Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc111.45 Carica papaya HOM05D004811 ORTHO05D006888 3.6e-84 315.1 183 100.0
Atru.chr1.2074 Acer truncatum HOM05D004811 ORTHO05D006888 1.7e-54 216.5 182 67.0
Haze_17831 Corylus avellana HOM05D004811 ORTHO05D006888 5.6e-53 211.5 189 66.1
Haze_17837 Corylus avellana HOM05D004811 ORTHO05D006888 5.6e-53 211.5 189 66.1
QL02p036387 Quercus lobata HOM05D004811 ORTHO05D006888 3.6e-52 208.8 174 67.2
QL02p036851 Quercus lobata HOM05D004811 ORTHO05D006888 4.7e-52 208.4 174 67.2
Thecc.10G126600 Theobroma cacao HOM05D004811 ORTHO05D006888 8.1e-52 207.6 181 65.7
Cfa018260 Carpinus fangiana HOM05D004811 ORTHO05D006888 1.8e-51 206.5 189 65.1
Duzib106G1219 Durio zibethinus HOM05D004811 ORTHO05D006888 2.0e-50 203.0 196 60.2
CiPaw.16G007200 Carya illinoinensis HOM05D004811 ORTHO05D006888 9.9e-50 200.7 190 62.1
TAR636G1158 Trochodendron aralioides HOM05D004811 ORTHO05D006888 1.3e-49 200.3 185 64.3
TWI18G0824 Tripterygium wilfordii HOM05D004811 ORTHO05D006888 3.8e-49 198.7 184 63.6
Dinv04542 Davidia involucrata HOM05D004811 ORTHO05D006888 6.4e-49 198.0 179 62.6
COL.COLO4_04346 Corchorus olitorius HOM05D004811 ORTHO05D006888 8.4e-49 197.6 182 63.2
GSVIVG01032296001 Vitis vinifera HOM05D004811 ORTHO05D006888 1.6e-47 193.4 182 61.0
Manes.14G160925 Manihot esculenta HOM05D004811 ORTHO05D006888 7.8e-47 191.0 181 61.9
Actinidia00514 Actinidia chinensis HOM05D004811 ORTHO05D006888 1.0e-46 190.7 178 59.6
Eucgr.K03557 Eucalyptus grandis HOM05D004811 ORTHO05D006888 5.6e-45 184.9 182 62.1
Gohir.A06G170700 Gossypium hirsutum HOM05D004811 ORTHO05D006888 5.6e-45 184.9 171 61.4
Lj2g0018835 Lotus japonicus HOM05D004811 ORTHO05D006888 5.6e-45 184.9 155 65.2
PGR044G1247 Punica granatum HOM05D004811 ORTHO05D006888 5.6e-45 184.9 181 59.7
CsaV3_4G031660 Cucumis sativus L. HOM05D004811 ORTHO05D006888 2.1e-44 183.0 181 58.0
Gohir.D06G178500 Gossypium hirsutum HOM05D004811 ORTHO05D006888 2.8e-44 182.6 171 61.4
Gorai.N006700 Gossypium raimondii HOM05D004811 ORTHO05D006888 2.8e-44 182.6 171 61.4
TPR.G39924 Trifolium pratense HOM05D004811 ORTHO05D006888 8.1e-44 181.0 155 65.2
Lj5C205G23 Lonicera japonica HOM05D004811 ORTHO05D006888 1.1e-43 180.6 176 60.8
Ciclev10011123m.g Citrus clementina HOM05D004811 ORTHO05D006888 2.4e-43 179.5 183 60.1
Prupe.1G353000 Prunus persica HOM05D004811 ORTHO05D006888 4.4e-42 175.3 181 59.1
Psat1g085480 Pisum sativum HOM05D004811 ORTHO05D006888 5.8e-42 174.9 160 61.2
Rhsim11G0174100 Rhododendron simsii HOM05D004811 ORTHO05D006888 9.9e-42 174.1 182 57.1
Sed0024483 Sechium edule HOM05D004811 ORTHO05D006888 9.9e-42 174.1 176 55.7
vmacro10447 Vaccinium macrocarpon HOM05D004811 ORTHO05D006888 9.9e-42 174.1 177 59.3
FvH4_5g27050 Fragaria vesca HOM05D004811 ORTHO05D006888 3.8e-41 172.2 185 58.9
FAN04G3268 Fragaria x ananassa HOM05D004811 ORTHO05D006888 3.8e-41 172.2 185 58.4
Sed0008285 Sechium edule HOM05D004811 ORTHO05D006888 6.4e-41 171.4 182 54.9
vmacro02132 Vaccinium macrocarpon HOM05D004811 ORTHO05D006888 6.4e-41 171.4 177 59.3
FAN08G1445 Fragaria x ananassa HOM05D004811 ORTHO05D006888 1.4e-40 170.2 179 58.7
FAN18G4560 Fragaria x ananassa HOM05D004811 ORTHO05D006888 1.4e-40 170.2 185 57.8
Phvul.004G051000 Phaseolus vulgaris HOM05D004811 ORTHO05D006888 1.4e-40 170.2 165 61.8
EL10Ac5g11622 Beta vulgaris HOM05D004811 ORTHO05D006888 1.9e-40 169.9 183 56.3
VMungo0464G0703 Vigna mungo HOM05D004811 ORTHO05D006888 1.9e-40 169.9 165 59.4
FAN13G1880 Fragaria x ananassa HOM05D004811 ORTHO05D006888 3.2e-40 169.1 185 58.4
Ca_04451_v3 Cicer arietinum L. HOM05D004811 ORTHO05D006888 4.2e-40 168.7 163 62.0
RcHm_v2.0_Chr7g0218051 Rosa chinensis HOM05D004811 ORTHO05D006888 7.1e-40 167.9 187 60.4
Aqoxy1G00017 Aquilegia oxysepala HOM05D004811 ORTHO05D006888 1.6e-39 166.8 184 53.8
Medtr6g026900 Medicago truncatula HOM05D004811 ORTHO05D006888 1.6e-39 166.8 155 62.6
Cc02_g18400 Coffea canephora HOM05D004811 ORTHO05D006888 2.1e-39 166.4 178 54.5
Lalb_Chr06g0174221 Lupinus albus HOM05D004811 ORTHO05D006888 4.6e-39 165.2 160 60.0
Sabra03G0073000 Salix brachista HOM05D004811 ORTHO05D006888 7.8e-39 164.5 184 56.5
THA.LOC104812205 Tarenaya hassleriana HOM05D004811 ORTHO05D006888 1.0e-38 164.1 174 57.5
DCAR_022066 Daucus carota HOM05D004811 ORTHO05D006888 1.7e-38 163.3 185 53.0
Nn4g25146 Nelumbo nucifera HOM05D004811 ORTHO05D006888 5.1e-38 161.8 181 55.2
Peaxi162Scf00003g01938 Petunia axillaris HOM05D004811 ORTHO05D006888 5.1e-38 161.8 184 51.6
Sc16g0003300 Simmondsia chinensis HOM05D004811 ORTHO05D006888 1.5e-37 160.2 180 54.4
arahy.Tifrunner.gnm1.ann1.BVJW9Q Arachis hypogaea HOM05D004811 ORTHO05D006888 1.9e-37 159.8 163 58.9
AUR62036481 Chenopodium quinoa HOM05D004811 ORTHO05D006888 1.9e-37 159.8 153 58.8
arahy.Tifrunner.gnm1.ann1.21VBB5 Arachis hypogaea HOM05D004811 ORTHO05D006888 2.5e-37 159.5 163 58.9
Nitab4.5_0016907g0010 Nicotiana tabacum HOM05D004811 ORTHO05D006888 3.3e-37 159.1 185 52.4
AT1G17760 Arabidopsis thaliana HOM05D004811 ORTHO05D006888 4.3e-37 158.7 176 55.7
Nitab4.5_0000876g0200 Nicotiana tabacum HOM05D004811 ORTHO05D006888 5.6e-37 158.3 186 52.7
Psat2g043000 Pisum sativum HOM05D004811 ORTHO05D006888 7.3e-37 157.9 172 53.5
Glyma.19G064500 Glycine max HOM05D004811 ORTHO05D006888 9.6e-37 157.5 168 57.7
MSTRG.5372 Avicennia marina HOM05D004811 ORTHO05D006888 1.3e-36 157.1 181 55.8
Ah.02g115100 Amaranthus hybridus HOM05D004811 ORTHO05D006888 2.8e-36 156.0 183 51.4
AL1G30120 Arabidopsis lyrata HOM05D004811 ORTHO05D006888 2.8e-36 156.0 176 54.5
Carub.0001s1749 Capsella rubella HOM05D004811 ORTHO05D006888 4.8e-36 155.2 183 53.0
CSS0026504 Camellia sinensis var. sinensis HOM05D004811 ORTHO05D006888 8.1e-36 154.5 155 56.8
C08p18170 Brassica napus HOM05D004811 ORTHO05D006888 3.1e-35 152.5 176 52.8
BolC8t49451H Brassica oleracea HOM05D004811 ORTHO05D006888 3.1e-35 152.5 176 52.8
Sopen10g022210 Solanum pennellii HOM05D004811 ORTHO05D006888 3.1e-35 152.5 187 51.3
ClCG04G004820 Citrullus lanatus HOM05D004811 ORTHO05D006888 4.0e-35 152.1 131 65.6
A08p30750 Brassica napus HOM05D004811 ORTHO05D006888 5.3e-35 151.8 176 52.8
BraA08t35006Z Brassica rapa HOM05D004811 ORTHO05D006888 5.3e-35 151.8 176 52.8
MBI19_g06604_MAGBIO Magnolia biondii HOM05D004811 ORTHO05D006888 6.9e-35 151.4 184 53.3
Solyc10g050540.2 Solanum lycopersicum HOM05D004811 ORTHO05D006888 6.9e-35 151.4 187 51.3
Oeu013671.1 Olea europaea HOM05D004811 ORTHO05D006888 9.0e-35 151.0 179 54.7
Sp1g15840 Schrenkiella parvula HOM05D004811 ORTHO05D006888 9.0e-35 151.0 176 51.7
PSO339G3970 Papaver somniferum HOM05D004811 ORTHO05D006888 1.2e-34 150.6 186 53.2
PSO384G3007 Papaver somniferum HOM05D004811 ORTHO05D006888 3.4e-34 149.1 186 53.2
AUR62037093 Chenopodium quinoa HOM05D004811 ORTHO05D006888 1.3e-33 147.1 193 48.7
Hund15156 Selenicereus undatus HOM05D004811 ORTHO05D006888 1.3e-33 147.1 151 58.9
Potri.003G106200 Populus trichocarpa HOM05D004811 ORTHO05D006888 1.7e-33 146.7 184 51.1
Aa31LG10G8540 Aethionema arabicum HOM05D004811 ORTHO05D006888 1.1e-32 144.1 183 50.8
CAN.G606.9 Capsicum annuum HOM05D004811 ORTHO05D006888 1.5e-29 133.7 225 42.7
unitig_8.g3575 Utricularia gibba HOM05D004811 ORTHO05D006888 5.6e-29 131.7 177 49.7
HPP92_012441 Vanilla planifolia HOM05D004811 ORTHO05D006888 5.6e-29 131.7 174 50.6
BcaC07g38890 Brassica carinata HOM05D004811 ORTHO05D006888 8.1e-28 127.9 148 50.0
CARHR018370 Cardamine hirsuta HOM05D004811 ORTHO05D006888 9.0e-27 124.4 179 48.0
Thhalv10006915m.g Eutrema salsugineum HOM05D004811 ORTHO05D006888 2.6e-26 122.9 176 51.7
PSO210G5098 Papaver somniferum HOM05D004811 ORTHO05D006888 4.9e-25 118.6 183 45.9
PSO210G7430 Papaver somniferum HOM05D004811 ORTHO05D006888 1.1e-24 117.5 185 44.9
ECA240G1163 Erigeron canadensis HOM05D004811 ORTHO05D006888 4.6e-23 112.1 189 43.4
Os12g0571900 Oryza sativa ssp. japonica HOM05D004811 ORTHO05D006888 7.9e-23 111.3 161 44.7
PSO210G4088 Papaver somniferum HOM05D004811 ORTHO05D006888 1.0e-22 110.9 186 44.6
HanXRQChr03g0072161 Helianthus annuus HOM05D004811 ORTHO05D006888 7.4e-21 104.8 168 44.6
SGA_v2.0_scaffold753G53552 Striga asiatica HOM05D004811 ORTHO05D006888 4.8e-20 102.1 129 51.9
Lsat_1_v5_gn_9_108940 Lactuca sativa HOM05D004811 ORTHO05D006888 6.9e-19 98.2 206 40.3
Zm00001eb287160 Zea mays HOM05D004811 ORTHO05D006888 1.4e-16 90.5 169 39.1
MELO3C008873.2 Cucumis melo HOM05D004811 ORTHO05D006888 4.2e-16 89.0 181 37.0
ATR0307G027 Amborella trichopoda HOM05D004811 ORTHO05D006888 7.1e-16 88.2 199 39.2
Migut.N01206 Erythranthe guttata HOM05D004811 ORTHO05D006888 1.8e-14 83.6 183 37.2
CDE09G0881 Ceratophyllum demersum HOM05D004811 ORTHO05D006888 2.5e-13 79.7 97 48.5
SEGI_25586 Sequoiadendron giganteum HOM05D004811 ORTHO05D006888 7.4e-13 78.2 156 35.9
Pp3c3_19050 Physcomitrium patens HOM05D004811 ORTHO05D006888 1.8e-11 73.6 176 38.1
SMO356G0171 Selaginella moellendorffii HOM05D004811 ORTHO05D006888 2.6e-10 69.7 175 32.0
FvH4_6g34990 Fragaria vesca HOM05D004811 ORTHO05D006888 1.2e-07 60.8 185 35.1
FAN09G3976 Fragaria x ananassa HOM05D004811 ORTHO05D006888 2.7e-07 59.7 177 34.5
FAN14G1986 Fragaria x ananassa HOM05D004811 ORTHO05D006888 7.9e-07 58.2 185 34.6
FAN05G0989 Fragaria x ananassa HOM05D004811 ORTHO05D006888 3.0e-06 56.2 177 33.3
Mapoly0001s0525 Marchantia polymorpha HOM05D004811 ORTHO05D006888 3.0e-06 56.2 181 29.8


User provided reference genes

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