Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc10.169 Carica papaya HOM05D002927 ORTHO05D015040 2.1e-82 308.9 149 100.0
Nn8g39281 Nelumbo nucifera HOM05D002927 ORTHO05D003841 6.2e-50 201.1 143 67.8
Manes.04G121200 Manihot esculenta HOM05D002927 ORTHO05D003841 8.0e-50 200.7 144 68.8
Potri.003G056700 Populus trichocarpa HOM05D002927 ORTHO05D003841 8.0e-50 200.7 144 70.1
GSVIVG01017154001 Vitis vinifera HOM05D002927 ORTHO05D003841 1.1e-49 200.3 144 70.1
Prupe.3G074300 Prunus persica HOM05D002927 ORTHO05D003841 2.3e-49 199.1 127 71.7
Ciclev10024839m.g Citrus clementina HOM05D002927 ORTHO05D003841 5.2e-49 198.0 112 81.2
Lj3g0010300 Lotus japonicus HOM05D002927 ORTHO05D003841 6.8e-49 197.6 134 70.9
MD17G1197900 Malus domestica HOM05D002927 ORTHO05D003841 6.8e-49 197.6 144 66.7
Nn2g11837 Nelumbo nucifera HOM05D002927 ORTHO05D003841 6.8e-49 197.6 144 68.1
TAR383G0846 Trochodendron aralioides HOM05D002927 ORTHO05D003841 6.8e-49 197.6 127 74.0
CiPaw.01G240700 Carya illinoinensis HOM05D002927 ORTHO05D003841 8.9e-49 197.2 127 73.2
FAN14G3898 Fragaria x ananassa HOM05D002927 ORTHO05D003841 8.9e-49 197.2 144 66.7
Atru.chr1.3222 Acer truncatum HOM05D002927 ORTHO05D003841 2.6e-48 195.7 125 73.6
Manes.11G052000 Manihot esculenta HOM05D002927 ORTHO05D003841 2.6e-48 195.7 125 73.6
Glyma.15G013000 Glycine max HOM05D002927 ORTHO05D003841 3.4e-48 195.3 127 70.9
Gorai.011G078200 Gossypium raimondii HOM05D002927 ORTHO05D003841 3.4e-48 195.3 144 65.3
RcHm_v2.0_Chr2g0137391 Rosa chinensis HOM05D002927 ORTHO05D003841 3.4e-48 195.3 127 72.4
Sabra01G0148600 Salix brachista HOM05D002927 ORTHO05D003841 3.4e-48 195.3 144 70.8
HanXRQChr16g0501061 Helianthus annuus HOM05D002927 ORTHO05D003841 4.4e-48 194.9 133 70.7
Lj3g0020255 Lotus japonicus HOM05D002927 ORTHO05D003841 4.4e-48 194.9 127 70.9
arahy.Tifrunner.gnm1.ann1.A9FW4X Arachis hypogaea HOM05D002927 ORTHO05D003841 5.8e-48 194.5 127 72.4
PGR102G2510 Punica granatum HOM05D002927 ORTHO05D003841 5.8e-48 194.5 133 69.9
Gohir.A10G078900 Gossypium hirsutum HOM05D002927 ORTHO05D003841 7.5e-48 194.1 144 64.6
Gohir.D10G072600 Gossypium hirsutum HOM05D002927 ORTHO05D003841 7.5e-48 194.1 144 64.6
MD09G1215200 Malus domestica HOM05D002927 ORTHO05D003841 7.5e-48 194.1 144 66.7
COL.COLO4_30327 Corchorus olitorius HOM05D002927 ORTHO05D003841 9.8e-48 193.7 121 73.6
Hma1.2p1_0682F.1_g202640 Hydrangea macrophylla HOM05D002927 ORTHO05D003841 9.8e-48 193.7 144 67.4
Psat5g299320 Pisum sativum HOM05D002927 ORTHO05D003841 9.8e-48 193.7 127 71.7
Ca_01105_v3 Cicer arietinum L. HOM05D002927 ORTHO05D003841 1.3e-47 193.4 128 71.1
FAN05G2514 Fragaria x ananassa HOM05D002927 ORTHO05D003841 1.3e-47 193.4 144 65.3
arahy.Tifrunner.gnm1.ann1.QQR1AK Arachis hypogaea HOM05D002927 ORTHO05D003841 1.7e-47 193.0 127 71.7
Lsat_1_v5_gn_4_103500 Lactuca sativa HOM05D002927 ORTHO05D003841 1.7e-47 193.0 133 69.9
Lsat_1_v5_gn_5_129901 Lactuca sativa HOM05D002927 ORTHO05D003841 1.7e-47 193.0 144 66.7
Haze_16459 Corylus avellana HOM05D002927 ORTHO05D003841 2.2e-47 192.6 127 72.4
FvH4_6g30900 Fragaria vesca HOM05D002927 ORTHO05D003841 2.2e-47 192.6 144 65.3
FAN02G2217 Fragaria x ananassa HOM05D002927 ORTHO05D003841 2.2e-47 192.6 144 65.3
FAN09G4597 Fragaria x ananassa HOM05D002927 ORTHO05D003841 2.2e-47 192.6 144 65.3
Lalb_Chr25g0279601 Lupinus albus HOM05D002927 ORTHO05D003841 2.9e-47 192.2 144 65.3
Potri.001G178000 Populus trichocarpa HOM05D002927 ORTHO05D003841 2.9e-47 192.2 144 68.8
Thecc.06G082500 Theobroma cacao HOM05D002927 ORTHO05D003841 3.7e-47 191.8 110 80.9
THA.LOC104813572 Tarenaya hassleriana HOM05D002927 ORTHO05D003841 4.9e-47 191.4 121 71.9
ECA232G1494 Erigeron canadensis HOM05D002927 ORTHO05D003841 6.4e-47 191.0 126 71.4
Psat7g253400 Pisum sativum HOM05D002927 ORTHO05D003841 6.4e-47 191.0 133 67.7
THA.LOC104812472 Tarenaya hassleriana HOM05D002927 ORTHO05D003841 6.4e-47 191.0 121 71.1
CiPaw.02G152400 Carya illinoinensis HOM05D002927 ORTHO05D003841 8.3e-47 190.7 127 71.7
Phvul.010G151600 Phaseolus vulgaris HOM05D002927 ORTHO05D003841 8.3e-47 190.7 127 70.9
TAR624G0871 Trochodendron aralioides HOM05D002927 ORTHO05D003841 8.3e-47 190.7 127 70.9
Glyma.08G207800 Glycine max HOM05D002927 ORTHO05D003841 1.1e-46 190.3 127 70.9
VMungo0331G1773 Vigna mungo HOM05D002927 ORTHO05D003841 1.1e-46 190.3 127 70.9
CANSAT56G4360 Cannabis sativa HOM05D002927 ORTHO05D003841 1.4e-46 189.9 133 68.4
PSO782G4571 Papaver somniferum HOM05D002927 ORTHO05D003841 1.9e-46 189.5 127 70.9
Oeu033496.1 Olea europaea HOM05D002927 ORTHO05D003841 2.4e-46 189.1 144 64.6
Ca_20406_v3 Cicer arietinum L. HOM05D002927 ORTHO05D003841 3.2e-46 188.7 121 71.9
Gorai.009G132500 Gossypium raimondii HOM05D002927 ORTHO05D003841 3.2e-46 188.7 144 64.6
PSO063G0077 Papaver somniferum HOM05D002927 ORTHO05D003841 3.2e-46 188.7 127 70.9
Duzib235G0335 Durio zibethinus HOM05D002927 ORTHO05D003841 4.1e-46 188.3 110 80.0
ECA234G1721 Erigeron canadensis HOM05D002927 ORTHO05D003841 4.1e-46 188.3 144 63.9
TPR.G37235 Trifolium pratense HOM05D002927 ORTHO05D003841 4.1e-46 188.3 127 70.1
CsaV3_7G032990 Cucumis sativus L. HOM05D002927 ORTHO05D003841 5.4e-46 188.0 144 66.0
Glyma.07G034300 Glycine max HOM05D002927 ORTHO05D003841 5.4e-46 188.0 127 70.9
AUR62011613 Chenopodium quinoa HOM05D002927 ORTHO05D003841 7.0e-46 187.6 127 70.9
TPR.G24164 Trifolium pratense HOM05D002927 ORTHO05D003841 7.0e-46 187.6 119 73.1
Glyma.13G360900 Glycine max HOM05D002927 ORTHO05D003841 9.2e-46 187.2 127 69.3
TWI12G0585 Tripterygium wilfordii HOM05D002927 ORTHO05D003841 9.2e-46 187.2 111 79.3
Duzib192G1045 Durio zibethinus HOM05D002927 ORTHO05D003841 1.2e-45 186.8 144 62.5
HanXRQChr14g0455941 Helianthus annuus HOM05D002927 ORTHO05D003841 1.2e-45 186.8 121 71.9
Sc12g0009020 Simmondsia chinensis HOM05D002927 ORTHO05D003841 1.2e-45 186.8 121 72.7
Sc12g0009150 Simmondsia chinensis HOM05D002927 ORTHO05D003841 1.2e-45 186.8 121 72.7
vmacro18935 Vaccinium macrocarpon HOM05D002927 ORTHO05D003841 1.6e-45 186.4 125 72.8
EL10Ac9g21989 Beta vulgaris HOM05D002927 ORTHO05D003841 2.0e-45 186.0 127 70.1
Gohir.A05G127400 Gossypium hirsutum HOM05D002927 ORTHO05D003841 2.0e-45 186.0 144 63.2
AUR62016429 Chenopodium quinoa HOM05D002927 ORTHO05D003841 2.7e-45 185.7 127 69.3
Dinv30530 Davidia involucrata HOM05D002927 ORTHO05D003841 2.7e-45 185.7 144 66.7
Gohir.D05G128300 Gossypium hirsutum HOM05D002927 ORTHO05D003841 2.7e-45 185.7 144 63.9
Actinidia01792 Actinidia chinensis HOM05D002927 ORTHO05D003841 3.5e-45 185.3 125 72.0
Carub.0002s2716 Capsella rubella HOM05D002927 ORTHO05D003841 4.6e-45 184.9 121 68.6
CSS0017782 Camellia sinensis var. sinensis HOM05D002927 ORTHO05D003841 6.0e-45 184.5 121 73.6
Dinv38060 Davidia involucrata HOM05D002927 ORTHO05D003841 6.0e-45 184.5 125 71.2
DCAR_016229 Daucus carota HOM05D002927 ORTHO05D003841 7.8e-45 184.1 140 65.7
TWI75G0487 Tripterygium wilfordii HOM05D002927 ORTHO05D003841 7.8e-45 184.1 111 77.5
Cc04_g03600 Coffea canephora HOM05D002927 ORTHO05D003841 1.0e-44 183.7 125 71.2
Medtr4g011890 Medicago truncatula HOM05D002927 ORTHO05D003841 1.0e-44 183.7 113 77.0
Rhsim08G0218500 Rhododendron simsii HOM05D002927 ORTHO05D003841 1.0e-44 183.7 125 71.2
Aa31LG4G680 Aethionema arabicum HOM05D002927 ORTHO05D003841 1.3e-44 183.3 121 69.4
DCAR_021318 Daucus carota HOM05D002927 ORTHO05D003841 1.3e-44 183.3 133 66.2
Lalb_Chr24g0395741 Lupinus albus HOM05D002927 ORTHO05D003841 1.3e-44 183.3 127 67.7
Sabra03G0032300 Salix brachista HOM05D002927 ORTHO05D003841 1.7e-44 183.0 134 70.1
Aqoxy7G01853 Aquilegia oxysepala HOM05D002927 ORTHO05D003841 2.3e-44 182.6 127 66.9
Lj5C63T3 Lonicera japonica HOM05D002927 ORTHO05D003841 2.3e-44 182.6 144 63.9
Sed0021699 Sechium edule HOM05D002927 ORTHO05D003841 2.3e-44 182.6 144 64.6
VMungo1080G1114 Vigna mungo HOM05D002927 ORTHO05D003841 2.3e-44 182.6 125 68.8
ATR0037G015 Amborella trichopoda HOM05D002927 ORTHO05D003841 3.0e-44 182.2 144 60.4
THA.LOC104808208 Tarenaya hassleriana HOM05D002927 ORTHO05D003841 3.9e-44 181.8 121 69.4
Gohir.A02G122600 Gossypium hirsutum HOM05D002927 ORTHO05D003841 6.6e-44 181.0 144 61.1
HanXRQChr10g0314931 Helianthus annuus HOM05D002927 ORTHO05D003841 6.6e-44 181.0 144 62.5
Lalb_Chr14g0373541 Lupinus albus HOM05D002927 ORTHO05D003841 6.6e-44 181.0 127 67.7
Oeu063956.1 Olea europaea HOM05D002927 ORTHO05D003841 8.6e-44 180.6 125 68.8
Phvul.005G172700 Phaseolus vulgaris HOM05D002927 ORTHO05D003841 1.1e-43 180.3 125 68.0
SalBow2G0578 Salvia bowleyana HOM05D002927 ORTHO05D003841 1.1e-43 180.3 133 65.4
Peaxi162Scf00015g00253 Petunia axillaris HOM05D002927 ORTHO05D003841 1.9e-43 179.5 144 62.5
SGA_v2.0_scaffold37G14805 Striga asiatica HOM05D002927 ORTHO05D003841 1.9e-43 179.5 125 68.8
Thhalv10018100m.g Eutrema salsugineum HOM05D002927 ORTHO05D003841 2.5e-43 179.1 121 66.9
Nitab4.5_0003885g0030 Nicotiana tabacum HOM05D002927 ORTHO05D003841 3.3e-43 178.7 144 61.1
Nitab4.5_0000351g0230 Nicotiana tabacum HOM05D002927 ORTHO05D003841 4.3e-43 178.3 144 61.1
Nitab4.5_0003159g0060 Nicotiana tabacum HOM05D002927 ORTHO05D003841 5.6e-43 177.9 144 61.1
A02p23570 Brassica napus HOM05D002927 ORTHO05D003841 7.3e-43 177.6 121 67.8
A07p26660 Brassica napus HOM05D002927 ORTHO05D003841 7.3e-43 177.6 121 67.8
BraA02t07350Z Brassica rapa HOM05D002927 ORTHO05D003841 7.3e-43 177.6 121 67.8
BraA07t30309Z Brassica rapa HOM05D002927 ORTHO05D003841 7.3e-43 177.6 121 67.8
Eucgr.F03005 Eucalyptus grandis HOM05D002927 ORTHO05D003841 7.3e-43 177.6 145 61.4
BcaB05g25270 Brassica carinata HOM05D002927 ORTHO05D003841 9.5e-43 177.2 121 67.8
C02p37340 Brassica napus HOM05D002927 ORTHO05D003841 1.2e-42 176.8 121 66.9
Medtr2g102435 Medicago truncatula HOM05D002927 ORTHO05D003841 1.2e-42 176.8 134 65.7
Sp5g35400 Schrenkiella parvula HOM05D002927 ORTHO05D003841 1.2e-42 176.8 121 67.8
BcaC03g15969 Brassica carinata HOM05D002927 ORTHO05D003841 2.1e-42 176.0 133 63.2
AL2G41090 Arabidopsis lyrata HOM05D002927 ORTHO05D003841 2.8e-42 175.6 121 66.9
BcaB02g07275 Brassica carinata HOM05D002927 ORTHO05D003841 2.8e-42 175.6 121 66.9
BcaC08g45310 Brassica carinata HOM05D002927 ORTHO05D003841 2.8e-42 175.6 121 66.9
C06p29140 Brassica napus HOM05D002927 ORTHO05D003841 2.8e-42 175.6 121 66.9
BolC6t38078H Brassica oleracea HOM05D002927 ORTHO05D003841 2.8e-42 175.6 121 66.9
Nitab4.5_0002327g0070 Nicotiana tabacum HOM05D002927 ORTHO05D003841 2.8e-42 175.6 144 60.4
Hund06600 Selenicereus undatus HOM05D002927 ORTHO05D003841 3.6e-42 175.3 118 72.0
MSTRG.11092 Avicennia marina HOM05D002927 ORTHO05D003841 4.7e-42 174.9 125 68.0
MSTRG.22704 Avicennia marina HOM05D002927 ORTHO05D003841 6.2e-42 174.5 125 68.0
Solyc03g120350.3 Solanum lycopersicum HOM05D002927 ORTHO05D003841 1.1e-41 173.7 144 59.0
CARHR074830 Cardamine hirsuta HOM05D002927 ORTHO05D003841 1.4e-41 173.3 121 66.1
ClCG09G002330 Citrullus lanatus HOM05D002927 ORTHO05D003841 1.4e-41 173.3 144 61.8
Sopen03g039240 Solanum pennellii HOM05D002927 ORTHO05D003841 1.4e-41 173.3 144 59.0
Sopen06g025070 Solanum pennellii HOM05D002927 ORTHO05D003841 1.4e-41 173.3 144 60.4
AT1G80410 Arabidopsis thaliana HOM05D002927 ORTHO05D003841 1.8e-41 172.9 144 58.3
Solyc06g066790.3 Solanum lycopersicum HOM05D002927 ORTHO05D003841 1.8e-41 172.9 144 59.7
PGSC0003DMG400002639 Solanum tuberosum HOM05D002927 ORTHO05D003841 1.8e-41 172.9 144 59.0
CAN.G438.51 Capsicum annuum HOM05D002927 ORTHO05D003841 2.3e-41 172.6 128 64.1
Sed0022010 Sechium edule HOM05D002927 ORTHO05D003841 2.3e-41 172.6 144 62.5
BraA07t32030Z Brassica rapa HOM05D002927 ORTHO05D003841 6.8e-41 171.0 133 61.7
Migut.I00844 Erythranthe guttata HOM05D002927 ORTHO05D003841 6.8e-41 171.0 133 63.9
Peaxi162Scf00207g00840 Petunia axillaris HOM05D002927 ORTHO05D003841 1.5e-40 169.9 144 59.7
Os01g0617500 Oryza sativa ssp. japonica HOM05D002927 ORTHO05D003841 2.6e-40 169.1 133 60.2
A07p45260 Brassica napus HOM05D002927 ORTHO05D003841 4.4e-40 168.3 133 60.9
Zm00001eb159790 Zea mays HOM05D002927 ORTHO05D003841 5.8e-40 167.9 127 60.6
BcaC08g47587 Brassica carinata HOM05D002927 ORTHO05D003841 1.3e-39 166.8 121 62.8
C06p54110 Brassica napus HOM05D002927 ORTHO05D003841 1.3e-39 166.8 121 62.8
BolC6t40424H Brassica oleracea HOM05D002927 ORTHO05D003841 2.2e-39 166.0 121 62.0
CAN.G395.20 Capsicum annuum HOM05D002927 ORTHO05D003841 3.7e-39 165.2 144 57.6
HPP92_003639 Vanilla planifolia HOM05D002927 ORTHO05D003841 3.7e-39 165.2 127 59.8
CDE07G0468 Ceratophyllum demersum HOM05D002927 ORTHO05D003841 1.2e-37 160.2 127 62.2
SHI09684 Sapria himalayana HOM05D002927 ORTHO05D015040 6.0e-37 157.9 108 68.5
Cfa002048 Carpinus fangiana HOM05D002927 ORTHO05D003841 7.8e-37 157.5 88 83.0
Gorai.002G058200 Gossypium raimondii HOM05D002927 ORTHO05D003841 1.9e-35 152.9 147 54.4
MELO3C023369.2 Cucumis melo HOM05D002927 ORTHO05D003841 3.3e-35 152.1 115 67.0
SEGI_16698 Sequoiadendron giganteum HOM05D002927 ORTHO05D003841 7.3e-35 151.0 121 57.0
Psat1g176600 Pisum sativum HOM05D002927 ORTHO05D015040 2.8e-34 149.1 126 59.5
Gorai.005G132600 Gossypium raimondii HOM05D002927 ORTHO05D015040 2.6e-32 142.5 88 76.1
Gohir.D02G121566 Gossypium hirsutum HOM05D002927 ORTHO05D015040 2.2e-31 139.4 82 79.3
Mapoly0079s0051 Marchantia polymorpha HOM05D002927 ORTHO05D003841 5.4e-30 134.8 135 54.1
unitig_21.g20350 Utricularia gibba HOM05D002927 ORTHO05D003841 5.4e-30 134.8 105 62.9
AagrBONN_evm.TU.Sc2ySwM_228.5803 Anthoceros agrestis HOM05D002927 ORTHO05D003841 7.1e-30 134.4 129 48.8
Lj9C506T2 Lonicera japonica HOM05D002927 ORTHO05D003841 1.2e-29 133.7 144 52.8
CBR_g51323 Chara braunii HOM05D002927 ORTHO05D003841 1.3e-28 130.2 122 53.3
Actinidia15825 Actinidia chinensis HOM05D002927 ORTHO05D003841 3.0e-28 129.0 121 55.4
DCAR_029021 Daucus carota HOM05D002927 ORTHO05D003841 1.1e-27 127.1 104 60.6
Ah.01g020990 Amaranthus hybridus HOM05D002927 ORTHO05D003841 7.3e-27 124.4 127 52.8
Gohir.D08G138200 Gossypium hirsutum HOM05D002927 ORTHO05D015040 1.1e-25 120.6 68 77.9
Pp3c3_24080 Physcomitrium patens HOM05D002927 ORTHO05D003841 1.1e-25 120.6 112 50.0
Pp3c10_20750 Physcomitrium patens HOM05D002927 ORTHO05D003841 4.0e-25 118.6 112 47.3
Pp3c4_20560 Physcomitrium patens HOM05D002927 ORTHO05D003841 4.0e-25 118.6 112 46.4
Gorai.004G141700 Gossypium raimondii HOM05D002927 ORTHO05D015040 1.2e-24 117.1 68 76.5
PSO724G0063 Papaver somniferum HOM05D002927 ORTHO05D003841 5.4e-22 108.2 135 45.2
SMO364G0531 Selaginella moellendorffii HOM05D002927 ORTHO05D003841 4.6e-21 105.1 142 41.5
Psat1g029880 Pisum sativum HOM05D002927 ORTHO05D003841 1.0e-20 104.0 64 76.6
Gorai.010G148000 Gossypium raimondii HOM05D002927 ORTHO05D015040 7.3e-19 97.8 78 57.7
Duzib040G0001 Durio zibethinus HOM05D002927 ORTHO05D022232 5.8e-16 88.2 45 88.9
CDE06G0582 Ceratophyllum demersum HOM05D002927 ORTHO05D003841 9.9e-16 87.4 78 59.0
MCO04G539 Micromonas commoda HOM05D002927 ORTHO05D003841 1.4e-14 83.6 112 38.4
Gohir.D06G127550 Gossypium hirsutum HOM05D002927 ORTHO05D015040 1.9e-14 83.2 65 60.0
BolC2t09744H Brassica oleracea HOM05D002927 ORTHO05D003841 4.2e-14 82.0 52 71.2
Gohir.D04G107200 Gossypium hirsutum HOM05D002927 ORTHO05D010708 2.7e-13 79.3 52 71.2
PRCOL_00006302 Prasinoderma coloniale HOM05D002927 ORTHO05D003841 4.6e-13 78.6 104 42.3
arahy.Tifrunner.gnm1.ann1.B2555G Arachis hypogaea HOM05D002927 ORTHO05D018476 1.0e-12 77.4 44 81.8
Gorai.009G411400 Gossypium raimondii HOM05D002927 ORTHO05D010708 1.3e-12 77.0 43 81.4
Cfa026533 Carpinus fangiana HOM05D002927 ORTHO05D003841 6.7e-12 74.7 97 40.2
Cre06.g278225 Chlamydomonas reinhardtii HOM05D002927 ORTHO05D003841 6.2e-10 68.2 118 36.4
Duzib094G0001 Durio zibethinus HOM05D002927 ORTHO05D003841 9.9e-08 60.8 38 68.4
Lsat_1_v5_gn_5_178161 Lactuca sativa HOM05D002927 ORTHO05D015040 9.9e-08 60.8 52 57.7
arahy.Tifrunner.gnm1.ann1.064ICJ Arachis hypogaea HOM05D011890 ORTHO05D086551 7.1e-06 54.7 38 71.1


User provided reference genes

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