Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc0.152 Carica papaya HOM05D003919 ORTHO05D004906 0.0e+00 2059.6 1041 100.0
Haze_11754 Corylus avellana HOM05D003919 ORTHO05D004906 0.0e+00 1411.0 1021 68.9
Cfa008737 Carpinus fangiana HOM05D003919 ORTHO05D004906 0.0e+00 1407.5 1021 68.6
Dinv11717 Davidia involucrata HOM05D003919 ORTHO05D004906 0.0e+00 1391.3 1020 68.2
QL03p046003 Quercus lobata HOM05D003919 ORTHO05D004906 0.0e+00 1382.9 1021 67.5
Duzib132G0455 Durio zibethinus HOM05D003919 ORTHO05D004906 0.0e+00 1380.5 1022 68.5
Prupe.1G347000 Prunus persica HOM05D003919 ORTHO05D004906 0.0e+00 1379.4 1015 66.7
Manes.04G066100 Manihot esculenta HOM05D003919 ORTHO05D004906 0.0e+00 1375.1 1018 67.3
Potri.005G093000 Populus trichocarpa HOM05D003919 ORTHO05D004906 0.0e+00 1370.9 1042 66.7
RcHm_v2.0_Chr4g0446631 Rosa chinensis HOM05D003919 ORTHO05D004906 0.0e+00 1365.1 1015 67.0
COL.COLO4_13755 Corchorus olitorius HOM05D003919 ORTHO05D004906 0.0e+00 1364.4 1022 67.3
Sabra05G0077100 Salix brachista HOM05D003919 ORTHO05D004906 0.0e+00 1362.8 1026 67.3
MD16G1001800 Malus domestica HOM05D003919 ORTHO05D004906 0.0e+00 1356.7 1015 66.2
Ciclev10030469m.g Citrus clementina HOM05D003919 ORTHO05D004906 0.0e+00 1353.6 1019 65.6
FAN12G0111 Fragaria x ananassa HOM05D003919 ORTHO05D004906 0.0e+00 1351.7 1015 66.5
TWI53G0046 Tripterygium wilfordii HOM05D003919 ORTHO05D004906 0.0e+00 1344.3 1022 65.5
FvH4_4g36870 Fragaria vesca HOM05D003919 ORTHO05D004906 0.0e+00 1340.9 1015 66.0
FAN17G2968 Fragaria x ananassa HOM05D003919 ORTHO05D004906 0.0e+00 1338.9 1015 65.6
Thecc.02G160300 Theobroma cacao HOM05D003919 ORTHO05D004906 0.0e+00 1338.2 1021 66.9
Gorai.008G149000 Gossypium raimondii HOM05D003919 ORTHO05D004906 0.0e+00 1337.0 1022 66.2
Gohir.D12G137500 Gossypium hirsutum HOM05D003919 ORTHO05D004906 0.0e+00 1334.3 1022 66.0
Gohir.A12G133900 Gossypium hirsutum HOM05D003919 ORTHO05D004906 0.0e+00 1329.7 1022 65.8
CSS0046709 Camellia sinensis var. sinensis HOM05D003919 ORTHO05D004906 0.0e+00 1328.2 1021 65.5
FAN07G2510 Fragaria x ananassa HOM05D003919 ORTHO05D004906 0.0e+00 1316.2 1015 65.1
THA.LOC104819381 Tarenaya hassleriana HOM05D003919 ORTHO05D004906 0.0e+00 1308.5 1018 63.9
Dinv01184 Davidia involucrata HOM05D003919 ORTHO05D004906 0.0e+00 1297.0 1020 65.1
TAR374G1487 Trochodendron aralioides HOM05D003919 ORTHO05D004906 0.0e+00 1290.8 1028 64.1
Hund24370 Selenicereus undatus HOM05D003919 ORTHO05D004906 0.0e+00 1276.5 1024 63.0
Rhsim09G0081500 Rhododendron simsii HOM05D003919 ORTHO05D004906 0.0e+00 1262.3 1017 62.2
vmacro10895 Vaccinium macrocarpon HOM05D003919 ORTHO05D004906 0.0e+00 1262.3 1026 61.8
Actinidia04322 Actinidia chinensis HOM05D003919 ORTHO05D004906 0.0e+00 1251.1 1019 62.7
DCAR_026901 Daucus carota HOM05D003919 ORTHO05D004906 0.0e+00 1250.7 1033 61.0
AUR62017695 Chenopodium quinoa HOM05D003919 ORTHO05D004906 0.0e+00 1250.0 1019 60.6
Lj2g0026278 Lotus japonicus HOM05D003919 ORTHO05D004906 0.0e+00 1244.2 1023 61.6
Eucgr.J00863 Eucalyptus grandis HOM05D003919 ORTHO05D004906 0.0e+00 1243.8 1024 61.2
Ca_30179_v3 Cicer arietinum L. HOM05D003919 ORTHO05D004906 0.0e+00 1242.3 1026 61.2
PGR044G0490 Punica granatum HOM05D003919 ORTHO05D004906 0.0e+00 1239.6 1018 61.7
AUR62015231 Chenopodium quinoa HOM05D003919 ORTHO05D004906 0.0e+00 1237.6 1019 60.3
Lalb_Chr04g0258931 Lupinus albus HOM05D003919 ORTHO05D004906 0.0e+00 1236.5 1025 61.5
Thhalv10003499m.g Eutrema salsugineum HOM05D003919 ORTHO05D004906 0.0e+00 1234.2 1021 61.6
Sp2g24010 Schrenkiella parvula HOM05D003919 ORTHO05D004906 0.0e+00 1233.8 1044 60.0
CsaV3_7G030590 Cucumis sativus L. HOM05D003919 ORTHO05D004906 0.0e+00 1233.4 1020 60.9
Medtr1g037310 Medicago truncatula HOM05D003919 ORTHO05D004906 0.0e+00 1233.4 1026 60.4
CARHR190420 Cardamine hirsuta HOM05D003919 ORTHO05D004906 0.0e+00 1232.6 1019 61.1
MELO3C023597.2 Cucumis melo HOM05D003919 ORTHO05D004906 0.0e+00 1231.5 1023 60.9
Aa31LG11G2600 Aethionema arabicum HOM05D003919 ORTHO05D004906 0.0e+00 1228.8 1019 60.7
Cc11_g02410 Coffea canephora HOM05D003919 ORTHO05D004906 0.0e+00 1228.4 1020 61.1
TPR.G8246 Trifolium pratense HOM05D003919 ORTHO05D004906 0.0e+00 1228.4 1025 60.8
AL6G34300 Arabidopsis lyrata HOM05D003919 ORTHO05D004906 0.0e+00 1227.6 1019 60.7
Psat6g099280 Pisum sativum HOM05D003919 ORTHO05D004906 0.0e+00 1227.6 1024 60.6
Sed0027848 Sechium edule HOM05D003919 ORTHO05D004906 0.0e+00 1227.2 1023 60.1
BolC7t44964H Brassica oleracea HOM05D003919 ORTHO05D004906 0.0e+00 1226.8 1013 61.1
Peaxi162Scf00363g00321 Petunia axillaris HOM05D003919 ORTHO05D004906 0.0e+00 1226.8 1018 61.1
Sopen02g003520 Solanum pennellii HOM05D003919 ORTHO05D004906 0.0e+00 1224.9 1019 61.2
Ah.01g012290 Amaranthus hybridus HOM05D003919 ORTHO05D004906 0.0e+00 1224.2 1019 59.9
Carub.0006s2090 Capsella rubella HOM05D003919 ORTHO05D004906 0.0e+00 1221.8 1021 61.0
ClCG09G004560 Citrullus lanatus HOM05D003919 ORTHO05D004906 0.0e+00 1220.7 1016 60.1
EL10Ac9g22945 Beta vulgaris HOM05D003919 ORTHO05D004906 0.0e+00 1219.9 1019 60.3
Sc06g0007940 Simmondsia chinensis HOM05D003919 ORTHO05D004906 0.0e+00 1219.5 1026 59.7
Glyma.20G003400 Glycine max HOM05D003919 ORTHO05D004906 0.0e+00 1213.7 1029 60.0
A03p46400 Brassica napus HOM05D003919 ORTHO05D004906 0.0e+00 1211.8 1013 60.6
Nitab4.5_0023098g0010 Nicotiana tabacum HOM05D003919 ORTHO05D004906 0.0e+00 1210.7 1020 60.7
BraA03t13766Z Brassica rapa HOM05D003919 ORTHO05D004906 0.0e+00 1208.0 1013 60.5
Glyma.09G282200 Glycine max HOM05D003919 ORTHO05D004906 0.0e+00 1208.0 1031 59.7
AT5G23110 Arabidopsis thaliana HOM05D003919 ORTHO05D004906 0.0e+00 1204.5 1019 60.2
Phvul.003G005926 Phaseolus vulgaris HOM05D003919 ORTHO05D004906 0.0e+00 1204.1 1033 59.5
Nitab4.5_0000405g0040 Nicotiana tabacum HOM05D003919 ORTHO05D004906 0.0e+00 1202.6 1020 60.6
Nn4g24949 Nelumbo nucifera HOM05D003919 ORTHO05D004906 0.0e+00 1192.2 1023 58.6
Migut.J01108 Erythranthe guttata HOM05D003919 ORTHO05D004906 0.0e+00 1188.7 1021 59.5
CiPaw.05G168800 Carya illinoinensis HOM05D003919 ORTHO05D004906 0.0e+00 1174.8 1021 59.2
Oeu055858.1 Olea europaea HOM05D003919 ORTHO05D004906 0.0e+00 1170.2 988 60.2
Lj6P719T30 Lonicera japonica HOM05D003919 ORTHO05D004906 0.0e+00 1165.6 920 63.0
Solyc02g014180.2 Solanum lycopersicum HOM05D003919 ORTHO05D004906 0.0e+00 1153.3 966 60.9
Aqoxy3G04259 Aquilegia oxysepala HOM05D003919 ORTHO05D004906 0.0e+00 1146.7 1028 57.9
PSO782G3793 Papaver somniferum HOM05D003919 ORTHO05D004906 0.0e+00 1144.8 1032 55.5
ECA233G1217 Erigeron canadensis HOM05D003919 ORTHO05D004906 0.0e+00 1121.7 1026 55.4
Lsat_1_v5_gn_8_31660 Lactuca sativa HOM05D003919 ORTHO05D004906 0.0e+00 1119.8 1017 56.0
HanXRQChr12g0366421 Helianthus annuus HOM05D003919 ORTHO05D004906 0.0e+00 1116.7 1020 55.3
GSVIVG01012044001 Vitis vinifera HOM05D003919 ORTHO05D004906 0.0e+00 1078.5 1023 56.1
SGA_v2.0_scaffold17G08205 Striga asiatica HOM05D003919 ORTHO05D004906 5.0e-308 1061.2 944 57.2
ATR0618G139 Amborella trichopoda HOM05D003919 ORTHO05D004906 1.3e-300 1036.6 1029 52.6
Os04g0675200 Oryza sativa ssp. japonica HOM05D003919 ORTHO05D004906 2.6e-288 995.7 1022 50.6
Zm00001eb066370 Zea mays HOM05D003919 ORTHO05D004906 4.4e-280 968.4 1021 49.3
SEGI_31724 Sequoiadendron giganteum HOM05D003919 ORTHO05D004906 1.1e-278 963.8 1056 47.5
CDE08G1346 Ceratophyllum demersum HOM05D003919 ORTHO05D004906 3.3e-227 792.7 1016 44.6
HPP92_012877 Vanilla planifolia HOM05D003919 ORTHO05D004906 7.5e-227 791.6 1023 43.0
Gohir.A12G134051 Gossypium hirsutum HOM05D003919 ORTHO05D004906 4.8e-218 762.3 1034 46.1
AagrBONN_evm.TU.Sc2ySwM_344.4345 Anthoceros agrestis HOM05D003919 ORTHO05D004906 4.4e-211 739.2 1067 39.4
Mapoly0175s0011 Marchantia polymorpha HOM05D003919 ORTHO05D004906 9.8e-211 738.0 1054 40.5
Pp3c9_15860 Physcomitrium patens HOM05D003919 ORTHO05D004906 1.2e-208 731.1 1050 39.3
C07p44420 Brassica napus HOM05D003919 ORTHO05D004906 9.2e-193 678.3 1013 41.6
SMO164G0254 Selaginella moellendorffii HOM05D003919 ORTHO05D004906 3.8e-146 523.5 1026 33.1
ECA233G4021 Erigeron canadensis HOM05D003919 ORTHO05D004906 8.6e-82 309.7 374 47.9
ECA233G5658 Erigeron canadensis HOM05D003919 ORTHO05D004906 8.3e-77 293.1 297 51.5
ECA233G3594 Erigeron canadensis HOM05D003919 ORTHO05D004906 5.4e-76 290.4 294 51.7
GSVIVG01028587001 Vitis vinifera HOM05D003919 ORTHO05D004906 9.5e-73 279.6 283 55.8
ECA233G4978 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.6e-72 278.9 277 53.4
HanXRQChr08g0218771 Helianthus annuus HOM05D003919 ORTHO05D004906 4.4e-70 270.8 248 56.0
ECA233G5805 Erigeron canadensis HOM05D003919 ORTHO05D004906 1.1e-68 266.2 288 49.0
HanXRQChr08g0218781 Helianthus annuus HOM05D003919 ORTHO05D004906 1.2e-67 262.7 246 55.7
MCO02G364 Micromonas commoda HOM05D003919 ORTHO05D004906 1.1e-60 239.6 1149 24.2
Atru.chr11.1166 Acer truncatum HOM05D003919 ORTHO05D004906 3.6e-48 198.0 154 66.2
ECA233G0722 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-17 96.3 87 48.3
Atru.chr11.1141 Acer truncatum HOM05D002456 ORTHO05D002994 3.9e-10 71.6 61 55.7
SGA_v2.0_scaffold2647G54168 Striga asiatica HOM05D003919 ORTHO05D004906 4.1e-07 61.6 42 69.0
Solyc02g014190.4 Solanum lycopersicum HOM05D003919 ORTHO05D004906 5.9e-06 57.8 421 21.9


User provided reference genes

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