Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c47956 Carica papaya HOM05D004841 ORTHO05D005874 2.0e-55 218.8 107 100.0
CiPaw.09G120900 Carya illinoinensis HOM05D004841 ORTHO05D005874 5.4e-40 167.5 98 75.5
THA.LOC104821761 Tarenaya hassleriana HOM05D004841 ORTHO05D005874 1.2e-39 166.4 97 78.4
CiPaw.10G089600 Carya illinoinensis HOM05D004841 ORTHO05D005874 4.6e-39 164.5 98 70.4
Haze_05641 Corylus avellana HOM05D004841 ORTHO05D005874 1.3e-38 162.9 98 74.5
Cfa000914 Carpinus fangiana HOM05D004841 ORTHO05D005874 2.3e-38 162.2 98 73.5
Sp5g22530 Schrenkiella parvula HOM05D004841 ORTHO05D005874 3.0e-38 161.8 97 75.3
BcaB05g24290 Brassica carinata HOM05D004841 ORTHO05D005874 6.6e-38 160.6 97 75.3
A07p34060 Brassica napus HOM05D004841 ORTHO05D005874 6.6e-38 160.6 97 74.2
C06p42730 Brassica napus HOM05D004841 ORTHO05D005874 6.6e-38 160.6 97 74.2
C06p42780 Brassica napus HOM05D004841 ORTHO05D005874 6.6e-38 160.6 97 74.2
BolC6t39162H Brassica oleracea HOM05D004841 ORTHO05D005874 6.6e-38 160.6 97 74.2
BraA02t06489Z Brassica rapa HOM05D004841 ORTHO05D005874 6.6e-38 160.6 97 74.2
C02p23090 Brassica napus HOM05D004841 ORTHO05D005874 8.6e-38 160.2 97 74.2
BolC2t08451H Brassica oleracea HOM05D004841 ORTHO05D005874 8.6e-38 160.2 97 74.2
AL2G19660 Arabidopsis lyrata HOM05D004841 ORTHO05D005874 1.5e-37 159.5 97 77.3
Thhalv10018816m.g Eutrema salsugineum HOM05D004841 ORTHO05D005874 1.5e-37 159.5 97 73.2
BcaB03g15189 Brassica carinata HOM05D004841 ORTHO05D005874 2.5e-37 158.7 97 74.2
BraA07t31032Z Brassica rapa HOM05D004841 ORTHO05D005874 3.3e-37 158.3 97 73.2
A02p14280 Brassica napus HOM05D004841 ORTHO05D005874 4.3e-37 157.9 97 73.2
AT1G65030 Arabidopsis thaliana HOM05D004841 ORTHO05D005874 7.3e-37 157.1 97 75.3
Aa31LG2G2230 Aethionema arabicum HOM05D004841 ORTHO05D005874 3.6e-36 154.8 97 73.2
Manes.17G073300 Manihot esculenta HOM05D004841 ORTHO05D005874 4.7e-36 154.5 100 75.0
QL05p055481 Quercus lobata HOM05D004841 ORTHO05D005874 4.7e-36 154.5 98 72.4
Carub.0002s1024 Capsella rubella HOM05D004841 ORTHO05D005874 8.1e-36 153.7 97 73.2
CARHR056500 Cardamine hirsuta HOM05D004841 ORTHO05D005874 1.8e-35 152.5 97 73.2
Potri.012G107400 Populus trichocarpa HOM05D004841 ORTHO05D005874 2.4e-35 152.1 104 74.0
Sabra13G0019700 Salix brachista HOM05D000092 ORTHO05D005874 2.4e-35 152.1 104 74.0
Duzib235G0160 Durio zibethinus HOM05D004841 ORTHO05D005874 3.1e-35 151.8 97 73.2
CSS0019612 Camellia sinensis var. sinensis HOM05D004841 ORTHO05D005874 4.0e-35 151.4 99 71.7
CSS0027900 Camellia sinensis var. sinensis HOM05D004841 ORTHO05D005874 4.0e-35 151.4 99 71.7
Sabra13G0018400 Salix brachista HOM05D004841 ORTHO05D004358 2.0e-34 149.1 104 73.1
GSVIVG01034157001 Vitis vinifera HOM05D004841 ORTHO05D005874 2.6e-34 148.7 99 70.7
Ciclev10015824m.g Citrus clementina HOM05D004841 ORTHO05D005874 3.4e-34 148.3 98 71.4
Gohir.D10G043800 Gossypium hirsutum HOM05D004841 ORTHO05D005874 7.6e-34 147.1 97 71.1
MBI02_g29870_MAGBIO Magnolia biondii HOM05D004841 ORTHO05D005874 7.6e-34 147.1 100 68.0
Gohir.A10G042800 Gossypium hirsutum HOM05D004841 ORTHO05D005874 9.9e-34 146.7 97 70.1
Gorai.011G046600 Gossypium raimondii HOM05D004841 ORTHO05D005874 9.9e-34 146.7 97 71.1
Actinidia01573 Actinidia chinensis HOM05D004841 ORTHO05D005874 1.3e-33 146.4 99 66.7
Dinv32222 Davidia involucrata HOM05D004841 ORTHO05D005874 1.3e-33 146.4 99 67.7
PGR031G1170 Punica granatum HOM05D004841 ORTHO05D005874 1.3e-33 146.4 97 73.2
COL.COLO4_31030 Corchorus olitorius HOM05D004841 ORTHO05D005874 1.7e-33 146.0 97 68.0
Lsat_1_v5_gn_4_29561 Lactuca sativa HOM05D004841 ORTHO05D005874 1.7e-33 146.0 99 65.7
RcHm_v2.0_Chr5g0014571 Rosa chinensis HOM05D004841 ORTHO05D005874 1.7e-33 146.0 98 68.4
Atru.chr10.1099 Acer truncatum HOM05D004841 ORTHO05D005874 2.2e-33 145.6 97 68.0
Eucgr.E02427 Eucalyptus grandis HOM05D004841 ORTHO05D005874 2.9e-33 145.2 105 70.5
Hma1.2p1_0594F.1_g185890 Hydrangea macrophylla HOM05D004841 ORTHO05D005874 3.8e-33 144.8 99 67.7
TWI63G0939 Tripterygium wilfordii HOM05D004841 ORTHO05D005874 4.9e-33 144.4 96 68.8
Sed0021741 Sechium edule HOM05D004841 ORTHO05D005874 6.4e-33 144.1 100 65.0
Thecc.06G146500 Theobroma cacao HOM05D004841 ORTHO05D005874 6.4e-33 144.1 97 70.1
ClCG01G024810 Citrullus lanatus HOM05D004841 ORTHO05D005874 8.4e-33 143.7 100 64.0
FAN21G1690 Fragaria x ananassa HOM05D004841 ORTHO05D005874 8.4e-33 143.7 98 67.3
MD05G1280700 Malus domestica HOM05D004841 ORTHO05D005874 1.4e-32 142.9 98 65.3
FAN11G3214 Fragaria x ananassa HOM05D004841 ORTHO05D005874 2.4e-32 142.1 98 66.3
FAN16G2733 Fragaria x ananassa HOM05D004841 ORTHO05D005874 2.4e-32 142.1 98 66.3
FAN25G3271 Fragaria x ananassa HOM05D004841 ORTHO05D005874 2.4e-32 142.1 98 66.3
FvH4_3g05180 Fragaria vesca HOM05D004841 ORTHO05D005874 3.2e-32 141.7 98 66.3
MD10G1259100 Malus domestica HOM05D004841 ORTHO05D005874 3.2e-32 141.7 100 64.0
FAN16G1445 Fragaria x ananassa HOM05D004841 ORTHO05D005874 5.4e-32 141.0 98 65.3
Medtr2g049300 Medicago truncatula HOM05D004841 ORTHO05D005874 5.4e-32 141.0 95 68.4
CANSAT11G1247 Cannabis sativa HOM05D004841 ORTHO05D005874 7.1e-32 140.6 100 63.0
TWI34G1122 Tripterygium wilfordii HOM05D004841 ORTHO05D005874 7.1e-32 140.6 96 68.8
Cc02_g29720 Coffea canephora HOM05D004841 ORTHO05D005874 2.7e-31 138.7 103 62.1
Migut.M00886 Erythranthe guttata HOM05D004841 ORTHO05D005874 3.5e-31 138.3 97 63.9
Psat1g020080 Pisum sativum HOM05D004841 ORTHO05D005874 3.5e-31 138.3 93 71.0
Sc02g0001540 Simmondsia chinensis HOM05D004841 ORTHO05D005874 3.5e-31 138.3 98 64.3
Prupe.4G084200 Prunus persica HOM05D004841 ORTHO05D005874 4.6e-31 137.9 98 62.2
MSTRG.7507 Avicennia marina HOM05D004841 ORTHO05D005874 6.0e-31 137.5 99 62.6
MELO3C007114.2 Cucumis melo HOM05D004841 ORTHO05D005874 6.0e-31 137.5 100 62.0
Rhsim13G0116700 Rhododendron simsii HOM05D004841 ORTHO05D005874 6.0e-31 137.5 99 64.6
TPR.G29935 Trifolium pratense HOM05D004841 ORTHO05D005874 1.3e-30 136.3 93 69.9
CsaV3_6G051930 Cucumis sativus L. HOM05D004841 ORTHO05D005874 3.0e-30 135.2 100 61.0
vmacro03353 Vaccinium macrocarpon HOM05D004841 ORTHO05D005874 3.0e-30 135.2 103 63.1
Peaxi162Scf00465g00119 Petunia axillaris HOM05D004841 ORTHO05D005874 3.9e-30 134.8 103 62.1
TAR628G1076 Trochodendron aralioides HOM05D004841 ORTHO05D005874 3.9e-30 134.8 98 67.3
Ca_03447_v3 Cicer arietinum L. HOM05D004841 ORTHO05D005874 6.6e-30 134.0 93 65.6
arahy.Tifrunner.gnm1.ann1.4L8DWS Arachis hypogaea HOM05D004841 ORTHO05D005874 8.7e-30 133.7 95 62.1
Oeu013128.1 Olea europaea HOM05D004841 ORTHO05D005874 8.7e-30 133.7 99 58.6
Dinv21532 Davidia involucrata HOM05D004841 ORTHO05D005874 1.1e-29 133.3 85 72.9
PSO017G5522 Papaver somniferum HOM05D004841 ORTHO05D005874 1.5e-29 132.9 95 61.1
SGA_v2.0_scaffold146G36131 Striga asiatica HOM05D004841 ORTHO05D005874 1.9e-29 132.5 99 61.6
arahy.Tifrunner.gnm1.ann1.0DR3QG Arachis hypogaea HOM05D004841 ORTHO05D005874 2.5e-29 132.1 95 61.1
Lj2A321T65 Lonicera japonica HOM05D004841 ORTHO05D005874 3.3e-29 131.7 103 60.2
Lalb_Chr11g0073321 Lupinus albus HOM05D004841 ORTHO05D005874 3.3e-29 131.7 92 65.2
Hund20587 Selenicereus undatus HOM05D004841 ORTHO05D005874 3.3e-29 131.7 100 61.0
DCAR_027897 Daucus carota HOM05D004841 ORTHO05D005874 4.3e-29 131.3 94 68.1
arahy.Tifrunner.gnm1.ann1.V1DCF9 Arachis hypogaea HOM05D004841 ORTHO05D005874 5.6e-29 131.0 95 60.0
AUR62026924 Chenopodium quinoa HOM05D004841 ORTHO05D005874 7.3e-29 130.6 100 60.0
arahy.Tifrunner.gnm1.ann1.9IA9LY Arachis hypogaea HOM05D004841 ORTHO05D005874 1.6e-28 129.4 95 58.9
PSO541G1633 Papaver somniferum HOM05D004841 ORTHO05D005874 1.6e-28 129.4 95 61.1
PSO675G7289 Papaver somniferum HOM05D004841 ORTHO05D005874 1.6e-28 129.4 95 61.1
Nn3g20436 Nelumbo nucifera HOM05D004841 ORTHO05D005874 2.1e-28 129.0 98 63.3
Nitab4.5_0004020g0010 Nicotiana tabacum HOM05D004841 ORTHO05D005874 2.8e-28 128.6 99 55.6
PGSC0003DMG400022420 Solanum tuberosum HOM05D004841 ORTHO05D005874 3.6e-28 128.3 103 58.3
Sopen02g023650 Solanum pennellii HOM05D004841 ORTHO05D005874 4.8e-28 127.9 99 57.6
Lj6g0003285 Lotus japonicus HOM05D004841 ORTHO05D005874 6.2e-28 127.5 93 62.4
SHI02861 Sapria himalayana HOM05D004841 ORTHO05D005874 6.2e-28 127.5 100 59.0
Solyc02g078830.4 Solanum lycopersicum HOM05D004841 ORTHO05D005874 8.1e-28 127.1 99 57.6
HanXRQChr17g0564621 Helianthus annuus HOM05D004841 ORTHO05D005874 1.1e-27 126.7 98 58.2
Nitab4.5_0000501g0020 Nicotiana tabacum HOM05D004841 ORTHO05D005874 2.4e-27 125.6 99 55.6
Ah.08g211520 Amaranthus hybridus HOM05D004841 ORTHO05D005874 9.0e-27 123.6 100 59.0
EL10Ac7g16662 Beta vulgaris HOM05D004841 ORTHO05D005874 9.0e-27 123.6 100 61.0
ECA234G4271 Erigeron canadensis HOM05D004841 ORTHO05D005874 1.5e-26 122.9 98 58.2
Aqoxy7G03441 Aquilegia oxysepala HOM05D004841 ORTHO05D005874 3.4e-26 121.7 97 59.8
Aqoxy5G03944 Aquilegia oxysepala HOM05D004841 ORTHO05D005874 4.5e-26 121.3 97 59.8
CDE07G1158 Ceratophyllum demersum HOM05D004841 ORTHO05D005874 9.9e-26 120.2 93 58.1
Glyma.15G195000 Glycine max HOM05D004841 ORTHO05D005874 1.1e-24 116.7 91 61.5
Glyma.09G086200 Glycine max HOM05D004841 ORTHO05D005874 2.4e-24 115.5 91 60.4
HPP92_012189 Vanilla planifolia HOM05D004841 ORTHO05D005874 4.2e-24 114.8 106 51.9
BcaNung05075 Brassica carinata HOM05D004841 ORTHO05D005874 7.1e-24 114.0 97 58.8
Phvul.009G215400 Phaseolus vulgaris HOM05D004841 ORTHO05D005874 1.2e-23 113.2 89 61.8
BcaNung05072 Brassica carinata HOM05D004841 ORTHO05D005874 2.7e-23 112.1 68 75.0
VMungo1309G2918 Vigna mungo HOM05D004841 ORTHO05D005874 1.0e-22 110.2 89 59.6
BcaNung05071 Brassica carinata HOM05D004841 ORTHO05D005874 2.3e-22 109.0 68 73.5
ATR0772G214 Amborella trichopoda HOM05D004841 ORTHO05D005874 5.1e-22 107.8 106 45.3
SalBow8G2637 Salvia bowleyana HOM05D004841 ORTHO05D005874 1.6e-20 102.8 73 64.4
AUR62042056 Chenopodium quinoa HOM05D004841 ORTHO05D005874 6.0e-15 84.3 68 58.8
SEGI_08519 Sequoiadendron giganteum HOM05D004841 ORTHO05D005874 7.9e-15 84.0 99 40.4
Os12g0615900 Oryza sativa ssp. japonica HOM05D004841 ORTHO05D005874 1.9e-13 79.3 105 40.0
Zm00001eb328580 Zea mays HOM05D004841 ORTHO05D005874 5.6e-13 77.8 99 41.4
Cpa.g.sc17.34 Carica papaya HOM05D004841 ORTHO05D005874 1.3e-12 76.6 36 100.0
Cre03.g205800 Chlamydomonas reinhardtii HOM05D004841 ORTHO05D005874 1.2e-10 70.1 97 38.1
Mapoly0001s0498 Marchantia polymorpha HOM05D004841 ORTHO05D005874 1.7e-09 66.2 101 31.7
SMO358G0291 Selaginella moellendorffii HOM05D004841 ORTHO05D005874 1.7e-09 66.2 99 37.4
VMungo0331G1481 Vigna mungo HOM05D004841 ORTHO05D005874 2.5e-08 62.4 62 50.0
CBR_g4467 Chara braunii HOM05D004841 ORTHO05D005874 3.2e-08 62.0 83 37.3
unitig_749.g13802 Utricularia gibba HOM05D004841 ORTHO05D005874 7.1e-08 60.8 39 64.1


User provided reference genes

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