gossypium hirsutum HOM05D004811 ORTHO05D006888 4.7e-09 65.1 57 57.9
Gohir.D01G069250 Gossypium hirsutum HOM05D004811 ORTHO05D006888 1.4e-08 63.5 58 56.9
CBR_g19801 Chara braunii HOM05D004811 ORTHO05D006888 3.7e-06 55.5 104 33.7


User provided reference genes

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