Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1.190 Carica papaya HOM05D006955 ORTHO05D008701 6.4e-107 391.0 227 100.0
GSVIVG01011919001 Vitis vinifera HOM05D006955 ORTHO05D008701 6.2e-86 321.2 227 71.8
TWI79G1443 Tripterygium wilfordii HOM05D006955 ORTHO05D008701 1.8e-85 319.7 224 73.7
COL.COLO4_07900 Corchorus olitorius HOM05D006955 ORTHO05D008701 6.9e-85 317.8 224 78.1
Actinidia14871 Actinidia chinensis HOM05D006955 ORTHO05D008701 1.2e-84 317.0 224 73.7
CANSAT56G1672 Cannabis sativa HOM05D006955 ORTHO05D008701 1.2e-84 317.0 223 72.6
Dinv21110 Davidia involucrata HOM05D006955 ORTHO05D008701 1.5e-84 316.6 224 72.3
THA.LOC104805251 Tarenaya hassleriana HOM05D006955 ORTHO05D008701 2.6e-84 315.8 227 74.9
Actinidia16638 Actinidia chinensis HOM05D006955 ORTHO05D008701 7.6e-84 314.3 224 73.2
Potri.008G118800 Populus trichocarpa HOM05D006955 ORTHO05D008701 9.9e-84 313.9 224 72.3
Gohir.A13G053700 Gossypium hirsutum HOM05D006955 ORTHO05D008701 2.2e-83 312.8 224 72.3
Gohir.D13G071200 Gossypium hirsutum HOM05D006955 ORTHO05D008701 2.2e-83 312.8 224 72.3
RcHm_v2.0_Chr4g0435501 Rosa chinensis HOM05D006955 ORTHO05D008701 2.9e-83 312.4 224 71.4
Haze_17460 Corylus avellana HOM05D006955 ORTHO05D008701 8.4e-83 310.8 224 74.1
Gorai.013G081500 Gossypium raimondii HOM05D006955 ORTHO05D008701 8.4e-83 310.8 224 71.9
CSS0004457 Camellia sinensis var. sinensis HOM05D006955 ORTHO05D008701 1.1e-82 310.5 224 71.4
QL01p043991 Quercus lobata HOM05D006955 ORTHO05D008701 1.1e-82 310.5 224 81.2
Sabra08G0090200 Salix brachista HOM05D006955 ORTHO05D008701 1.1e-82 310.5 224 71.4
Hund25084 Selenicereus undatus HOM05D006955 ORTHO05D008701 1.4e-82 310.1 224 72.3
MELO3C012231.2 Cucumis melo HOM05D006955 ORTHO05D008701 4.2e-82 308.5 224 71.0
Nn3g17799 Nelumbo nucifera HOM05D006955 ORTHO05D008701 4.2e-82 308.5 224 69.2
Prupe.1G308500 Prunus persica HOM05D006955 ORTHO05D008701 9.3e-82 307.4 223 69.5
Ah.02g127040 Amaranthus hybridus HOM05D006955 ORTHO05D008701 4.6e-81 305.1 224 71.4
EL10Ac6g14443 Beta vulgaris HOM05D006955 ORTHO05D008701 4.6e-81 305.1 224 71.9
Ca_28012_v3 Cicer arietinum L. HOM05D006955 ORTHO05D008701 6.0e-81 304.7 224 70.5
CsaV3_5G034170 Cucumis sativus L. HOM05D006955 ORTHO05D008701 6.0e-81 304.7 224 70.1
SGA_v2.0_scaffold124G33553 Striga asiatica HOM05D006955 ORTHO05D008701 1.0e-80 303.9 227 69.2
Sed0012161 Sechium edule HOM05D006955 ORTHO05D008701 8.7e-80 300.8 224 69.6
Migut.L01079 Erythranthe guttata HOM05D006955 ORTHO05D008701 1.1e-79 300.4 227 68.3
Sp1g11840 Schrenkiella parvula HOM05D006955 ORTHO05D008701 1.1e-79 300.4 224 64.7
Sc11g0003240 Simmondsia chinensis HOM05D006955 ORTHO05D008701 1.1e-79 300.4 224 66.1
Sc11g0003300 Simmondsia chinensis HOM05D006955 ORTHO05D008701 1.1e-79 300.4 224 66.1
Lj2g0004168 Lotus japonicus HOM05D006955 ORTHO05D008701 1.5e-79 300.1 224 69.2
Manes.14G100100 Manihot esculenta HOM05D006955 ORTHO05D008701 1.5e-79 300.1 215 72.1
Glyma.08G260400 Glycine max HOM05D006955 ORTHO05D008701 1.9e-79 299.7 224 69.6
TAR622G0049 Trochodendron aralioides HOM05D006955 ORTHO05D008701 1.9e-79 299.7 224 75.9
Lj3C1017T15 Lonicera japonica HOM05D006955 ORTHO05D008701 2.5e-79 299.3 224 68.8
Psat2g093000 Pisum sativum HOM05D006955 ORTHO05D008701 2.5e-79 299.3 224 68.3
TPR.G38250 Trifolium pratense HOM05D006955 ORTHO05D008701 2.5e-79 299.3 224 68.8
AL1G25090 Arabidopsis lyrata HOM05D006955 ORTHO05D008701 3.3e-79 298.9 224 74.1
Thhalv10008697m.g Eutrema salsugineum HOM05D006955 ORTHO05D008701 3.3e-79 298.9 224 71.9
Aqoxy3G00330 Aquilegia oxysepala HOM05D006955 ORTHO05D008701 5.6e-79 298.1 224 67.4
Duzib251G0691 Durio zibethinus HOM05D006955 ORTHO05D008701 1.3e-78 297.0 224 77.2
Phvul.002G082400 Phaseolus vulgaris HOM05D006955 ORTHO05D008701 1.3e-78 297.0 224 68.3
MSTRG.13515 Avicennia marina HOM05D006955 ORTHO05D008701 1.6e-78 296.6 227 67.8
Lalb_Chr17g0342031 Lupinus albus HOM05D006955 ORTHO05D008701 1.6e-78 296.6 224 68.3
PSO017G5158 Papaver somniferum HOM05D006955 ORTHO05D008701 2.1e-78 296.2 224 68.8
Ciclev10032679m.g Citrus clementina HOM05D006955 ORTHO05D008701 2.8e-78 295.8 221 79.2
Cc11_g10340 Coffea canephora HOM05D006955 ORTHO05D008701 2.8e-78 295.8 224 68.8
Peaxi162Scf00382g00128 Petunia axillaris HOM05D006955 ORTHO05D008701 3.7e-78 295.4 224 67.9
Rhsim12G0082400 Rhododendron simsii HOM05D006955 ORTHO05D008701 3.7e-78 295.4 234 66.7
AUR62002894 Chenopodium quinoa HOM05D006955 ORTHO05D008701 4.8e-78 295.0 224 66.1
Eucgr.G02335 Eucalyptus grandis HOM05D006955 ORTHO05D008701 6.2e-78 294.7 227 67.0
Aa31LG1G1480 Aethionema arabicum HOM05D006955 ORTHO05D008701 8.1e-78 294.3 224 74.1
arahy.Tifrunner.gnm1.ann1.0188KY Arachis hypogaea HOM05D006955 ORTHO05D008701 8.1e-78 294.3 224 69.2
arahy.Tifrunner.gnm1.ann1.5TE0FE Arachis hypogaea HOM05D006955 ORTHO05D008701 8.1e-78 294.3 224 69.2
arahy.Tifrunner.gnm1.ann1.FS5FM4 Arachis hypogaea HOM05D006955 ORTHO05D008701 1.1e-77 293.9 224 68.8
PGR119G2132 Punica granatum HOM05D006955 ORTHO05D008701 1.4e-77 293.5 227 67.8
Atru.chr11.1296 Acer truncatum HOM05D006955 ORTHO05D008701 3.1e-77 292.4 227 66.5
CARHR013710 Cardamine hirsuta HOM05D006955 ORTHO05D008701 3.1e-77 292.4 224 70.5
MD16G1044800 Malus domestica HOM05D006955 ORTHO05D008701 4.0e-77 292.0 224 75.0
Medtr5g055150 Medicago truncatula HOM05D006955 ORTHO05D008701 4.0e-77 292.0 224 67.4
PSO478G1614 Papaver somniferum HOM05D006955 ORTHO05D008701 5.3e-77 291.6 224 67.4
AT1G13330 Arabidopsis thaliana HOM05D006955 ORTHO05D008701 6.9e-77 291.2 224 73.2
C05p09970 Brassica napus HOM05D006955 ORTHO05D008701 1.2e-76 290.4 224 71.4
FAN07G1824 Fragaria x ananassa HOM05D006955 ORTHO05D008701 1.2e-76 290.4 220 66.8
TAR629G1122 Trochodendron aralioides HOM05D006955 ORTHO05D008701 2.0e-76 289.7 249 60.2
MD13G1044000 Malus domestica HOM05D006955 ORTHO05D008701 7.6e-76 287.7 224 74.1
FAN12G2251 Fragaria x ananassa HOM05D006955 ORTHO05D008701 1.0e-75 287.3 220 72.3
FAN22G1329 Fragaria x ananassa HOM05D006955 ORTHO05D008701 1.3e-75 287.0 241 63.1
FAN12G1265 Fragaria x ananassa HOM05D006955 ORTHO05D008701 2.2e-75 286.2 232 70.3
Oeu033300.1 Olea europaea HOM05D006955 ORTHO05D008701 2.9e-75 285.8 260 60.0
SalBow8G1483 Salvia bowleyana HOM05D006955 ORTHO05D008701 2.9e-75 285.8 224 66.1
vmacro01371 Vaccinium macrocarpon HOM05D006955 ORTHO05D008701 2.9e-75 285.8 264 59.5
A06p08430 Brassica napus HOM05D006955 ORTHO05D008701 3.8e-75 285.4 224 71.0
BraA06t24039Z Brassica rapa HOM05D006955 ORTHO05D008701 3.8e-75 285.4 224 71.0
Nitab4.5_0004895g0100 Nicotiana tabacum HOM05D006955 ORTHO05D008701 6.5e-75 284.6 224 66.1
BcaC05g25057 Brassica carinata HOM05D006955 ORTHO05D008701 1.9e-74 283.1 224 70.5
BcaC05g25064 Brassica carinata HOM05D006955 ORTHO05D008701 1.9e-74 283.1 224 70.5
BolC5t29739H Brassica oleracea HOM05D006955 ORTHO05D008701 1.9e-74 283.1 224 70.5
VMungo1215G2393 Vigna mungo HOM05D006955 ORTHO05D008701 2.5e-74 282.7 227 66.1
Glyma.01G083100 Glycine max HOM05D006955 ORTHO05D008701 7.1e-74 281.2 225 66.7
Carub.0001s1306 Capsella rubella HOM05D006955 ORTHO05D008701 1.8e-72 276.6 224 70.1
ECA233G4186 Erigeron canadensis HOM05D006955 ORTHO05D008701 2.3e-72 276.2 224 62.1
AUR62035251 Chenopodium quinoa HOM05D006955 ORTHO05D008701 1.1e-71 273.9 224 70.5
DCAR_023669 Daucus carota HOM05D006955 ORTHO05D008701 1.1e-71 273.9 207 67.1
HanXRQChr08g0214231 Helianthus annuus HOM05D006955 ORTHO05D008701 2.8e-70 269.2 224 68.8
Thecc.02G357700 Theobroma cacao HOM05D006955 ORTHO05D008701 2.8e-70 269.2 194 72.2
ClCG05G022860 Citrullus lanatus HOM05D006955 ORTHO05D008701 3.7e-70 268.9 238 62.6
CiPaw.15G005500 Carya illinoinensis HOM05D006955 ORTHO05D008701 2.4e-69 266.2 195 77.9
Lsat_1_v5_gn_8_38900 Lactuca sativa HOM05D006955 ORTHO05D008701 5.3e-69 265.0 207 65.7
ATR0665G168 Amborella trichopoda HOM05D006955 ORTHO05D008701 1.2e-68 263.8 224 60.3
BolC5t29750H Brassica oleracea HOM05D006955 ORTHO05D008701 6.5e-67 258.1 207 61.4
Nitab4.5_0003823g0050 Nicotiana tabacum HOM05D006955 ORTHO05D008701 7.9e-65 251.1 202 63.9
Solyc05g009560.4 Solanum lycopersicum HOM05D006955 ORTHO05D008701 2.3e-64 249.6 222 68.0
Sopen05g005370 Solanum pennellii HOM05D006955 ORTHO05D008701 2.3e-64 249.6 222 68.0
Zm00001eb216450 Zea mays HOM05D006955 ORTHO05D008701 2.5e-63 246.1 224 63.4
CAN.G656.28 Capsicum annuum HOM05D006955 ORTHO05D008701 4.8e-62 241.9 222 66.2
HPP92_011092 Vanilla planifolia HOM05D006955 ORTHO05D008701 4.5e-60 235.3 214 55.6
SHI33974 Sapria himalayana HOM05D006955 ORTHO05D008701 5.0e-59 231.9 223 56.1
HPP92_011108 Vanilla planifolia HOM05D006955 ORTHO05D008701 1.9e-58 229.9 207 55.6
CDE05G2755 Ceratophyllum demersum HOM05D006955 ORTHO05D008701 1.0e-56 224.2 235 51.5
Mapoly0015s0151 Marchantia polymorpha HOM05D006955 ORTHO05D008701 2.8e-54 216.1 221 50.2
SEGI_38068 Sequoiadendron giganteum HOM05D006955 ORTHO05D008701 3.7e-54 215.7 193 56.5
SMO203G0092 Selaginella moellendorffii HOM05D006955 ORTHO05D008701 3.4e-52 209.1 222 49.5
CBR_g3130 Chara braunii HOM05D006955 ORTHO05D008701 4.2e-42 175.6 213 43.2
PGSC0003DMG402012965 Solanum tuberosum HOM05D006955 ORTHO05D008701 4.8e-38 162.2 139 59.0
CAN.G706.23 Capsicum annuum HOM05D006955 ORTHO05D008701 5.3e-37 158.7 163 54.0
CAN.G884.17 Capsicum annuum HOM05D000526 ORTHO05D000956 2.2e-35 153.3 210 46.2
Pp3c23_21510 Physcomitrium patens HOM05D006955 ORTHO05D008701 1.8e-32 143.7 188 39.9
Potri.010G127101 Populus trichocarpa HOM05D006955 ORTHO05D008701 1.6e-28 130.6 109 63.3
unitig_27.g25246 Utricularia gibba HOM05D002984 ORTHO05D003561 2.2e-27 126.7 99 66.7
unitig_27.g25247 Utricularia gibba HOM05D006955 ORTHO05D008701 3.8e-27 125.9 83 69.9
Cre06.g284400 Chlamydomonas reinhardtii HOM05D006955 ORTHO05D008701 6.8e-16 88.6 220 34.1
MCO07G460 Micromonas commoda HOM05D006955 ORTHO05D008701 3.5e-12 76.3 200 26.0
Medtr5g055130 Medicago truncatula HOM05D002518 ORTHO05D002630 8.0e-09 65.1 119 42.0
PRCOL_00000208 Prasinoderma coloniale HOM05D006955 ORTHO05D008701 1.4e-08 64.3 206 27.2
Medtr4g007850 Medicago truncatula HOM05D003710 ORTHO05D258575 3.1e-08 63.2 95 45.3


User provided reference genes

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