Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc0.157 Carica papaya HOM05D003919 ORTHO05D004906 1.5e-231 805.8 400 100.0
AT5G23110 Arabidopsis thaliana HOM05D003919 ORTHO05D004906 6.0e-108 395.2 244 78.7
AL6G34300 Arabidopsis lyrata HOM05D003919 ORTHO05D004906 8.6e-107 391.3 244 78.3
CiPaw.05G168700 Carya illinoinensis HOM05D003919 ORTHO05D004906 4.3e-106 389.0 244 77.0
Duzib132G0455 Durio zibethinus HOM05D003919 ORTHO05D004906 4.3e-106 389.0 242 76.9
Sp2g24010 Schrenkiella parvula HOM05D003919 ORTHO05D004906 8.1e-105 384.8 244 76.2
CARHR190420 Cardamine hirsuta HOM05D003919 ORTHO05D004906 1.4e-104 384.0 244 76.6
Aa31LG11G2600 Aethionema arabicum HOM05D003919 ORTHO05D004906 2.3e-104 383.3 244 76.2
Thhalv10003499m.g Eutrema salsugineum HOM05D003919 ORTHO05D004906 6.8e-104 381.7 244 75.0
Thecc.02G160300 Theobroma cacao HOM05D003919 ORTHO05D004906 6.8e-104 381.7 243 76.5
Carub.0006s2090 Capsella rubella HOM05D003919 ORTHO05D004906 1.2e-103 380.9 244 76.6
THA.LOC104819381 Tarenaya hassleriana HOM05D003919 ORTHO05D004906 1.5e-103 380.6 244 74.6
Ciclev10030469m.g Citrus clementina HOM05D003919 ORTHO05D004906 2.0e-103 380.2 241 73.9
QL03p046003 Quercus lobata HOM05D003919 ORTHO05D004906 5.8e-103 378.6 244 75.0
GSVIVG01012044001 Vitis vinifera HOM05D003919 ORTHO05D004906 5.8e-103 378.6 244 75.8
A03p46400 Brassica napus HOM05D003919 ORTHO05D004906 2.9e-102 376.3 245 73.9
Actinidia04322 Actinidia chinensis HOM05D003919 ORTHO05D004906 4.9e-102 375.6 244 74.6
BraA03t13766Z Brassica rapa HOM05D003919 ORTHO05D004906 4.9e-102 375.6 244 74.2
Rhsim09G0081500 Rhododendron simsii HOM05D003919 ORTHO05D004906 4.9e-102 375.6 273 68.1
Lj6C719G10 Lonicera japonica HOM05D003919 ORTHO05D004906 1.4e-101 374.0 241 74.7
BolC7t44964H Brassica oleracea HOM05D003919 ORTHO05D004906 1.9e-101 373.6 244 74.2
Cfa008737 Carpinus fangiana HOM05D003919 ORTHO05D004906 5.4e-101 372.1 244 75.0
CSS0046709 Camellia sinensis var. sinensis HOM05D003919 ORTHO05D004906 7.1e-101 371.7 241 73.0
Nn4g24949 Nelumbo nucifera HOM05D003919 ORTHO05D004906 1.2e-100 370.9 244 70.9
Atru.chr11.1166 Acer truncatum HOM05D003919 ORTHO05D004906 4.6e-100 369.0 242 71.9
vmacro10895 Vaccinium macrocarpon HOM05D003919 ORTHO05D004906 4.6e-100 369.0 242 74.0
Prupe.1G347000 Prunus persica HOM05D003919 ORTHO05D004906 6.0e-100 368.6 245 71.4
TWI53G0046 Tripterygium wilfordii HOM05D003919 ORTHO05D004906 1.3e-99 367.5 244 73.0
Cc11_g02410 Coffea canephora HOM05D003919 ORTHO05D004906 8.6e-99 364.8 246 71.1
Gohir.D12G137500 Gossypium hirsutum HOM05D003919 ORTHO05D004906 1.1e-98 364.4 243 72.0
AUR62015231 Chenopodium quinoa HOM05D003919 ORTHO05D004906 1.9e-98 363.6 244 72.1
Gohir.A12G134051 Gossypium hirsutum HOM05D003919 ORTHO05D004906 1.9e-98 363.6 243 72.4
EL10Ac9g22945 Beta vulgaris HOM05D003919 ORTHO05D004906 4.3e-98 362.5 244 72.1
AUR62017695 Chenopodium quinoa HOM05D003919 ORTHO05D004906 5.6e-98 362.1 244 71.7
Gorai.008G149000 Gossypium raimondii HOM05D003919 ORTHO05D004906 5.6e-98 362.1 243 71.6
PSO782G3793 Papaver somniferum HOM05D003919 ORTHO05D004906 5.6e-98 362.1 244 70.9
Hund24370 Selenicereus undatus HOM05D003919 ORTHO05D004906 9.6e-98 361.3 242 71.9
Aqoxy3G04259 Aquilegia oxysepala HOM05D003919 ORTHO05D004906 2.1e-97 360.1 242 72.7
Sopen02g003520 Solanum pennellii HOM05D003919 ORTHO05D004906 2.8e-97 359.8 241 72.2
MBI03_g34502_MAGBIO Magnolia biondii HOM05D003919 ORTHO05D004906 4.7e-97 359.0 242 70.2
Haze_11754 Corylus avellana HOM05D003919 ORTHO05D004906 8.1e-97 358.2 231 75.8
FAN12G0111 Fragaria x ananassa HOM05D003919 ORTHO05D004906 8.1e-97 358.2 244 68.4
Ah.01g012280 Amaranthus hybridus HOM05D003919 ORTHO05D004906 1.4e-96 357.5 244 71.3
MD16G1001800 Malus domestica HOM05D003919 ORTHO05D004906 1.8e-96 357.1 241 70.1
arahy.Tifrunner.gnm1.ann1.FE7SUA Arachis hypogaea HOM05D003919 ORTHO05D004906 2.4e-96 356.7 240 70.8
DCAR_026901 Daucus carota HOM05D003919 ORTHO05D004906 2.4e-96 356.7 242 72.3
FvH4_4g36870 Fragaria vesca HOM05D003919 ORTHO05D004906 3.1e-96 356.3 244 68.0
Lj2g0026278 Lotus japonicus HOM05D003919 ORTHO05D004906 6.8e-96 355.1 240 70.8
VMungo0251G1503 Vigna mungo HOM05D003919 ORTHO05D004906 8.9e-96 354.8 242 70.2
PGR044G0490 Punica granatum HOM05D003919 ORTHO05D004906 3.4e-95 352.8 241 71.0
Migut.J01108 Erythranthe guttata HOM05D003919 ORTHO05D004906 7.6e-95 351.7 240 70.0
Medtr1g037310 Medicago truncatula HOM05D003919 ORTHO05D004906 7.6e-95 351.7 240 69.6
RcHm_v2.0_Chr4g0446631 Rosa chinensis HOM05D003919 ORTHO05D004906 7.6e-95 351.7 244 67.6
CAN.G157.22 Capsicum annuum HOM05D003919 ORTHO05D004906 1.3e-94 350.9 241 71.0
TPR.G8246 Trifolium pratense HOM05D003919 ORTHO05D004906 1.7e-94 350.5 242 68.6
Lalb_Chr04g0258931 Lupinus albus HOM05D003919 ORTHO05D004906 2.2e-94 350.1 240 70.4
FAN17G2968 Fragaria x ananassa HOM05D003919 ORTHO05D004906 3.8e-94 349.4 244 67.2
MELO3C023597.2 Cucumis melo HOM05D003919 ORTHO05D004906 4.9e-94 349.0 242 68.2
CsaV3_7G030590 Cucumis sativus L. HOM05D003919 ORTHO05D004906 4.9e-94 349.0 242 68.2
Sed0027848 Sechium edule HOM05D003919 ORTHO05D004906 4.9e-94 349.0 242 69.0
Eucgr.J00863 Eucalyptus grandis HOM05D003919 ORTHO05D004906 6.4e-94 348.6 237 70.0
SGA_v2.0_scaffold17G08205 Striga asiatica HOM05D003919 ORTHO05D004906 6.4e-94 348.6 240 69.6
Glyma.20G003400 Glycine max HOM05D003919 ORTHO05D004906 1.1e-93 347.8 244 68.0
Ca_25292_v3 Cicer arietinum L. HOM05D003919 ORTHO05D004906 1.4e-93 347.4 240 69.2
FAN07G2510 Fragaria x ananassa HOM05D003919 ORTHO05D004906 1.4e-93 347.4 244 67.2
Psat6g099280 Pisum sativum HOM05D003919 ORTHO05D004906 1.9e-93 347.1 240 68.8
HanXRQChr12g0366421 Helianthus annuus HOM05D003919 ORTHO05D004906 1.5e-90 337.4 241 67.2
ATR0618G139 Amborella trichopoda HOM05D003919 ORTHO05D004906 2.8e-89 333.2 238 67.6
Lsat_1_v5_gn_8_31660 Lactuca sativa HOM05D003919 ORTHO05D004906 6.2e-89 332.0 244 65.2
Nitab4.5_0000405g0040 Nicotiana tabacum HOM05D003919 ORTHO05D004906 1.8e-88 330.5 224 70.1
ECA233G1217 Erigeron canadensis HOM05D003919 ORTHO05D004906 2.4e-88 330.1 258 64.0
Os04g0675101 Oryza sativa ssp. japonica HOM05D003919 ORTHO05D004906 9.0e-88 328.2 239 64.9
Peaxi162Scf00363g00329 Petunia axillaris HOM05D003919 ORTHO05D004906 1.5e-87 327.4 224 69.2
Zm00001eb066370 Zea mays HOM05D003919 ORTHO05D004906 1.5e-87 327.4 239 63.6
Nitab4.5_0003853g0020 Nicotiana tabacum HOM05D003919 ORTHO05D004906 3.4e-87 326.2 224 68.8
CDE08G0505 Ceratophyllum demersum HOM05D003919 ORTHO05D004906 1.1e-85 321.2 244 61.9
SEGI_11727 Sequoiadendron giganteum HOM05D003919 ORTHO05D004906 1.4e-85 320.9 241 63.1
TAR374G0728 Trochodendron aralioides HOM05D003919 ORTHO05D004906 1.9e-85 320.5 205 75.1
Potri.005G093000 Populus trichocarpa HOM05D003919 ORTHO05D004906 1.2e-84 317.8 252 60.7
Sabra05G0077100 Salix brachista HOM05D003919 ORTHO05D004906 2.7e-84 316.6 252 61.1
arahy.Tifrunner.gnm1.ann1.5S361I Arachis hypogaea HOM05D003919 ORTHO05D004906 1.3e-83 314.3 221 67.4
ClCG09G004560 Citrullus lanatus HOM05D003919 ORTHO05D004906 1.5e-82 310.8 225 66.7
Mapoly0175s0011 Marchantia polymorpha HOM05D003919 ORTHO05D004906 3.1e-72 276.6 248 57.3
Solyc02g014190.4 Solanum lycopersicum HOM05D003919 ORTHO05D004906 1.1e-69 268.1 241 57.3
Pp3c9_15860 Physcomitrium patens HOM05D003919 ORTHO05D004906 3.2e-69 266.5 242 54.5
AagrBONN_evm.TU.Sc2ySwM_344.4345 Anthoceros agrestis HOM05D003919 ORTHO05D004906 1.3e-65 254.6 245 52.2
FAN22G1631 Fragaria x ananassa HOM05D003919 ORTHO05D004906 5.9e-63 245.7 154 74.0
SMO164G0254 Selaginella moellendorffii HOM05D003919 ORTHO05D004906 3.8e-62 243.0 239 51.5
Oeu055859.1 Olea europaea HOM05D003919 ORTHO05D004906 3.0e-59 233.4 173 65.9
Glyma.09G282200 Glycine max HOM05D003919 ORTHO05D004906 7.4e-58 228.8 177 63.3
MCO02G364 Micromonas commoda HOM05D003919 ORTHO05D004906 6.5e-38 162.5 255 36.1
Cre01.g044850 Chlamydomonas reinhardtii HOM05D003919 ORTHO05D004906 8.0e-36 155.6 180 46.1
SEGI_14080 Sequoiadendron giganteum HOM05D003919 ORTHO05D004906 9.1e-32 142.1 130 45.4
Manes.04G066100 Manihot esculenta HOM05D003919 ORTHO05D004906 1.0e-30 138.7 260 31.9
HPP92_012909 Vanilla planifolia HOM05D003919 ORTHO05D004906 2.2e-30 137.5 145 42.1
Dinv11717 Davidia involucrata HOM05D003919 ORTHO05D004906 8.5e-30 135.6 130 45.4
Sc06g0007940 Simmondsia chinensis HOM05D003919 ORTHO05D004906 5.5e-29 132.9 130 44.6
Gohir.A12G133950 Gossypium hirsutum HOM05D003919 ORTHO05D004906 9.4e-29 132.1 130 44.6
TAR374G1487 Trochodendron aralioides HOM05D003919 ORTHO05D004906 1.6e-28 131.3 130 44.6
COL.COLO4_13755 Corchorus olitorius HOM05D003919 ORTHO05D004906 2.7e-28 130.6 130 44.6
C07p44420 Brassica napus HOM05D003919 ORTHO05D004906 4.7e-28 129.8 130 43.1
GSVIVG01014936001 Vitis vinifera HOM05D003919 ORTHO05D004906 6.1e-28 129.4 130 43.1
Lj6A719G43 Lonicera japonica HOM05D003919 ORTHO05D004906 3.0e-27 127.1 130 42.3
FAN27G1315 Fragaria x ananassa HOM05D003919 ORTHO05D004906 1.1e-13 82.0 69 56.5
SEGI_33576 Sequoiadendron giganteum HOM05D003919 ORTHO05D004906 1.4e-11 75.1 65 55.4
HPP92_012876 Vanilla planifolia HOM05D003919 ORTHO05D004906 3.7e-09 67.0 45 62.2
Phvul.003G005926 Phaseolus vulgaris HOM05D003919 ORTHO05D004906 1.2e-07 62.0 269 23.8
FAN25G1432 Fragaria x ananassa HOM05D003919 ORTHO05D004906 1.7e-06 58.2 116 36.2
Psat0s1455g0040 Pisum sativum HOM05D003919 ORTHO05D004906 5.0e-06 56.6 67 40.3


User provided reference genes

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