Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc0.159 Carica papaya HOM05D003919 ORTHO05D004906 3.6e-97 358.2 179 100.0
CAN.G157.22 Capsicum annuum HOM05D003919 ORTHO05D004906 1.4e-53 213.4 121 81.8
Solyc02g014190.4 Solanum lycopersicum HOM05D003919 ORTHO05D004906 1.4e-53 213.4 121 81.8
Hund24370 Selenicereus undatus HOM05D003919 ORTHO05D004906 3.2e-53 212.2 121 83.5
AUR62015231 Chenopodium quinoa HOM05D003919 ORTHO05D004906 7.1e-53 211.1 121 83.5
AUR62017695 Chenopodium quinoa HOM05D003919 ORTHO05D004906 7.1e-53 211.1 121 83.5
Sopen02g003520 Solanum pennellii HOM05D003919 ORTHO05D004906 9.3e-53 210.7 121 81.0
Thecc.02G160300 Theobroma cacao HOM05D003919 ORTHO05D004906 1.6e-52 209.9 121 82.6
Gohir.D12G137500 Gossypium hirsutum HOM05D003919 ORTHO05D004906 2.1e-52 209.5 121 81.8
Gorai.008G149000 Gossypium raimondii HOM05D003919 ORTHO05D004906 2.1e-52 209.5 121 81.8
Ah.01g012280 Amaranthus hybridus HOM05D003919 ORTHO05D004906 4.6e-52 208.4 121 82.6
Gohir.A12G134051 Gossypium hirsutum HOM05D003919 ORTHO05D004906 6.1e-52 208.0 121 81.0
Haze_11754 Corylus avellana HOM05D003919 ORTHO05D004906 7.9e-52 207.6 116 87.9
Cfa008737 Carpinus fangiana HOM05D003919 ORTHO05D004906 2.3e-51 206.1 122 83.6
Cc11_g02410 Coffea canephora HOM05D003919 ORTHO05D004906 2.3e-51 206.1 119 82.4
CiPaw.05G168700 Carya illinoinensis HOM05D003919 ORTHO05D004906 3.0e-51 205.7 117 84.6
Duzib132G0455 Durio zibethinus HOM05D003919 ORTHO05D004906 6.7e-51 204.5 121 80.2
THA.LOC104819381 Tarenaya hassleriana HOM05D003919 ORTHO05D004906 8.7e-51 204.1 115 84.3
GSVIVG01012044001 Vitis vinifera HOM05D003919 ORTHO05D004906 8.7e-51 204.1 115 83.5
Sp2g24010 Schrenkiella parvula HOM05D003919 ORTHO05D004906 1.1e-50 203.8 125 78.4
Ciclev10030469m.g Citrus clementina HOM05D003919 ORTHO05D004906 2.5e-50 202.6 121 80.2
Thhalv10003499m.g Eutrema salsugineum HOM05D003919 ORTHO05D004906 2.5e-50 202.6 125 78.4
COL.COLO4_13756 Corchorus olitorius HOM05D003919 ORTHO05D004906 3.3e-50 202.2 115 83.5
Lalb_Chr04g0258931 Lupinus albus HOM05D003919 ORTHO05D004906 3.3e-50 202.2 121 80.2
AL6G34300 Arabidopsis lyrata HOM05D003919 ORTHO05D004906 5.7e-50 201.4 125 77.6
AT5G23110 Arabidopsis thaliana HOM05D003919 ORTHO05D004906 5.7e-50 201.4 125 77.6
A03p46400 Brassica napus HOM05D003919 ORTHO05D004906 5.7e-50 201.4 125 76.8
BraA03t13766Z Brassica rapa HOM05D003919 ORTHO05D004906 5.7e-50 201.4 125 76.8
Carub.0006s2090 Capsella rubella HOM05D003919 ORTHO05D004906 5.7e-50 201.4 125 77.6
MELO3C023597.2 Cucumis melo HOM05D003919 ORTHO05D004906 5.7e-50 201.4 130 73.8
CsaV3_7G030590 Cucumis sativus L. HOM05D003919 ORTHO05D004906 5.7e-50 201.4 130 73.8
Medtr1g037310 Medicago truncatula HOM05D003919 ORTHO05D004906 5.7e-50 201.4 121 81.8
Sed0027848 Sechium edule HOM05D003919 ORTHO05D004906 5.7e-50 201.4 124 76.6
BolC7t44964H Brassica oleracea HOM05D003919 ORTHO05D004906 7.4e-50 201.1 125 76.8
Atru.chr11.1166 Acer truncatum HOM05D003919 ORTHO05D004906 9.7e-50 200.7 118 81.4
TWI53G0046 Tripterygium wilfordii HOM05D003919 ORTHO05D004906 9.7e-50 200.7 119 82.4
RcHm_v2.0_Chr4g0446631 Rosa chinensis HOM05D003919 ORTHO05D004906 1.3e-49 200.3 121 81.0
CARHR190420 Cardamine hirsuta HOM05D003919 ORTHO05D004906 1.6e-49 199.9 125 76.8
ClCG09G004560 Citrullus lanatus HOM05D003919 ORTHO05D004906 1.6e-49 199.9 114 82.5
FvH4_4g36870 Fragaria vesca HOM05D003919 ORTHO05D004906 1.6e-49 199.9 119 82.4
FAN12G0111 Fragaria x ananassa HOM05D003919 ORTHO05D004906 1.6e-49 199.9 119 82.4
FAN14G1298 Fragaria x ananassa HOM05D003919 ORTHO05D004906 1.6e-49 199.9 114 85.1
Ca_25292_v3 Cicer arietinum L. HOM05D003919 ORTHO05D004906 2.2e-49 199.5 121 81.0
Lj2g0026278 Lotus japonicus HOM05D003919 ORTHO05D004906 2.8e-49 199.1 121 80.2
TPR.G8246 Trifolium pratense HOM05D003919 ORTHO05D004906 2.8e-49 199.1 121 80.2
C07p44430 Brassica napus HOM05D003919 ORTHO05D004906 3.7e-49 198.7 109 86.2
ECA233G1217 Erigeron canadensis HOM05D003919 ORTHO05D004906 3.7e-49 198.7 120 78.3
MD16G1001800 Malus domestica HOM05D003919 ORTHO05D004906 3.7e-49 198.7 119 81.5
FAN17G2968 Fragaria x ananassa HOM05D003919 ORTHO05D004906 4.8e-49 198.4 119 81.5
FAN22G1631 Fragaria x ananassa HOM05D003919 ORTHO05D004906 4.8e-49 198.4 119 81.5
Aa31LG11G2600 Aethionema arabicum HOM05D003919 ORTHO05D004906 6.3e-49 198.0 125 76.8
FAN27G1315 Fragaria x ananassa HOM05D003919 ORTHO05D004906 6.3e-49 198.0 133 73.7
Oeu055860.1 Olea europaea HOM05D003919 ORTHO05D004906 6.3e-49 198.0 107 86.9
arahy.Tifrunner.gnm1.ann1.5S361I Arachis hypogaea HOM05D003919 ORTHO05D004906 1.8e-48 196.4 118 78.8
arahy.Tifrunner.gnm1.ann1.FE7SUA Arachis hypogaea HOM05D003919 ORTHO05D004906 2.4e-48 196.1 118 78.0
DCAR_026901 Daucus carota HOM05D003919 ORTHO05D004906 2.4e-48 196.1 115 81.7
Migut.J01108 Erythranthe guttata HOM05D003919 ORTHO05D004906 2.4e-48 196.1 113 82.3
SGA_v2.0_scaffold17G08205 Striga asiatica HOM05D003919 ORTHO05D004906 2.4e-48 196.1 114 83.3
FAN07G2510 Fragaria x ananassa HOM05D003919 ORTHO05D004906 3.1e-48 195.7 115 82.6
Lsat_1_v5_gn_8_31660 Lactuca sativa HOM05D003919 ORTHO05D004906 3.1e-48 195.7 120 78.3
CSS0046709 Camellia sinensis var. sinensis HOM05D003919 ORTHO05D004906 4.1e-48 195.3 115 80.0
Glyma.20G003400 Glycine max HOM05D003919 ORTHO05D004906 5.3e-48 194.9 118 80.5
HanXRQChr12g0366421 Helianthus annuus HOM05D003919 ORTHO05D004906 5.3e-48 194.9 120 77.5
Lj6C719G10 Lonicera japonica HOM05D003919 ORTHO05D004906 9.0e-48 194.1 115 80.0
Prupe.1G347000 Prunus persica HOM05D003919 ORTHO05D004906 9.0e-48 194.1 118 79.7
MBI03_g34501_MAGBIO Magnolia biondii HOM05D003919 ORTHO05D004906 1.5e-47 193.4 113 80.5
Psat6g099280 Pisum sativum HOM05D003919 ORTHO05D004906 1.5e-47 193.4 121 77.7
VMungo0251G1503 Vigna mungo HOM05D003919 ORTHO05D004906 1.5e-47 193.4 115 80.9
FAN25G1432 Fragaria x ananassa HOM05D003919 ORTHO05D004906 3.4e-47 192.2 113 83.2
Eucgr.J00863 Eucalyptus grandis HOM05D003919 ORTHO05D004906 4.5e-47 191.8 114 79.8
Nn4g24949 Nelumbo nucifera HOM05D003919 ORTHO05D004906 4.5e-47 191.8 121 76.0
Actinidia04322 Actinidia chinensis HOM05D003919 ORTHO05D004906 7.7e-47 191.0 118 78.0
ATR0618G139 Amborella trichopoda HOM05D003919 ORTHO05D004906 7.7e-47 191.0 114 79.8
TAR374G0728 Trochodendron aralioides HOM05D003919 ORTHO05D004906 1.7e-46 189.9 121 75.2
Aqoxy3G04259 Aquilegia oxysepala HOM05D003919 ORTHO05D004906 2.9e-46 189.1 121 72.7
HPP92_012883 Vanilla planifolia HOM05D000456 ORTHO05D004906 2.9e-46 189.1 116 77.6
QL03p046003 Quercus lobata HOM05D003919 ORTHO05D004906 8.5e-46 187.6 121 77.7
Peaxi162Scf00363g00329 Petunia axillaris HOM05D003919 ORTHO05D004906 3.2e-45 185.7 118 76.3
SEGI_22186 Sequoiadendron giganteum HOM05D003919 ORTHO05D004906 2.7e-44 182.6 108 77.8
PSO782G3793 Papaver somniferum HOM05D003919 ORTHO05D004906 2.3e-43 179.5 121 71.1
Potri.005G093000 Populus trichocarpa HOM05D003919 ORTHO05D004906 3.0e-43 179.1 118 75.4
Sabra05G0077100 Salix brachista HOM05D003919 ORTHO05D004906 5.1e-43 178.3 118 74.6
Zm00001eb066370 Zea mays HOM05D003919 ORTHO05D004906 6.7e-43 177.9 121 71.9
Pp3c9_15860 Physcomitrium patens HOM05D003919 ORTHO05D004906 1.1e-42 177.2 116 72.4
SMO164G0254 Selaginella moellendorffii HOM05D003919 ORTHO05D004906 1.1e-42 177.2 111 73.0
Nitab4.5_0000405g0040 Nicotiana tabacum HOM05D003919 ORTHO05D004906 1.5e-42 176.8 101 82.2
Nitab4.5_0003853g0020 Nicotiana tabacum HOM05D003919 ORTHO05D004906 1.5e-42 176.8 101 82.2
Os04g0675101 Oryza sativa ssp. japonica HOM05D003919 ORTHO05D004906 2.5e-42 176.0 113 73.5
PGR044G0490 Punica granatum HOM05D003919 ORTHO05D004906 2.5e-42 176.0 113 75.2
CDE08G0505 Ceratophyllum demersum HOM05D003919 ORTHO05D004906 3.3e-42 175.6 129 65.9
Mapoly0175s0011 Marchantia polymorpha HOM05D003919 ORTHO05D004906 4.3e-42 175.3 112 74.1
AagrBONN_evm.TU.Sc2ySwM_344.4345 Anthoceros agrestis HOM05D003919 ORTHO05D004906 2.2e-41 172.9 121 66.1
HPP92_012910 Vanilla planifolia HOM05D003919 ORTHO05D004906 1.5e-39 166.8 102 78.4
vmacro10895 Vaccinium macrocarpon HOM05D003919 ORTHO05D004906 1.7e-38 163.3 90 85.6
EL10Ac9g22945 Beta vulgaris HOM05D003919 ORTHO05D004906 1.6e-36 156.8 93 81.7
Cre01.g044850 Chlamydomonas reinhardtii HOM05D003919 ORTHO05D004906 1.5e-34 150.2 120 62.5
MCO02G364 Micromonas commoda HOM05D003919 ORTHO05D004906 4.4e-34 148.7 121 59.5
SEGI_11727 Sequoiadendron giganteum HOM05D003919 ORTHO05D004906 2.2e-22 109.8 110 46.4
SEGI_14080 Sequoiadendron giganteum HOM05D003919 ORTHO05D004906 2.2e-22 109.8 110 46.4
Sc06g0007940 Simmondsia chinensis HOM05D003919 ORTHO05D004906 5.0e-22 108.6 108 48.1
C07p44420 Brassica napus HOM05D003919 ORTHO05D004906 1.1e-21 107.5 108 48.1
COL.COLO4_13755 Corchorus olitorius HOM05D003919 ORTHO05D004906 4.2e-21 105.5 143 39.9
Glyma.09G282200 Glycine max HOM05D003919 ORTHO05D004906 4.2e-21 105.5 108 47.2
Manes.04G066100 Manihot esculenta HOM05D003919 ORTHO05D004906 5.5e-21 105.1 108 47.2
Rhsim09G0081500 Rhododendron simsii HOM05D003919 ORTHO05D004906 9.4e-21 104.4 120 41.7
Gohir.A12G133950 Gossypium hirsutum HOM05D003919 ORTHO05D004906 1.2e-20 104.0 108 45.4
HPP92_012909 Vanilla planifolia HOM05D003919 ORTHO05D004906 3.6e-20 102.4 108 44.4
TAR374G1487 Trochodendron aralioides HOM05D003919 ORTHO05D004906 4.7e-20 102.1 108 44.4
Lj6A719G43 Lonicera japonica HOM05D003919 ORTHO05D004906 1.0e-19 100.9 108 46.3
Dinv11717 Davidia involucrata HOM05D003919 ORTHO05D004906 2.3e-19 99.8 108 45.4
SEGI_33076 Sequoiadendron giganteum HOM05D003919 ORTHO05D004188 9.8e-18 94.4 92 45.7
Oeu055859.1 Olea europaea HOM05D003919 ORTHO05D004906 1.4e-16 90.5 97 42.3
FvH4_5g39264 Fragaria vesca HOM05D000731 ORTHO05D004906 5.0e-14 82.0 49 83.7
FAN08G1746 Fragaria x ananassa HOM05D003919 ORTHO05D005006 5.0e-14 82.0 83 59.0
Psat0s1455g0040 Pisum sativum HOM05D003919 ORTHO05D004906 6.1e-12 75.1 76 46.1
HPP92_012876 Vanilla planifolia HOM05D003919 ORTHO05D004906 2.6e-10 69.7 101 36.6
GSVIVG01014936001 Vitis vinifera HOM05D003919 ORTHO05D004906 1.8e-08 63.5 120 35.0


User provided reference genes

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