Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc10.171 Carica papaya HOM05D002927 ORTHO05D003841 5.4e-68 260.8 124 100.0
Duzib192G1045 Durio zibethinus HOM05D002927 ORTHO05D003841 3.1e-55 218.4 107 95.3
Cfa002048 Carpinus fangiana HOM05D002927 ORTHO05D003841 4.1e-55 218.0 106 96.2
CiPaw.01G240700 Carya illinoinensis HOM05D002927 ORTHO05D003841 4.1e-55 218.0 106 96.2
CiPaw.02G152400 Carya illinoinensis HOM05D002927 ORTHO05D003841 4.1e-55 218.0 106 96.2
Haze_16459 Corylus avellana HOM05D002927 ORTHO05D003841 4.1e-55 218.0 106 96.2
Gohir.D05G128300 Gossypium hirsutum HOM05D002927 ORTHO05D003841 6.9e-55 217.2 106 96.2
PGR102G2510 Punica granatum HOM05D002927 ORTHO05D003841 6.9e-55 217.2 106 94.3
Gohir.A10G078900 Gossypium hirsutum HOM05D002927 ORTHO05D003841 9.0e-55 216.9 106 95.3
Gohir.D10G072600 Gossypium hirsutum HOM05D002927 ORTHO05D003841 9.0e-55 216.9 106 95.3
Gorai.011G078200 Gossypium raimondii HOM05D002927 ORTHO05D003841 9.0e-55 216.9 106 95.3
TWI75G0487 Tripterygium wilfordii HOM05D002927 ORTHO05D003841 1.5e-54 216.1 106 94.3
Gohir.A05G127400 Gossypium hirsutum HOM05D002927 ORTHO05D003841 2.0e-54 215.7 106 95.3
COL.COLO4_30327 Corchorus olitorius HOM05D002927 ORTHO05D003841 2.6e-54 215.3 106 94.3
Duzib235G0335 Durio zibethinus HOM05D002927 ORTHO05D003841 2.6e-54 215.3 106 94.3
Manes.04G121200 Manihot esculenta HOM05D002927 ORTHO05D003841 2.6e-54 215.3 106 95.3
Potri.001G177700 Populus trichocarpa HOM05D002927 ORTHO05D003841 2.6e-54 215.3 106 95.3
Potri.001G178000 Populus trichocarpa HOM05D002927 ORTHO05D003841 2.6e-54 215.3 106 95.3
Eucgr.F03005 Eucalyptus grandis HOM05D002927 ORTHO05D003841 3.4e-54 214.9 106 93.4
Ciclev10024839m.g Citrus clementina HOM05D002927 ORTHO05D003841 5.8e-54 214.2 106 93.4
Prupe.3G074300 Prunus persica HOM05D002927 ORTHO05D003841 5.8e-54 214.2 106 94.3
Thecc.06G082500 Theobroma cacao HOM05D002927 ORTHO05D003841 5.8e-54 214.2 106 94.3
Glyma.07G034300 Glycine max HOM05D002927 ORTHO05D003841 7.6e-54 213.8 106 93.4
Manes.11G052000 Manihot esculenta HOM05D002927 ORTHO05D003841 7.6e-54 213.8 106 94.3
FvH4_6g30900 Fragaria vesca HOM05D002927 ORTHO05D003841 1.0e-53 213.4 106 93.4
FAN05G2514 Fragaria x ananassa HOM05D002927 ORTHO05D003841 1.0e-53 213.4 106 93.4
FAN09G4597 Fragaria x ananassa HOM05D002927 ORTHO05D003841 1.0e-53 213.4 106 93.4
FAN14G3898 Fragaria x ananassa HOM05D002927 ORTHO05D003841 1.0e-53 213.4 106 93.4
Gorai.009G132500 Gossypium raimondii HOM05D002927 ORTHO05D003841 1.0e-53 213.4 106 94.3
PSO063G0077 Papaver somniferum HOM05D002927 ORTHO05D003841 1.3e-53 213.0 106 92.5
PSO782G4571 Papaver somniferum HOM05D002927 ORTHO05D003841 1.3e-53 213.0 106 92.5
Potri.003G056700 Populus trichocarpa HOM05D002927 ORTHO05D003841 1.3e-53 213.0 106 94.3
VMungo0331G1773 Vigna mungo HOM05D002927 ORTHO05D003841 1.3e-53 213.0 106 92.5
ClCG09G002330 Citrullus lanatus HOM05D002927 ORTHO05D003841 1.7e-53 212.6 106 94.3
MELO3C023369.2 Cucumis melo HOM05D002927 ORTHO05D003841 1.7e-53 212.6 106 94.3
CsaV3_7G032990 Cucumis sativus L. HOM05D002927 ORTHO05D003841 1.7e-53 212.6 106 94.3
DCAR_016229 Daucus carota HOM05D002927 ORTHO05D003841 1.7e-53 212.6 106 90.6
Lj5C63T3 Lonicera japonica HOM05D002927 ORTHO05D003841 1.7e-53 212.6 106 93.4
GSVIVG01017154001 Vitis vinifera HOM05D002927 ORTHO05D003841 1.7e-53 212.6 106 93.4
CDE06G0582 Ceratophyllum demersum HOM05D002927 ORTHO05D003841 2.2e-53 212.2 106 92.5
Dinv38060 Davidia involucrata HOM05D002927 ORTHO05D003841 2.2e-53 212.2 106 93.4
FAN02G2217 Fragaria x ananassa HOM05D002927 ORTHO05D003841 2.2e-53 212.2 106 92.5
Atru.chr1.3222 Acer truncatum HOM05D002927 ORTHO05D003841 2.9e-53 211.8 106 93.4
arahy.Tifrunner.gnm1.ann1.QQR1AK Arachis hypogaea HOM05D002927 ORTHO05D003841 2.9e-53 211.8 106 93.4
Phvul.010G151600 Phaseolus vulgaris HOM05D002927 ORTHO05D003841 3.8e-53 211.5 106 91.5
SalBow2G0578 Salvia bowleyana HOM05D002927 ORTHO05D003841 3.8e-53 211.5 106 93.4
ECA232G1494 Erigeron canadensis HOM05D002927 ORTHO05D003841 5.0e-53 211.1 106 92.5
RcHm_v2.0_Chr2g0137391 Rosa chinensis HOM05D002927 ORTHO05D003841 5.0e-53 211.1 106 91.5
Sed0021699 Sechium edule HOM05D002927 ORTHO05D003841 5.0e-53 211.1 106 92.5
TWI12G0585 Tripterygium wilfordii HOM05D002927 ORTHO05D003841 5.0e-53 211.1 106 92.5
Aqoxy7G01853 Aquilegia oxysepala HOM05D002927 ORTHO05D003841 6.5e-53 210.7 106 90.6
Glyma.08G207800 Glycine max HOM05D002927 ORTHO05D003841 6.5e-53 210.7 106 92.5
Lj9C506T2 Lonicera japonica HOM05D002927 ORTHO05D003841 6.5e-53 210.7 106 91.5
MD17G1197900 Malus domestica HOM05D002927 ORTHO05D003841 6.5e-53 210.7 106 91.5
Sc12g0009020 Simmondsia chinensis HOM05D002927 ORTHO05D003841 6.5e-53 210.7 106 92.5
Sc12g0009150 Simmondsia chinensis HOM05D002927 ORTHO05D003841 6.5e-53 210.7 106 92.5
TAR624G0871 Trochodendron aralioides HOM05D002927 ORTHO05D003841 6.5e-53 210.7 106 92.5
Ca_20406_v3 Cicer arietinum L. HOM05D002927 ORTHO05D003841 8.4e-53 210.3 106 91.5
Nn8g39281 Nelumbo nucifera HOM05D002927 ORTHO05D003841 8.4e-53 210.3 106 91.5
THA.LOC104812472 Tarenaya hassleriana HOM05D002927 ORTHO05D003841 8.4e-53 210.3 106 90.6
CSS0017782 Camellia sinensis var. sinensis HOM05D002927 ORTHO05D003841 1.1e-52 209.9 106 91.5
Gohir.A02G122600 Gossypium hirsutum HOM05D002927 ORTHO05D003841 1.1e-52 209.9 106 92.5
Nn2g11837 Nelumbo nucifera HOM05D002927 ORTHO05D003841 1.1e-52 209.9 106 90.6
Os01g0617500 Oryza sativa ssp. japonica HOM05D002927 ORTHO05D003841 1.1e-52 209.9 106 91.5
Sed0022010 Sechium edule HOM05D002927 ORTHO05D003841 1.1e-52 209.9 106 92.5
Zm00001eb159790 Zea mays HOM05D002927 ORTHO05D003841 1.1e-52 209.9 106 91.5
Actinidia01792 Actinidia chinensis HOM05D002927 ORTHO05D003841 1.4e-52 209.5 106 91.5
Actinidia15825 Actinidia chinensis HOM05D002927 ORTHO05D003841 1.4e-52 209.5 106 91.5
Sabra01G0148600 Salix brachista HOM05D002927 ORTHO05D003841 1.4e-52 209.5 105 92.4
Sabra03G0032300 Salix brachista HOM05D002927 ORTHO05D003841 1.4e-52 209.5 106 91.5
Hma1.2p1_0682F.1_g202640 Hydrangea macrophylla HOM05D002927 ORTHO05D003841 1.9e-52 209.1 106 91.5
Hund06600 Selenicereus undatus HOM05D002927 ORTHO05D003841 1.9e-52 209.1 107 90.7
CAN.G438.51 Capsicum annuum HOM05D002927 ORTHO05D003841 3.2e-52 208.4 106 91.5
Gorai.002G058200 Gossypium raimondii HOM05D002927 ORTHO05D003841 3.2e-52 208.4 106 91.5
MD09G1215200 Malus domestica HOM05D002927 ORTHO05D003841 3.2e-52 208.4 106 89.6
TAR383G0846 Trochodendron aralioides HOM05D002927 ORTHO05D003841 3.2e-52 208.4 106 88.7
Ah.01g020990 Amaranthus hybridus HOM05D002927 ORTHO05D003841 5.5e-52 207.6 106 89.6
CANSAT56G4360 Cannabis sativa HOM05D002927 ORTHO05D003841 5.5e-52 207.6 106 89.6
CDE07G0468 Ceratophyllum demersum HOM05D002927 ORTHO05D003841 5.5e-52 207.6 106 90.6
Medtr4g011890 Medicago truncatula HOM05D002927 ORTHO05D003841 5.5e-52 207.6 106 89.6
vmacro18935 Vaccinium macrocarpon HOM05D002927 ORTHO05D003841 5.5e-52 207.6 106 90.6
AUR62011613 Chenopodium quinoa HOM05D002927 ORTHO05D003841 7.2e-52 207.2 106 90.6
AUR62016429 Chenopodium quinoa HOM05D002927 ORTHO05D003841 7.2e-52 207.2 106 90.6
ECA234G1721 Erigeron canadensis HOM05D002927 ORTHO05D003841 7.2e-52 207.2 106 88.7
Lsat_1_v5_gn_5_129901 Lactuca sativa HOM05D002927 ORTHO05D003841 7.2e-52 207.2 106 89.6
Oeu033496.1 Olea europaea HOM05D002927 ORTHO05D003841 7.2e-52 207.2 106 90.6
Rhsim08G0218500 Rhododendron simsii HOM05D002927 ORTHO05D003841 7.2e-52 207.2 106 90.6
MSTRG.11092 Avicennia marina HOM05D002927 ORTHO05D003841 9.3e-52 206.8 106 89.6
VMungo1080G1114 Vigna mungo HOM05D002927 ORTHO05D003841 9.3e-52 206.8 106 90.6
Phvul.005G172700 Phaseolus vulgaris HOM05D002927 ORTHO05D003841 1.2e-51 206.5 106 90.6
Solyc06g066790.3 Solanum lycopersicum HOM05D002927 ORTHO05D003841 1.2e-51 206.5 106 90.6
Lj3g0020255 Lotus japonicus HOM05D002927 ORTHO05D003841 1.6e-51 206.1 106 88.7
Solyc03g120350.3 Solanum lycopersicum HOM05D002927 ORTHO05D003841 1.6e-51 206.1 106 89.6
Sopen03g039240 Solanum pennellii HOM05D002927 ORTHO05D003841 1.6e-51 206.1 106 89.6
PGSC0003DMG400002639 Solanum tuberosum HOM05D002927 ORTHO05D003841 1.6e-51 206.1 106 89.6
TPR.G24164 Trifolium pratense HOM05D002927 ORTHO05D003841 2.1e-51 205.7 106 89.6
Glyma.13G360900 Glycine max HOM05D002927 ORTHO05D003841 2.7e-51 205.3 106 89.6
HanXRQChr10g0314931 Helianthus annuus HOM05D002927 ORTHO05D003841 2.7e-51 205.3 106 88.7
Nitab4.5_0003159g0060 Nicotiana tabacum HOM05D002927 ORTHO05D003841 2.7e-51 205.3 106 89.6
MSTRG.22704 Avicennia marina HOM05D002927 ORTHO05D003841 3.5e-51 204.9 106 90.6
ATR0037G015 Amborella trichopoda HOM05D002927 ORTHO05D003841 4.6e-51 204.5 106 87.7
Lalb_Chr25g0279601 Lupinus albus HOM05D002927 ORTHO05D003841 4.6e-51 204.5 106 89.6
Lalb_Chr14g0373541 Lupinus albus HOM05D002927 ORTHO05D003841 6.1e-51 204.1 106 90.6
Medtr2g102435 Medicago truncatula HOM05D002927 ORTHO05D003841 6.1e-51 204.1 106 89.6
Ca_01105_v3 Cicer arietinum L. HOM05D002927 ORTHO05D003841 7.9e-51 203.8 106 87.7
Cc04_g03600 Coffea canephora HOM05D002927 ORTHO05D003841 7.9e-51 203.8 106 88.7
Migut.I00844 Erythranthe guttata HOM05D002927 ORTHO05D003841 7.9e-51 203.8 106 88.7
HanXRQChr16g0501061 Helianthus annuus HOM05D002927 ORTHO05D003841 7.9e-51 203.8 106 87.7
Lj3g0010300 Lotus japonicus HOM05D002927 ORTHO05D003841 7.9e-51 203.8 106 88.7
Sopen06g025070 Solanum pennellii HOM05D002927 ORTHO05D003841 1.0e-50 203.4 106 89.6
arahy.Tifrunner.gnm1.ann1.A9FW4X Arachis hypogaea HOM05D002927 ORTHO05D003841 1.3e-50 203.0 106 92.5
Psat5g299320 Pisum sativum HOM05D002927 ORTHO05D003841 1.3e-50 203.0 106 88.7
Glyma.15G013000 Glycine max HOM05D002927 ORTHO05D003841 1.8e-50 202.6 106 87.7
Oeu063956.1 Olea europaea HOM05D002927 ORTHO05D003841 3.9e-50 201.4 106 88.7
Thhalv10018100m.g Eutrema salsugineum HOM05D002927 ORTHO05D003841 5.1e-50 201.1 106 87.7
Lsat_1_v5_gn_4_103500 Lactuca sativa HOM05D002927 ORTHO05D003841 6.7e-50 200.7 106 90.6
AL2G41090 Arabidopsis lyrata HOM05D002927 ORTHO05D003841 8.7e-50 200.3 106 87.7
AT1G80410 Arabidopsis thaliana HOM05D002927 ORTHO05D003841 8.7e-50 200.3 106 87.7
BolC6t40424H Brassica oleracea HOM05D002927 ORTHO05D003841 8.7e-50 200.3 106 87.7
Peaxi162Scf00207g00840 Petunia axillaris HOM05D002927 ORTHO05D003841 8.7e-50 200.3 106 90.6
THA.LOC104813572 Tarenaya hassleriana HOM05D002927 ORTHO05D003841 8.7e-50 200.3 106 86.8
Sp5g35400 Schrenkiella parvula HOM05D002927 ORTHO05D003841 1.5e-49 199.5 106 86.8
CARHR074830 Cardamine hirsuta HOM05D002927 ORTHO05D003841 1.9e-49 199.1 105 87.6
HanXRQChr14g0455941 Helianthus annuus HOM05D002927 ORTHO05D003841 1.9e-49 199.1 106 84.9
Carub.0002s2716 Capsella rubella HOM05D002927 ORTHO05D003841 2.5e-49 198.7 106 86.8
SEGI_16698 Sequoiadendron giganteum HOM05D002927 ORTHO05D003841 2.5e-49 198.7 106 86.8
A07p45260 Brassica napus HOM05D002927 ORTHO05D003841 3.3e-49 198.4 106 86.8
Psat7g253400 Pisum sativum HOM05D002927 ORTHO05D003841 3.3e-49 198.4 106 85.8
THA.LOC104808208 Tarenaya hassleriana HOM05D002927 ORTHO05D003841 3.3e-49 198.4 106 89.6
BcaB02g07275 Brassica carinata HOM05D002927 ORTHO05D003841 4.3e-49 198.0 106 85.8
BcaC08g45310 Brassica carinata HOM05D002927 ORTHO05D003841 4.3e-49 198.0 106 85.8
BcaC08g47587 Brassica carinata HOM05D002927 ORTHO05D003841 4.3e-49 198.0 106 86.8
A07p26660 Brassica napus HOM05D002927 ORTHO05D003841 4.3e-49 198.0 106 85.8
C06p29140 Brassica napus HOM05D002927 ORTHO05D003841 4.3e-49 198.0 106 85.8
C06p54110 Brassica napus HOM05D002927 ORTHO05D003841 4.3e-49 198.0 106 86.8
BolC6t38078H Brassica oleracea HOM05D002927 ORTHO05D003841 4.3e-49 198.0 106 85.8
BraA07t30309Z Brassica rapa HOM05D002927 ORTHO05D003841 4.3e-49 198.0 106 85.8
CAN.G395.20 Capsicum annuum HOM05D002927 ORTHO05D003841 4.3e-49 198.0 106 86.8
Lalb_Chr24g0395741 Lupinus albus HOM05D002927 ORTHO05D003841 4.3e-49 198.0 106 86.8
TPR.G37235 Trifolium pratense HOM05D002927 ORTHO05D003841 4.3e-49 198.0 106 86.8
EL10Ac9g21989 Beta vulgaris HOM05D002927 ORTHO05D003841 7.4e-49 197.2 106 88.7
Nitab4.5_0003885g0030 Nicotiana tabacum HOM05D002927 ORTHO05D003841 1.3e-48 196.4 106 88.7
Peaxi162Scf00015g00253 Petunia axillaris HOM05D002927 ORTHO05D003841 1.3e-48 196.4 106 89.6
BcaB05g25270 Brassica carinata HOM05D002927 ORTHO05D003841 1.6e-48 196.1 106 84.9
BraA07t32030Z Brassica rapa HOM05D002927 ORTHO05D003841 2.2e-48 195.7 106 85.8
Aa31LG4G680 Aethionema arabicum HOM05D002927 ORTHO05D003841 1.8e-47 192.6 106 86.8
BcaC03g15969 Brassica carinata HOM05D002927 ORTHO05D003841 9.0e-47 190.3 106 82.1
A02p23570 Brassica napus HOM05D002927 ORTHO05D003841 9.0e-47 190.3 106 82.1
C02p37340 Brassica napus HOM05D002927 ORTHO05D003841 9.0e-47 190.3 106 82.1
BraA02t07350Z Brassica rapa HOM05D002927 ORTHO05D003841 9.0e-47 190.3 106 82.1
SGA_v2.0_scaffold37G14805 Striga asiatica HOM05D002927 ORTHO05D003841 9.0e-47 190.3 106 87.7
Duzib063G0005 Durio zibethinus HOM05D002927 ORTHO05D003841 2.0e-46 189.1 106 83.0
SMO364G0531 Selaginella moellendorffii HOM05D002927 ORTHO05D003841 2.6e-46 188.7 106 81.1
unitig_21.g20350 Utricularia gibba HOM05D002927 ORTHO05D003841 4.5e-46 188.0 117 77.8
Duzib141G0004 Durio zibethinus HOM05D002927 ORTHO05D003841 1.3e-45 186.4 106 83.0
DCAR_021318 Daucus carota HOM05D002927 ORTHO05D003841 2.2e-45 185.7 106 83.0
Duzib063G0002 Durio zibethinus HOM05D002927 ORTHO05D003841 2.9e-45 185.3 106 81.1
Pp3c10_20750 Physcomitrium patens HOM05D002927 ORTHO05D003841 1.1e-44 183.3 106 78.3
AagrBONN_evm.TU.Sc2ySwM_228.5803 Anthoceros agrestis HOM05D002927 ORTHO05D003841 1.4e-44 183.0 106 78.3
Pp3c4_20560 Physcomitrium patens HOM05D002927 ORTHO05D003841 1.9e-44 182.6 106 77.4
CBR_g51323 Chara braunii HOM05D002927 ORTHO05D003841 7.2e-44 180.6 126 69.8
Pp3c3_24080 Physcomitrium patens HOM05D002927 ORTHO05D003841 4.6e-43 177.9 106 74.5
Mapoly0079s0051 Marchantia polymorpha HOM05D002927 ORTHO05D003841 3.0e-42 175.3 106 76.4
Duzib114G1026 Durio zibethinus HOM05D002927 ORTHO05D003841 4.1e-39 164.9 99 76.8
Hund00592 Selenicereus undatus HOM05D002927 ORTHO05D003841 3.9e-34 148.3 84 85.7
PRCOL_00006302 Prasinoderma coloniale HOM05D002927 ORTHO05D003841 4.8e-32 141.4 108 64.8
Duzib141G0006 Durio zibethinus HOM05D002927 ORTHO05D003841 7.0e-31 137.5 78 80.8
Duzib010G0002 Durio zibethinus HOM05D002927 ORTHO05D003841 6.5e-29 131.0 79 77.2
Cre06.g278225 Chlamydomonas reinhardtii HOM05D002927 ORTHO05D003841 7.2e-28 127.5 122 55.7
MCO04G539 Micromonas commoda HOM05D002927 ORTHO05D003841 6.1e-27 124.4 101 57.4
Dinv30530 Davidia involucrata HOM05D002927 ORTHO05D003841 7.5e-25 117.5 58 91.4
DCAR_029021 Daucus carota HOM05D002927 ORTHO05D003841 2.0e-22 109.4 109 49.5
Haze_26772 Corylus avellana HOM05D002927 ORTHO05D003841 8.5e-21 104.0 127 38.6
PSO724G0063 Papaver somniferum HOM05D002927 ORTHO05D003841 1.2e-17 93.6 91 50.5
Cfa026533 Carpinus fangiana HOM05D002927 ORTHO05D003841 3.4e-17 92.0 91 48.4
Psat1g029880 Pisum sativum HOM05D002927 ORTHO05D003841 9.4e-12 73.9 37 86.5
Nitab4.5_0000351g0230 Nicotiana tabacum HOM05D002927 ORTHO05D003841 3.7e-08 62.0 29 89.7
Nitab4.5_0002327g0070 Nicotiana tabacum HOM05D002927 ORTHO05D003841 5.4e-07 58.2 30 83.3
Dinv30531 Davidia involucrata HOM05D002927 ORTHO05D003841 1.6e-06 56.6 31 83.9


User provided reference genes

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