Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1007.5 Carica papaya HOM05D007647 ORTHO05D009644 1.1e-73 280.0 150 100.0
Atru.chr11.1897 Acer truncatum HOM05D007647 ORTHO05D009644 6.4e-47 191.0 238 51.7
Thecc.02G354300 Theobroma cacao HOM05D007647 ORTHO05D009644 6.4e-47 191.0 234 52.1
GSVIVG01020063001 Vitis vinifera HOM05D007647 ORTHO05D009644 8.4e-47 190.7 236 52.5
COL.COLO4_23043 Corchorus olitorius HOM05D007647 ORTHO05D009644 1.2e-45 186.8 237 51.5
Duzib268G0594 Durio zibethinus HOM05D007647 ORTHO05D009644 1.2e-45 186.8 236 51.3
TAR629G2072 Trochodendron aralioides HOM05D007647 ORTHO05D009644 3.5e-45 185.3 236 49.6
Haze_12054 Corylus avellana HOM05D007647 ORTHO05D009644 1.7e-44 183.0 242 50.8
Prupe.1G269000 Prunus persica HOM05D007647 ORTHO05D009644 1.7e-44 183.0 109 89.9
CANSAT56G1214 Cannabis sativa HOM05D007647 ORTHO05D009644 2.3e-44 182.6 234 50.9
MD13G1078100 Malus domestica HOM05D007647 ORTHO05D009644 2.3e-44 182.6 235 50.6
Manes.01G189400 Manihot esculenta HOM05D007647 ORTHO05D009644 2.3e-44 182.6 109 89.0
Ciclev10031710m.g Citrus clementina HOM05D007647 ORTHO05D009644 5.1e-44 181.4 236 50.0
MELO3C002903.2 Cucumis melo HOM05D007647 ORTHO05D009644 1.9e-43 179.5 234 47.9
RcHm_v2.0_Chr4g0440521 Rosa chinensis HOM05D007647 ORTHO05D009644 1.9e-43 179.5 238 49.6
Sed0021599 Sechium edule HOM05D007647 ORTHO05D009644 1.9e-43 179.5 110 87.3
CsaV3_5G025730 Cucumis sativus L. HOM05D007647 ORTHO05D009644 4.3e-43 178.3 234 47.9
Gohir.A13G071900 Gossypium hirsutum HOM05D007647 ORTHO05D009644 5.6e-43 177.9 225 52.4
ClCG09G020660 Citrullus lanatus HOM05D007647 ORTHO05D009644 7.3e-43 177.6 234 48.3
AL6G31770 Arabidopsis lyrata HOM05D007647 ORTHO05D009644 1.3e-42 176.8 237 48.5
Gorai.013G077500 Gossypium raimondii HOM05D007647 ORTHO05D009644 1.6e-42 176.4 109 87.2
Nn4g23062 Nelumbo nucifera HOM05D007647 ORTHO05D009644 1.6e-42 176.4 109 85.3
QL03p065502 Quercus lobata HOM05D007647 ORTHO05D009644 1.6e-42 176.4 110 86.4
FvH4_4g31851 Fragaria vesca HOM05D007647 ORTHO05D009644 2.1e-42 176.0 238 49.2
FAN07G2131 Fragaria x ananassa HOM05D007647 ORTHO05D009644 2.1e-42 176.0 239 49.0
Sabra10G0051000 Salix brachista HOM05D007647 ORTHO05D009644 2.1e-42 176.0 109 89.9
Cfa009023 Carpinus fangiana HOM05D007647 ORTHO05D009644 4.8e-42 174.9 113 83.2
FAN12G1599 Fragaria x ananassa HOM05D007647 ORTHO05D009644 8.1e-42 174.1 238 48.7
TWI36G1390 Tripterygium wilfordii HOM05D007647 ORTHO05D009644 1.1e-41 173.7 109 85.3
Actinidia08217 Actinidia chinensis HOM05D007647 ORTHO05D009644 1.4e-41 173.3 246 47.2
Potri.010G092600 Populus trichocarpa HOM05D007647 ORTHO05D009644 1.4e-41 173.3 109 88.1
Eucgr.L00644 Eucalyptus grandis HOM05D007647 ORTHO05D009644 1.8e-41 172.9 109 85.3
Eucgr.L01756 Eucalyptus grandis HOM05D007647 ORTHO05D009644 1.8e-41 172.9 109 85.3
CSS0041565 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 4.0e-41 171.8 109 83.5
CiPaw.06G081300 Carya illinoinensis HOM05D007647 ORTHO05D009644 4.0e-41 171.8 110 84.5
vmacro01233 Vaccinium macrocarpon HOM05D007647 ORTHO05D009644 5.3e-41 171.4 109 82.6
Aa31LG1G14410 Aethionema arabicum HOM05D007647 ORTHO05D009644 6.9e-41 171.0 234 46.6
AT5G20220 Arabidopsis thaliana HOM05D007647 ORTHO05D009644 6.9e-41 171.0 110 80.9
PSO591G0056 Papaver somniferum HOM05D007647 ORTHO05D009644 6.9e-41 171.0 109 80.7
Peaxi162Scf00209g00222 Petunia axillaris HOM05D007647 ORTHO05D009644 9.0e-41 170.6 109 83.5
CARHR192610 Cardamine hirsuta HOM05D007647 ORTHO05D009644 1.2e-40 170.2 110 80.9
Thhalv10013726m.g Eutrema salsugineum HOM05D007647 ORTHO05D009644 1.5e-40 169.9 110 80.9
PSO832G4528 Papaver somniferum HOM05D007647 ORTHO05D009644 1.5e-40 169.9 109 80.7
Gohir.D13G068000 Gossypium hirsutum HOM05D007647 ORTHO05D009644 2.6e-40 169.1 209 52.6
Nitab4.5_0010498g0040 Nicotiana tabacum HOM05D007647 ORTHO05D009644 4.5e-40 168.3 110 80.9
PGSC0003DMG400017644 Solanum tuberosum HOM05D007647 ORTHO05D009644 4.5e-40 168.3 110 80.9
PGR119G2388 Punica granatum HOM05D007647 ORTHO05D009644 5.8e-40 167.9 235 47.2
ECA234G4198 Erigeron canadensis HOM05D007647 ORTHO05D009644 7.6e-40 167.5 112 78.6
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 9.9e-40 167.2 236 47.5
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 9.9e-40 167.2 236 47.5
BolC9t58468H Brassica oleracea HOM05D007647 ORTHO05D009644 9.9e-40 167.2 236 47.5
Sc04g0008410 Simmondsia chinensis HOM05D007647 ORTHO05D009644 9.9e-40 167.2 235 46.4
Solyc05g007090.4 Solanum lycopersicum HOM05D007647 ORTHO05D009644 1.7e-39 166.4 110 80.0
EL10Ac7g17383 Beta vulgaris HOM05D007647 ORTHO05D009644 3.8e-39 165.2 109 81.7
BraA10t44047Z Brassica rapa HOM05D007647 ORTHO05D009644 3.8e-39 165.2 235 47.2
Ah.03g135420 Amaranthus hybridus HOM05D007647 ORTHO05D009644 8.4e-39 164.1 109 80.7
AUR62028827 Chenopodium quinoa HOM05D007647 ORTHO05D009644 1.1e-38 163.7 109 80.7
Sp6g24190 Schrenkiella parvula HOM05D007647 ORTHO05D009644 1.4e-38 163.3 110 79.1
CAN.G279.15 Capsicum annuum HOM05D007647 ORTHO05D009644 3.2e-38 162.2 110 78.2
Lj6A793T94 Lonicera japonica HOM05D007647 ORTHO05D009644 3.2e-38 162.2 109 80.7
Rhsim12G0058000 Rhododendron simsii HOM05D007647 ORTHO05D009644 3.2e-38 162.2 109 78.0
Aqoxy3G03286 Aquilegia oxysepala HOM05D007647 ORTHO05D009644 5.4e-38 161.4 109 76.1
VMungo0251G0888 Vigna mungo HOM05D007647 ORTHO05D009644 7.1e-38 161.0 109 78.9
AUR62005734 Chenopodium quinoa HOM05D007647 ORTHO05D009644 9.3e-38 160.6 109 79.8
Glyma.08G297100 Glycine max HOM05D007647 ORTHO05D009644 1.2e-37 160.2 233 46.4
Lalb_Chr05g0230251 Lupinus albus HOM05D007647 ORTHO05D009644 1.2e-37 160.2 109 78.9
MBI04_g10401_MAGBIO Magnolia biondii HOM05D007647 ORTHO05D009644 1.6e-37 159.8 109 77.1
SGA_v2.0_scaffold46G17448 Striga asiatica HOM05D007647 ORTHO05D009644 1.6e-37 159.8 109 77.1
Lj3g0001156 Lotus japonicus HOM05D007647 ORTHO05D009644 4.6e-37 158.3 109 77.1
Nitab4.5_0000879g0070 Nicotiana tabacum HOM05D007647 ORTHO05D009644 6.0e-37 157.9 106 80.2
HanXRQChr17g0570511 Helianthus annuus HOM05D007647 ORTHO05D009644 1.0e-36 157.1 109 77.1
Medtr8g468600 Medicago truncatula HOM05D007647 ORTHO05D009644 1.8e-36 156.4 232 44.0
Migut.L01334 Erythranthe guttata HOM05D007647 ORTHO05D009644 3.9e-36 155.2 109 75.2
HPP92_007641 Vanilla planifolia HOM05D007647 ORTHO05D009644 4.8e-34 148.3 110 71.8
ATR1120G132 Amborella trichopoda HOM05D007647 ORTHO05D009644 6.2e-34 147.9 110 75.5
Zm00001eb361470 Zea mays HOM05D007647 ORTHO05D009644 3.1e-33 145.6 113 69.9
Lsat_1_v5_gn_4_8860 Lactuca sativa HOM05D007647 ORTHO05D009644 2.0e-32 142.9 238 42.4
Carub.0006s1861 Capsella rubella HOM05D007647 ORTHO05D009644 7.6e-32 141.0 110 70.9
Hund05905 Selenicereus undatus HOM05D007647 ORTHO05D009644 4.9e-31 138.3 126 65.1
TPR.G33269 Trifolium pratense HOM05D007647 ORTHO05D009644 1.0e-28 130.6 209 42.6
SEGI_16248 Sequoiadendron giganteum HOM05D007647 ORTHO05D009644 1.9e-27 126.3 112 58.0
Cc11_g13400 Coffea canephora HOM05D007647 ORTHO05D009644 3.7e-26 122.1 79 81.0
CDE06G0855 Ceratophyllum demersum HOM05D007647 ORTHO05D009644 3.1e-25 119.0 87 73.6
SMO275G0007 Selaginella moellendorffii HOM05D007647 ORTHO05D009644 9.0e-17 90.9 119 46.2
CSS0017739 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 1.7e-15 86.7 53 84.9
Pp3c16_24380 Physcomitrium patens HOM05D007647 ORTHO05D009644 1.7e-15 86.7 110 46.4
Dinv24961 Davidia involucrata HOM05D007647 ORTHO05D009644 3.6e-13 79.0 172 34.9
arahy.Tifrunner.gnm1.ann1.RD16NV Arachis hypogaea HOM05D007647 ORTHO05D009644 3.9e-12 75.5 44 86.4
arahy.Tifrunner.gnm1.ann1.G93EFL Arachis hypogaea HOM05D007647 ORTHO05D009644 1.1e-11 73.9 44 84.1
Psat0s2221g0040 Pisum sativum HOM05D007647 ORTHO05D009644 1.1e-11 73.9 44 84.1
Phvul.003G068801 Phaseolus vulgaris HOM05D007647 ORTHO05D009644 5.7e-11 71.6 167 32.9
Sopen05g003060 Solanum pennellii HOM05D007647 ORTHO05D009644 2.8e-10 69.3 169 33.1
AagrBONN_evm.TU.Sc2ySwM_344.2050 Anthoceros agrestis HOM05D007647 ORTHO05D009644 9.1e-09 64.3 75 44.0


User provided reference genes

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